Coexpression cluster: Cluster_331 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030488 tRNA methylation 3.85% (2/52) 9.05 5e-06 9.7e-05
GO:0031515 tRNA (m1A) methyltransferase complex 3.85% (2/52) 9.05 5e-06 9.7e-05
GO:0043527 tRNA methyltransferase complex 3.85% (2/52) 9.05 5e-06 9.7e-05
GO:0034708 methyltransferase complex 3.85% (2/52) 9.05 5e-06 9.7e-05
GO:0016426 tRNA (adenine) methyltransferase activity 3.85% (2/52) 9.63 2e-06 9.7e-05
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 3.85% (2/52) 9.63 2e-06 9.7e-05
GO:0001510 RNA methylation 3.85% (2/52) 8.05 2.3e-05 0.000415
GO:0008175 tRNA methyltransferase activity 3.85% (2/52) 7.83 3.3e-05 0.000508
GO:0006400 tRNA modification 3.85% (2/52) 6.93 0.00012 0.001669
GO:0008173 RNA methyltransferase activity 3.85% (2/52) 6.55 0.000209 0.00261
GO:0043414 macromolecule methylation 3.85% (2/52) 5.99 0.000458 0.004767
GO:0008033 tRNA processing 3.85% (2/52) 6.05 0.000421 0.004789
GO:0009451 RNA modification 3.85% (2/52) 5.73 0.000661 0.005901
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.85% (2/52) 5.78 0.000617 0.005937
GO:0032259 methylation 3.85% (2/52) 5.59 0.0008 0.006669
GO:1990234 transferase complex 3.85% (2/52) 5.46 0.000953 0.007443
GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity 1.92% (1/52) 9.63 0.001259 0.009256
GO:0034470 ncRNA processing 3.85% (2/52) 5.14 0.001486 0.010321
GO:0140101 catalytic activity, acting on a tRNA 3.85% (2/52) 4.66 0.00289 0.019012
GO:0006399 tRNA metabolic process 3.85% (2/52) 4.61 0.003073 0.019205
GO:0140098 catalytic activity, acting on RNA 5.77% (3/52) 3.15 0.004769 0.027097
GO:0003723 RNA binding 5.77% (3/52) 3.16 0.004623 0.027517
GO:0034660 ncRNA metabolic process 3.85% (2/52) 4.21 0.005309 0.028855
GO:1902494 catalytic complex 3.85% (2/52) 4.14 0.005799 0.030203
GO:0003676 nucleic acid binding 11.54% (6/52) 1.82 0.006733 0.033664
GO:0032991 protein-containing complex 7.69% (4/52) 2.36 0.007573 0.036411
GO:0030127 COPII vesicle coat 1.92% (1/52) 6.83 0.008779 0.040644
GO:0006396 RNA processing 3.85% (2/52) 3.7 0.010417 0.046505
GO:0006888 ER to Golgi vesicle-mediated transport 1.92% (1/52) 6.46 0.011274 0.046973
GO:0044444 cytoplasmic part 5.77% (3/52) 2.7 0.011064 0.04769
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.041 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_100 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_101 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_277 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_30 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_158 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_171 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_353 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_253 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_64 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_114 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_277 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_415 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_527 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_359 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_163 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.031 Archaeplastida Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms