Description : pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_18512 | |
Cluster | HCCA: Cluster_325 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00230630 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00021p00242180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.03 | Archaeplastida | |
AT3G10710 | RHS12 | root hair specific 12 | 0.04 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT4G02300 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT4G33220 | PME44, ATPME44 | pectin methylesterase 44 | 0.03 | Archaeplastida | |
AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G49180 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT5G51500 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G53370 | ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | 0.04 | Archaeplastida | |
AT5G64640 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
GSVIVT01017687001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01023135001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01037349001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_21388 | No alias | pectin methylesterase | 0.07 | Archaeplastida | |
Gb_24564 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os01g13320.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g65790.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os02g18650.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os06g09340.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os07g47830.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os11g07090.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os11g08750.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_10434786g0010 | No alias | No annotation | 0.03 | Archaeplastida | |
MA_133919g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_18093g0010 | No alias | Pectinesterase 2.1 OS=Solanum lycopersicum... | 0.03 | Archaeplastida | |
MA_2017g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_2253g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
MA_86577g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_931259g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_96515g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Mp8g09330.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.03 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo114014 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
Smo154356 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Smo89509 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc01g099960.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc02g080200.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083840.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc09g075330.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc09g075350.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e008055_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e026790_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006873 | cellular ion homeostasis | IEP | Neighborhood |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0019725 | cellular homeostasis | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0030003 | cellular cation homeostasis | IEP | Neighborhood |
BP | GO:0030026 | cellular manganese ion homeostasis | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
MF | GO:0043531 | ADP binding | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Neighborhood |
BP | GO:0048878 | chemical homeostasis | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0050801 | ion homeostasis | IEP | Neighborhood |
BP | GO:0051179 | localization | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0055065 | metal ion homeostasis | IEP | Neighborhood |
BP | GO:0055071 | manganese ion homeostasis | IEP | Neighborhood |
BP | GO:0055076 | transition metal ion homeostasis | IEP | Neighborhood |
BP | GO:0055080 | cation homeostasis | IEP | Neighborhood |
BP | GO:0055082 | cellular chemical homeostasis | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
BP | GO:0098771 | inorganic ion homeostasis | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
No external refs found! |