Coexpression cluster: Cluster_166 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006260 DNA replication 7.63% (9/118) 3.02 2e-06 0.000417
GO:0005730 nucleolus 8.47% (10/118) 3.02 0.0 0.000424
GO:0043228 non-membrane-bounded organelle 11.86% (14/118) 2.25 1e-06 0.000454
GO:0043232 intracellular non-membrane-bounded organelle 11.86% (14/118) 2.25 1e-06 0.000454
GO:0006261 DNA-dependent DNA replication 6.78% (8/118) 3.19 3e-06 0.000528
GO:0006139 nucleobase-containing compound metabolic process 23.73% (28/118) 1.32 4e-06 0.000668
GO:0044428 nuclear part 10.17% (12/118) 2.29 7e-06 0.000905
GO:0006325 chromatin organization 9.32% (11/118) 2.29 1.7e-05 0.001705
GO:0046483 heterocycle metabolic process 24.58% (29/118) 1.17 2.1e-05 0.001779
GO:0034641 cellular nitrogen compound metabolic process 25.42% (30/118) 1.13 2.4e-05 0.001797
GO:0018205 peptidyl-lysine modification 7.63% (9/118) 2.63 1.6e-05 0.001857
GO:0016570 histone modification 7.63% (9/118) 2.59 2e-05 0.001866
GO:0032259 methylation 8.47% (10/118) 2.19 7.2e-05 0.003453
GO:0043414 macromolecule methylation 8.47% (10/118) 2.19 7.2e-05 0.003453
GO:0018022 peptidyl-lysine methylation 5.93% (7/118) 2.82 6.4e-05 0.003641
GO:0008283 cell proliferation 5.08% (6/118) 3.13 6.8e-05 0.003658
GO:0018193 peptidyl-amino acid modification 7.63% (9/118) 2.4 5.8e-05 0.00375
GO:0034968 histone lysine methylation 5.93% (7/118) 2.83 6.2e-05 0.00378
GO:0016569 covalent chromatin modification 7.63% (9/118) 2.4 5.5e-05 0.003886
GO:0006725 cellular aromatic compound metabolic process 24.58% (29/118) 1.03 0.000123 0.005595
GO:1901265 nucleoside phosphate binding 10.17% (12/118) 1.74 0.000267 0.008113
GO:0000166 nucleotide binding 10.17% (12/118) 1.74 0.000267 0.008113
GO:1901360 organic cyclic compound metabolic process 24.58% (29/118) 0.96 0.000278 0.008181
GO:0090304 nucleic acid metabolic process 16.95% (20/118) 1.23 0.000302 0.008349
GO:0006807 nitrogen compound metabolic process 33.05% (39/118) 0.77 0.000297 0.008455
GO:0051726 regulation of cell cycle 5.93% (7/118) 2.49 0.000264 0.008603
GO:0043226 organelle 76.27% (90/118) 0.33 0.000264 0.0089
GO:0043229 intracellular organelle 76.27% (90/118) 0.33 0.000259 0.009082
GO:0097159 organic cyclic compound binding 22.03% (26/118) 1.05 0.000251 0.009131
GO:0006479 protein methylation 5.93% (7/118) 2.51 0.000243 0.009232
GO:0008213 protein alkylation 5.93% (7/118) 2.51 0.000243 0.009232
GO:0016571 histone methylation 5.93% (7/118) 2.53 0.000228 0.00945
GO:0034645 cellular macromolecule biosynthetic process 12.71% (15/118) 1.46 0.000365 0.009775
GO:1901363 heterocyclic compound binding 22.03% (26/118) 1.06 0.000226 0.009813
GO:0043603 cellular amide metabolic process 7.63% (9/118) 2.03 0.000384 0.009992
GO:1903047 mitotic cell cycle process 5.08% (6/118) 2.65 0.000409 0.010356
GO:0044424 intracellular part 83.9% (99/118) 0.26 0.000463 0.011388
GO:0022402 cell cycle process 7.63% (9/118) 1.95 0.000561 0.013449
GO:0006268 DNA unwinding involved in DNA replication 1.69% (2/118) 5.7 0.000637 0.014514
GO:0043231 intracellular membrane-bounded organelle 74.58% (88/118) 0.31 0.000625 0.014599
GO:0043227 membrane-bounded organelle 74.58% (88/118) 0.31 0.000673 0.014949
GO:0044464 cell part 88.98% (105/118) 0.21 0.000791 0.01715
GO:0036094 small molecule binding 11.02% (13/118) 1.46 0.000922 0.019543
GO:0072655 establishment of protein localization to mitochondrion 3.39% (4/118) 3.16 0.00108 0.019684
GO:0070585 protein localization to mitochondrion 3.39% (4/118) 3.16 0.00108 0.019684
GO:0005634 nucleus 47.46% (56/118) 0.5 0.001166 0.020034
GO:0044728 DNA methylation or demethylation 4.24% (5/118) 2.69 0.001122 0.02004
GO:0006304 DNA modification 4.24% (5/118) 2.68 0.00115 0.020139
GO:0006305 DNA alkylation 4.24% (5/118) 2.7 0.001068 0.020271
GO:0006306 DNA methylation 4.24% (5/118) 2.7 0.001068 0.020271
GO:0051567 histone H3-K9 methylation 4.24% (5/118) 2.71 0.001042 0.020635
GO:0061647 histone H3-K9 modification 4.24% (5/118) 2.71 0.001042 0.020635
GO:0006626 protein targeting to mitochondrion 3.39% (4/118) 3.19 0.001006 0.020824
GO:0044446 intracellular organelle part 21.19% (25/118) 0.92 0.001256 0.021181
GO:0032508 DNA duplex unwinding 1.69% (2/118) 5.17 0.001365 0.021447
GO:0044422 organelle part 21.19% (25/118) 0.91 0.001296 0.021469
GO:0022613 ribonucleoprotein complex biogenesis 3.39% (4/118) 3.08 0.001327 0.021592
GO:0009059 macromolecule biosynthetic process 12.71% (15/118) 1.27 0.001358 0.021698
GO:0032392 DNA geometric change 1.69% (2/118) 5.07 0.001589 0.024529
GO:0071840 cellular component organization or biogenesis 20.34% (24/118) 0.91 0.001728 0.026233
GO:0044430 cytoskeletal part 3.39% (4/118) 2.84 0.002433 0.036332
GO:0006275 regulation of DNA replication 3.39% (4/118) 2.81 0.00264 0.036444
GO:0006220 pyrimidine nucleotide metabolic process 3.39% (4/118) 2.81 0.00264 0.036444
GO:0006221 pyrimidine nucleotide biosynthetic process 3.39% (4/118) 2.81 0.00264 0.036444
GO:0006270 DNA replication initiation 2.54% (3/118) 3.44 0.002728 0.037096
GO:0009220 pyrimidine ribonucleotide biosynthetic process 3.39% (4/118) 2.82 0.00257 0.03716
GO:0009218 pyrimidine ribonucleotide metabolic process 3.39% (4/118) 2.82 0.00257 0.03716
GO:0000724 double-strand break repair via homologous recombination 2.54% (3/118) 3.41 0.002849 0.03762
GO:0000725 recombinational repair 2.54% (3/118) 3.41 0.002849 0.03762
GO:0009560 embryo sac egg cell differentiation 3.39% (4/118) 2.76 0.002935 0.037664
GO:0044267 cellular protein metabolic process 15.25% (18/118) 1.03 0.002912 0.037903
GO:0009259 ribonucleotide metabolic process 5.93% (7/118) 1.88 0.003116 0.039426
GO:0072528 pyrimidine-containing compound biosynthetic process 3.39% (4/118) 2.72 0.003252 0.040588
GO:0043170 macromolecule metabolic process 27.12% (32/118) 0.67 0.003941 0.047245
GO:0005488 binding 32.2% (38/118) 0.59 0.003902 0.0474
GO:0010485 H4 histone acetyltransferase activity 0.85% (1/118) 7.87 0.004267 0.047404
GO:0042273 ribosomal large subunit biogenesis 0.85% (1/118) 7.87 0.004267 0.047404
GO:0004070 aspartate carbamoyltransferase activity 0.85% (1/118) 7.87 0.004267 0.047404
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine 0.85% (1/118) 7.87 0.004267 0.047404
GO:0000107 imidazoleglycerol-phosphate synthase activity 0.85% (1/118) 7.87 0.004267 0.047404
GO:0033984 indole-3-glycerol-phosphate lyase activity 0.85% (1/118) 7.87 0.004267 0.047404
GO:0006839 mitochondrial transport 3.39% (4/118) 2.65 0.003862 0.047542
GO:0009909 regulation of flower development 5.08% (6/118) 1.97 0.004478 0.047995
GO:0072527 pyrimidine-containing compound metabolic process 3.39% (4/118) 2.6 0.004442 0.048177
GO:1901564 organonitrogen compound metabolic process 24.58% (29/118) 0.71 0.004431 0.048638
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_5 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_23 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_44 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_72 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_80 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_112 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_184 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_190 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_211 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_223 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_228 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_264 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_12 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_27 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_55 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_56 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_78 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_96 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_154 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_184 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_188 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_189 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_206 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_215 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_229 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_269 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_7 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_13 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.043 Archaeplastida Compare
Gingko biloba HCCA Cluster_66 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_205 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_263 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_309 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_8 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_29 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_69 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_81 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_195 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_234 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_241 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_280 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_283 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_294 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_346 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_360 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_107 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_148 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_163 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_117 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_184 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_72 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_160 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_192 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_313 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_364 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_454 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_489 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_540 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_11 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_20 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_45 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_48 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.046 Archaeplastida Compare
Oryza sativa HCCA Cluster_105 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_142 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_160 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_161 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_194 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_335 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_350 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_28 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_36 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_67 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_133 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_139 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_160 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_185 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_21 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_28 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_38 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_40 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_53 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.044 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_153 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_248 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_250 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_2 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_41 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.049 Archaeplastida Compare
Vitis vinifera HCCA Cluster_50 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_64 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_152 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.049 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_209 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_228 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.029 Archaeplastida Compare
Sequences (118) (download table)

InterPro Domains

GO Terms

Family Terms