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  5. Gb_19735

Gb_19735


Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana (sp|q84p21|4cll5_arath : 488.0)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0000459 (LandPlants) Phylogenetic Tree(s): OG_05_0000459_tree ,
OG_06_0013672 (SeedPlants) Phylogenetic Tree(s): OG_06_0013672_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19735
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00213640 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.03 Archaeplastida
GSVIVT01001827001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.03 Archaeplastida
Pp3c8_730V3.1 No alias acyl-CoA synthetase 5 0.02 Archaeplastida
Smo171251 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e013798_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 42 443
IPR025110 AMP-bd_C 452 527
No external refs found!