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Gb_20180


Description : Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana (sp|q84th4|sr45a_arath : 126.0)


Gene families : OG0001100 (Archaeplastida) Phylogenetic Tree(s): OG0001100_tree ,
OG_05_0001443 (LandPlants) Phylogenetic Tree(s): OG_05_0001443_tree ,
OG_06_0001574 (SeedPlants) Phylogenetic Tree(s): OG_06_0001574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20180
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01005197001 No alias Serine/arginine-rich splicing factor SR45a... 0.06 Archaeplastida
GSVIVT01024805001 No alias Serine/arginine-rich splicing factor SR45a... 0.03 Archaeplastida
Gb_38929 No alias Serine/arginine-rich splicing factor SR45a... 0.05 Archaeplastida
Gb_39431 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g15890.1 No alias Serine/arginine-rich splicing factor SR45a... 0.2 Archaeplastida
LOC_Os06g50890.1 No alias Serine/arginine-rich splicing factor SR45a... 0.02 Archaeplastida
LOC_Os08g29650.1 No alias Serine/arginine-rich splicing factor SR45a... 0.02 Archaeplastida
MA_10435789g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_112005g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_125930g0010 No alias Serine/arginine-rich splicing factor SR45a... 0.02 Archaeplastida
Pp3c18_16140V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Pp3c1_27480V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.06 Archaeplastida
Solyc03g033310.4.1 No alias Serine/arginine-rich splicing factor SR45a... 0.02 Archaeplastida
Zm00001e013302_P002 No alias Serine/arginine-rich splicing factor SR45a... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 44 113
No external refs found!