AT2G33290 (ATSUVH2, SDG3, SUVH2)


Aliases : ATSUVH2, SDG3, SUVH2

Description : SU(VAR)3-9 homolog 2


Gene families : OG0000257 (Archaeplastida) Phylogenetic Tree(s): OG0000257_tree ,
OG_05_0000718 (LandPlants) Phylogenetic Tree(s): OG_05_0000718_tree ,
OG_06_0003509 (SeedPlants) Phylogenetic Tree(s): OG_06_0003509_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G33290
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre02.g089200 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.01 Archaeplastida
Gb_41440 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Solyc10g077070.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Solyc12g096990.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e009564_P001 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e009735_P001 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005720 nuclear heterochromatin IDA Interproscan
BP GO:0009640 photomorphogenesis RCA Interproscan
BP GO:0016567 protein ubiquitination RCA Interproscan
BP GO:0016571 histone methylation IDA Interproscan
BP GO:0016571 histone methylation RCA Interproscan
BP GO:0016579 protein deubiquitination RCA Interproscan
BP GO:0040029 regulation of gene expression, epigenetic IMP Interproscan
BP GO:0040029 regulation of gene expression, epigenetic TAS Interproscan
MF GO:0042054 histone methyltransferase activity ISS Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009631 cold acclimation IEP Neighborhood
CC GO:0010008 endosome membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0030904 retromer complex IEP Neighborhood
CC GO:0031902 late endosome membrane IEP Neighborhood
BP GO:0032392 DNA geometric change IEP Neighborhood
BP GO:0032508 DNA duplex unwinding IEP Neighborhood
CC GO:0032585 multivesicular body membrane IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043621 protein self-association IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 390 487
IPR001214 SET_dom 506 638
IPR003105 SRA_YDG 206 358
No external refs found!