1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_20479

Gb_20479


Description : Patellin-6 OS=Arabidopsis thaliana (sp|q9scu1|patl6_arath : 491.0)


Gene families : OG0000809 (Archaeplastida) Phylogenetic Tree(s): OG0000809_tree ,
OG_05_0000939 (LandPlants) Phylogenetic Tree(s): OG_05_0000939_tree ,
OG_06_0008933 (SeedPlants) Phylogenetic Tree(s): OG_06_0008933_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20479
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00086020 evm_27.TU.AmTr_v1... Patellin-6 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00067p00033540 evm_27.TU.AmTr_v1... Patellin-4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00070p00121170 evm_27.TU.AmTr_v1... Patellin-3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G22530 PATL2 PATELLIN 2 0.02 Archaeplastida
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 Archaeplastida
AT4G09160 No alias SEC14 cytosolic factor family protein / phosphoglyceride... 0.04 Archaeplastida
LOC_Os01g65380.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g35460.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp4g16700.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g16720.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo90159 No alias Patellin-6 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc09g025230.4.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e019109_P003 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e031729_P005 No alias Patellin-5 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR011074 CRAL/TRIO_N_dom 168 209
IPR001251 CRAL-TRIO_dom 236 392
No external refs found!