1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_20129

Gb_20129


Description : Photosystem II protein D1 OS=Zygnema circumcarinatum (sp|q32rm3|psba_zygcr : 115.0)


Gene families : OG0001158 (Archaeplastida) Phylogenetic Tree(s): OG0001158_tree ,
OG_05_0000799 (LandPlants) Phylogenetic Tree(s): OG_05_0000799_tree ,
OG_06_0000883 (SeedPlants) Phylogenetic Tree(s): OG_06_0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20129
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270980 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 Archaeplastida
AMTR_s00071p00011330 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 Archaeplastida
AMTR_s00090p00098500 No alias Photosystem II protein D1 OS=Nephroselmis olivacea 0.04 Archaeplastida
AMTR_s00172p00027480 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.06 Archaeplastida
AMTR_s00172p00030370 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.06 Archaeplastida
AMTR_s00172p00038240 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.06 Archaeplastida
AMTR_s00172p00040120 No alias Photosystem II protein D1 OS=Amborella trichopoda 0.06 Archaeplastida
AMTR_s00390p00002060 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 Archaeplastida
ATCG00020 PSBA photosystem II reaction center protein A 0.1 Archaeplastida
GSVIVT01016441001 No alias Photosystem II protein D1 OS=Vitis vinifera 0.06 Archaeplastida
LOC_Os08g35420.1 No alias component PsbA/D1 of PS-II reaction center complex 0.03 Archaeplastida
LOC_Os10g21192.1 No alias component PsbA/D1 of PS-II reaction center complex 0.13 Archaeplastida
LOC_Os12g19580.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.12 Archaeplastida
MA_166883g0010 No alias Photosystem II protein D1 OS=Vicia faba... 0.02 Archaeplastida
Mp1g09910.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.08 Archaeplastida
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.08 Archaeplastida
Mp5g10950.1 No alias No annotation 0.07 Archaeplastida
Smo139195 No alias Photosystem II protein D1 OS=Phalaenopsis aphrodite... 0.13 Archaeplastida
Smo236852 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.13 Archaeplastida
Solyc00g500130.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 Archaeplastida
Solyc00g500200.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 Archaeplastida
Solyc00g500296.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 Archaeplastida
Solyc00g500329.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 Archaeplastida
Solyc02g021290.1.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.04 Archaeplastida
Solyc05g016120.2.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc11g030830.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g039030.1.1 No alias Photosystem II protein D1 OS=Oltmannsiellopsis viridis... 0.05 Archaeplastida
Zm00001e036844_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.06 Archaeplastida
Zm00001e042113_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.1 Archaeplastida
Zm00001e042176_P001 No alias component PsbA/D1 of PS-II reaction center complex 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 62 110
No external refs found!