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  5. Gb_18608

Gb_18608


Description : NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Cycas taitungensis (sp|p0cc53|nu2c2_cycta : 122.0)


Gene families : OG0001688 (Archaeplastida) Phylogenetic Tree(s): OG0001688_tree ,
OG_05_0001178 (LandPlants) Phylogenetic Tree(s): OG_05_0001178_tree ,
OG_06_0000636 (SeedPlants) Phylogenetic Tree(s): OG_06_0000636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18608
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00105080 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.06 Archaeplastida
AMTR_s00543p00012290 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.07 Archaeplastida
ATCG00890 NDHB.1 NADH-Ubiquinone/plastoquinone (complex I) protein 0.19 Archaeplastida
ATCG01250 NDHB.2 NADH-Ubiquinone/plastoquinone (complex I) protein 0.19 Archaeplastida
LOC_Os04g16854.1 No alias component NdhB of NDH membrane subcomplex M 0.02 Archaeplastida
LOC_Os07g25004.1 No alias component NdhB of NDH membrane subcomplex M 0.23 Archaeplastida
LOC_Os08g15248.1 No alias component NdhB of NDH membrane subcomplex M 0.23 Archaeplastida
Smo137726 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.14 Archaeplastida
Solyc00g500146.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.18 Archaeplastida
Solyc03g122010.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.22 Archaeplastida
Solyc06g009580.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g050069.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.23 Archaeplastida
Solyc09g050070.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.22 Archaeplastida
Solyc09g061460.3.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.05 Archaeplastida
Solyc10g061887.1.1 No alias component NdhB of NDH membrane subcomplex M 0.25 Archaeplastida
Solyc11g021090.3.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.21 Archaeplastida
Solyc11g021110.3.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 Archaeplastida
Solyc12g033020.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.15 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 1 79
No external refs found!