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Description : Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana (sp|q9ltv8|pp224_arath : 669.0)
Gene families : OG0031195 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0029117 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027562 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_18176 | |
| Cluster | HCCA: Cluster_257 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_113413g0020 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015696 | ammonium transport | IEP | Neighborhood |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Neighborhood |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| BP | GO:0046149 | pigment catabolic process | IEP | Neighborhood |
| MF | GO:0047746 | chlorophyllase activity | IEP | Neighborhood |
| BP | GO:0051187 | cofactor catabolic process | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 556 | 579 |
| IPR002885 | Pentatricopeptide_repeat | 455 | 477 |
| IPR002885 | Pentatricopeptide_repeat | 279 | 325 |
| IPR002885 | Pentatricopeptide_repeat | 481 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 177 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 379 | 417 |
| IPR032867 | DYW_dom | 654 | 778 |
| No external refs found! |