Coexpression cluster: Cluster_92 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.19% (4/77) 4.68 1.9e-05 0.000377
GO:0097747 RNA polymerase activity 5.19% (4/77) 4.68 1.9e-05 0.000377
GO:0034062 5'-3' RNA polymerase activity 5.19% (4/77) 4.68 1.9e-05 0.000377
GO:0016779 nucleotidyltransferase activity 5.19% (4/77) 4.42 3.8e-05 0.000439
GO:0006351 transcription, DNA-templated 5.19% (4/77) 4.47 3.3e-05 0.00044
GO:0097659 nucleic acid-templated transcription 5.19% (4/77) 4.47 3.3e-05 0.00044
GO:0032774 RNA biosynthetic process 5.19% (4/77) 4.34 4.7e-05 0.000467
GO:0003677 DNA binding 7.79% (6/77) 3.72 7e-06 0.00053
GO:0090304 nucleic acid metabolic process 6.49% (5/77) 3.53 7.5e-05 0.000665
GO:0140098 catalytic activity, acting on RNA 5.19% (4/77) 4.08 9.7e-05 0.000773
GO:0034654 nucleobase-containing compound biosynthetic process 5.19% (4/77) 3.85 0.000177 0.001288
GO:1901360 organic cyclic compound metabolic process 6.49% (5/77) 3.1 0.000299 0.001327
GO:1901362 organic cyclic compound biosynthetic process 5.19% (4/77) 3.65 0.000298 0.0014
GO:0006725 cellular aromatic compound metabolic process 6.49% (5/77) 3.12 0.000282 0.001411
GO:0006139 nucleobase-containing compound metabolic process 6.49% (5/77) 3.21 0.000214 0.001429
GO:0046483 heterocycle metabolic process 6.49% (5/77) 3.13 0.000277 0.001476
GO:0016070 RNA metabolic process 5.19% (4/77) 3.59 0.000351 0.00148
GO:0018130 heterocycle biosynthetic process 5.19% (4/77) 3.7 0.000265 0.001515
GO:0019438 aromatic compound biosynthetic process 5.19% (4/77) 3.72 0.00025 0.001538
GO:0003676 nucleic acid binding 7.79% (6/77) 2.65 0.000403 0.001614
GO:0016772 transferase activity, transferring phosphorus-containing groups 6.49% (5/77) 2.89 0.000594 0.002264
GO:0016740 transferase activity 6.49% (5/77) 2.35 0.003007 0.010933
GO:0044260 cellular macromolecule metabolic process 7.79% (6/77) 1.99 0.004012 0.013374
GO:1901576 organic substance biosynthetic process 6.49% (5/77) 2.24 0.004208 0.013467
GO:0044249 cellular biosynthetic process 6.49% (5/77) 2.26 0.003975 0.013826
GO:0009058 biosynthetic process 6.49% (5/77) 2.2 0.004791 0.014742
GO:0034641 cellular nitrogen compound metabolic process 6.49% (5/77) 2.1 0.006336 0.017477
GO:0044238 primary metabolic process 9.09% (7/77) 1.68 0.006158 0.017595
GO:0044237 cellular metabolic process 9.09% (7/77) 1.69 0.006087 0.018037
GO:0071704 organic substance metabolic process 9.09% (7/77) 1.63 0.007499 0.019997
GO:0034645 cellular macromolecule biosynthetic process 5.19% (4/77) 2.33 0.008355 0.020887
GO:0043170 macromolecule metabolic process 7.79% (6/77) 1.78 0.008249 0.021287
GO:0009059 macromolecule biosynthetic process 5.19% (4/77) 2.3 0.008967 0.021738
GO:0005992 trehalose biosynthetic process 1.3% (1/77) 6.72 0.009456 0.022249
GO:0009987 cellular process 9.09% (7/77) 1.49 0.012404 0.026819
GO:0005991 trehalose metabolic process 1.3% (1/77) 6.4 0.011806 0.026985
GO:0044271 cellular nitrogen compound biosynthetic process 5.19% (4/77) 2.17 0.012248 0.027217
GO:0006807 nitrogen compound metabolic process 7.79% (6/77) 1.62 0.013576 0.028582
GO:0046351 disaccharide biosynthetic process 1.3% (1/77) 6.13 0.014151 0.029027
GO:0005507 copper ion binding 1.3% (1/77) 5.72 0.018824 0.034225
GO:0009312 oligosaccharide biosynthetic process 1.3% (1/77) 5.72 0.018824 0.034225
GO:0005984 disaccharide metabolic process 1.3% (1/77) 5.72 0.018824 0.034225
GO:0097159 organic cyclic compound binding 7.79% (6/77) 1.53 0.018006 0.035134
GO:1901363 heterocyclic compound binding 7.79% (6/77) 1.53 0.018006 0.035134
GO:0034637 cellular carbohydrate biosynthetic process 1.3% (1/77) 5.4 0.023474 0.040825
GO:0009311 oligosaccharide metabolic process 1.3% (1/77) 5.4 0.023474 0.040825
GO:0008152 metabolic process 9.09% (7/77) 1.25 0.02749 0.046791
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Physcomitrella patens HCCA Cluster_13 0.069 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_18 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_24 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.085 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_31 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_35 0.082 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_37 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_40 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_52 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_54 0.065 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_57 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_58 0.078 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_62 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_65 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_66 0.083 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_69 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_76 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_77 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_79 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_80 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_85 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_86 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_89 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_93 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_96 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_100 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_101 0.061 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_116 0.074 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_122 0.082 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_123 0.078 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_138 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_140 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_153 0.052 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_159 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_164 0.066 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_168 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_172 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_178 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_179 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_180 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_181 0.071 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_188 0.058 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_190 0.07 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_195 0.052 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_197 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_254 0.06 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_305 0.066 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_317 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_84 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.021 Archaeplastida Compare
Sequences (77) (download table)

InterPro Domains

GO Terms

Family Terms