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  5. Gb_18566

Gb_18566


Description : transcription factor (AS2/LOB). gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000749 (Archaeplastida) Phylogenetic Tree(s): OG0000749_tree ,
OG_05_0000596 (LandPlants) Phylogenetic Tree(s): OG_05_0000596_tree ,
OG_06_0000576 (SeedPlants) Phylogenetic Tree(s): OG_06_0000576_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18566
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008812001 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
GSVIVT01022329001 No alias Solute transport.carrier-mediated transport.APC... 0.01 Archaeplastida
LOC_Os01g42234.1 No alias gamma-aminobutyric acid transporter (GABP) 0.01 Archaeplastida
LOC_Os01g71720.1 No alias gamma-aminobutyric acid transporter (GABP) 0.01 Archaeplastida
MA_10426763g0010 No alias Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.03 Archaeplastida
Smo439119 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
Zm00001e018674_P001 No alias gamma-aminobutyric acid transporter (GABP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004883 LOB 2 54
IPR002293 AA/rel_permease1 130 586
No external refs found!