Gb_20302

Description : effector receptor (NLR)

Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0000221 (SeedPlants) Phylogenetic Tree(s): OG_06_0000221_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20302
Cluster	HCCA: Cluster_159

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00060p00214220	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
AMTR_s00085p00123400	evm_27.TU.AmTr_v1...	TMV resistance protein N OS=Nicotiana glutinosa	0.02	Archaeplastida
AT1G31540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT1G56510	WRR4, ADR2	Disease resistance protein (TIR-NBS-LRR class)	0.04	Archaeplastida
AT1G63750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT1G63880	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT1G65850	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT1G72900	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.02	Archaeplastida
AT2G20142	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.03	Archaeplastida
AT3G04210	No alias	Disease resistance protein (TIR-NBS class)	0.05	Archaeplastida
AT3G04220	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT3G25505	No alias	No description available	0.05	Archaeplastida
AT3G44400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT3G44480	cog1, RPP1	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT3G44630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT4G08450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT4G14370	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT5G18360	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G38350	No alias	Disease resistance protein (NBS-LRR class) family	0.03	Archaeplastida
AT5G41550	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G41740	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G41750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT5G46450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G46470	RPS6	disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G46520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Archaeplastida
AT5G51630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G58120	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
GSVIVT01012796001	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01022990001	No alias	External stimuli response.biotic stress.pathogen...	0.02	Archaeplastida
GSVIVT01025907001	No alias	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
GSVIVT01026003001	No alias	External stimuli response.biotic stress.pathogen...	0.05	Archaeplastida
GSVIVT01029009001	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01036294001	No alias	External stimuli response.biotic stress.pathogen...	0.04	Archaeplastida
GSVIVT01036405001	No alias	External stimuli response.biotic stress.pathogen...	0.03	Archaeplastida
Gb_04748	No alias	effector receptor (NLR)	0.05	Archaeplastida
Gb_07308	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_38841	No alias	effector receptor (NLR)	0.04	Archaeplastida
Gb_40939	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_516333g0010	No alias	effector receptor (NLR)	0.04	Archaeplastida
Solyc01g066020.3.1	No alias	effector receptor (NLR)	0.02	Archaeplastida
Solyc01g102880.3.1	No alias	effector receptor (NLR)	0.03	Archaeplastida
Solyc05g007850.2.1	No alias	effector receptor (NLR)	0.02	Archaeplastida
Solyc07g052780.3.1	No alias	effector receptor (NLR)	0.02	Archaeplastida
Solyc09g092410.4.1	No alias	effector receptor (NLR)	0.04	Archaeplastida
Solyc12g096880.3.1	No alias	effector receptor (NLR)	0.06	Archaeplastida
Zm00001e035278_P001	No alias	effector receptor (NLR)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Neighborhood
BP	GO:0006528	asparagine metabolic process	IEP	Neighborhood
BP	GO:0006529	asparagine biosynthetic process	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	304	531
IPR000157	TIR_dom	124	289
IPR000157	TIR_dom	1220	1355
IPR001611	Leu-rich_rpt	708	730

External Links

No external refs found!

Gb_20302

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation