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Description : splicing factor (WSL4)
Gene families : OG0011209 (Archaeplastida) Phylogenetic Tree(s): OG0011209_tree ,
OG_05_0011067 (LandPlants) Phylogenetic Tree(s): OG_05_0011067_tree ,
OG_06_0011718 (SeedPlants) Phylogenetic Tree(s): OG_06_0011718_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_17873 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_762282g0010 | No alias | splicing factor (WSL4) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Neighborhood |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| MF | GO:0042802 | identical protein binding | IEP | Neighborhood |
| MF | GO:0042803 | protein homodimerization activity | IEP | Neighborhood |
| BP | GO:0046149 | pigment catabolic process | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0047746 | chlorophyllase activity | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| BP | GO:0051186 | cofactor metabolic process | IEP | Neighborhood |
| BP | GO:0051187 | cofactor catabolic process | IEP | Neighborhood |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0060590 | ATPase regulator activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 212 | 261 |
| IPR002885 | Pentatricopeptide_repeat | 148 | 191 |
| IPR002885 | Pentatricopeptide_repeat | 494 | 541 |
| IPR002885 | Pentatricopeptide_repeat | 317 | 366 |
| IPR002885 | Pentatricopeptide_repeat | 562 | 609 |
| IPR002885 | Pentatricopeptide_repeat | 422 | 471 |
| IPR002885 | Pentatricopeptide_repeat | 383 | 415 |
| IPR002885 | Pentatricopeptide_repeat | 278 | 310 |
| No external refs found! |