Gb_20097

Description : 3-ketoacyl-CoA synthase (KCS)

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0000139 (LandPlants) Phylogenetic Tree(s): OG_05_0000139_tree ,
OG_06_0000189 (SeedPlants) Phylogenetic Tree(s): OG_06_0000189_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20097
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00267760	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00079p00192440	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AT1G25450	KCS5, CER60	3-ketoacyl-CoA synthase 5	0.03	Archaeplastida
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.06	Archaeplastida
AT2G26250	KCS10, FDH	3-ketoacyl-CoA synthase 10	0.05	Archaeplastida
GSVIVT01005975001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
LOC_Os02g56860.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os03g06705.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g08360.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g12030.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os05g49290.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os06g14810.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
LOC_Os06g39750.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os09g19650.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_76149g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Mp2g20220.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Pp3c10_2580V3.1	No alias	3-ketoacyl-CoA synthase 11	0.02	Archaeplastida
Smo79947	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
Solyc05g009280.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc06g065560.2.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e000593_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e004773_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e016197_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e033922_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e034732_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
BP	GO:0006090	pyruvate metabolic process	IEP	Neighborhood
BP	GO:0006096	glycolytic process	IEP	Neighborhood
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006757	ATP generation from ADP	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009166	nucleotide catabolic process	IEP	Neighborhood
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0042866	pyruvate biosynthetic process	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0046031	ADP metabolic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0046939	nucleotide phosphorylation	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	408	488
IPR013601	FAE1_typ3_polyketide_synth	102	391

External Links

No external refs found!

Gb_20097

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation