Coexpression cluster: Cluster_95 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009058 biosynthetic process 10.26% (8/78) 2.2 0.000356 0.006828
GO:0043170 macromolecule metabolic process 16.67% (13/78) 1.81 7.4e-05 0.007095
GO:0009059 macromolecule biosynthetic process 6.41% (5/78) 2.99 0.000423 0.007382
GO:0003674 molecular_function 38.46% (30/78) 0.87 0.000347 0.007404
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.85% (3/78) 4.47 0.000341 0.00819
GO:0004812 aminoacyl-tRNA ligase activity 3.85% (3/78) 4.47 0.000341 0.00819
GO:1901564 organonitrogen compound metabolic process 14.1% (11/78) 1.92 0.000147 0.009438
GO:0043038 amino acid activation 3.85% (3/78) 4.5 0.000318 0.010182
GO:0043039 tRNA aminoacylation 3.85% (3/78) 4.5 0.000318 0.010182
GO:0006807 nitrogen compound metabolic process 16.67% (13/78) 1.48 0.000681 0.010893
GO:0006418 tRNA aminoacylation for protein translation 3.85% (3/78) 4.61 0.000255 0.012241
GO:0008152 metabolic process 23.08% (18/78) 1.46 6.5e-05 0.012424
GO:0016070 RNA metabolic process 6.41% (5/78) 2.76 0.00088 0.01299
GO:0140101 catalytic activity, acting on a tRNA 3.85% (3/78) 3.89 0.001099 0.015066
GO:0006352 DNA-templated transcription, initiation 2.56% (2/78) 5.14 0.001457 0.018655
GO:0030170 pyridoxal phosphate binding 2.56% (2/78) 4.4 0.004043 0.019905
GO:0070279 vitamin B6 binding 2.56% (2/78) 4.4 0.004043 0.019905
GO:0006399 tRNA metabolic process 3.85% (3/78) 3.68 0.001671 0.020053
GO:0044238 primary metabolic process 15.38% (12/78) 1.24 0.004327 0.020262
GO:0003824 catalytic activity 20.51% (16/78) 1.03 0.004231 0.020307
GO:0016874 ligase activity 3.85% (3/78) 3.32 0.003403 0.020417
GO:0043604 amide biosynthetic process 3.85% (3/78) 3.32 0.003403 0.020417
GO:0034660 ncRNA metabolic process 3.85% (3/78) 3.32 0.003403 0.020417
GO:0003735 structural constituent of ribosome 3.85% (3/78) 3.53 0.002242 0.020498
GO:0006412 translation 3.85% (3/78) 3.55 0.002165 0.020783
GO:0043603 cellular amide metabolic process 3.85% (3/78) 3.23 0.004042 0.020975
GO:0043232 intracellular non-membrane-bounded organelle 3.85% (3/78) 3.23 0.004042 0.020975
GO:0043228 non-membrane-bounded organelle 3.85% (3/78) 3.23 0.004042 0.020975
GO:0006518 peptide metabolic process 3.85% (3/78) 3.35 0.003205 0.021217
GO:0006520 cellular amino acid metabolic process 3.85% (3/78) 3.35 0.003205 0.021217
GO:0071704 organic substance metabolic process 16.67% (13/78) 1.3 0.002111 0.021332
GO:0005840 ribosome 3.85% (3/78) 3.59 0.002016 0.0215
GO:0008150 biological_process 25.64% (20/78) 0.98 0.00192 0.02168
GO:0034641 cellular nitrogen compound metabolic process 10.26% (8/78) 1.66 0.003804 0.022131
GO:1990904 ribonucleoprotein complex 3.85% (3/78) 3.25 0.003931 0.022198
GO:0006426 glycyl-tRNA aminoacylation 1.28% (1/78) 8.31 0.003158 0.022454
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity 1.28% (1/78) 8.31 0.003158 0.022454
GO:0004820 glycine-tRNA ligase activity 1.28% (1/78) 8.31 0.003158 0.022454
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 1.28% (1/78) 8.31 0.003158 0.022454
GO:0043043 peptide biosynthetic process 3.85% (3/78) 3.42 0.00283 0.024698
GO:0050662 coenzyme binding 3.85% (3/78) 3.0 0.006378 0.024991
GO:0005198 structural molecule activity 3.85% (3/78) 3.38 0.003014 0.025158
GO:0016787 hydrolase activity 10.26% (8/78) 1.53 0.006326 0.025305
GO:0019842 vitamin binding 2.56% (2/78) 4.02 0.006762 0.025458
GO:0061783 peptidoglycan muralytic activity 1.28% (1/78) 7.31 0.006305 0.025758
GO:0009253 peptidoglycan catabolic process 1.28% (1/78) 7.31 0.006305 0.025758
GO:0006027 glycosaminoglycan catabolic process 1.28% (1/78) 7.31 0.006305 0.025758
GO:0006026 aminoglycan catabolic process 1.28% (1/78) 7.31 0.006305 0.025758
GO:0019538 protein metabolic process 8.97% (7/78) 1.66 0.006712 0.025772
GO:0006508 proteolysis 5.13% (4/78) 2.49 0.005649 0.025825
GO:0044271 cellular nitrogen compound biosynthetic process 6.41% (5/78) 2.13 0.005861 0.026169
GO:0019752 carboxylic acid metabolic process 3.85% (3/78) 2.87 0.00813 0.030017
GO:0022610 biological adhesion 1.28% (1/78) 6.72 0.009443 0.030219
GO:0000270 peptidoglycan metabolic process 1.28% (1/78) 6.72 0.009443 0.030219
GO:0030203 glycosaminoglycan metabolic process 1.28% (1/78) 6.72 0.009443 0.030219
GO:0007155 cell adhesion 1.28% (1/78) 6.72 0.009443 0.030219
GO:0006022 aminoglycan metabolic process 1.28% (1/78) 6.72 0.009443 0.030219
GO:0043436 oxoacid metabolic process 3.85% (3/78) 2.84 0.008652 0.031342
GO:0140098 catalytic activity, acting on RNA 3.85% (3/78) 2.83 0.00883 0.031396
GO:0006082 organic acid metabolic process 3.85% (3/78) 2.82 0.009011 0.031455
GO:0005737 cytoplasm 2.56% (2/78) 3.72 0.010107 0.031813
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.28% (1/78) 6.31 0.012572 0.037135
GO:1901136 carbohydrate derivative catabolic process 1.28% (1/78) 6.31 0.012572 0.037135
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 1.28% (1/78) 6.31 0.012572 0.037135
GO:0004427 inorganic diphosphatase activity 1.28% (1/78) 6.31 0.012572 0.037135
GO:0000049 tRNA binding 1.28% (1/78) 5.99 0.01569 0.043659
GO:0008483 transaminase activity 1.28% (1/78) 5.99 0.01569 0.043659
GO:0016769 transferase activity, transferring nitrogenous groups 1.28% (1/78) 5.99 0.01569 0.043659
GO:0090304 nucleic acid metabolic process 6.41% (5/78) 1.78 0.015363 0.044692
GO:0034645 cellular macromolecule biosynthetic process 3.85% (3/78) 2.47 0.016976 0.046562
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_183 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_1 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_86 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_111 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_135 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_150 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_314 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_294 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_31 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.024 Archaeplastida Compare
Sequences (78) (download table)

InterPro Domains

GO Terms

Family Terms