Coexpression cluster: Cluster_147 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009892 negative regulation of metabolic process 11.59% (8/69) 2.29 0.00022 0.013957
GO:0031047 gene silencing by RNA 7.25% (5/69) 3.15 0.000256 0.014761
GO:0045814 negative regulation of gene expression, epigenetic 7.25% (5/69) 3.07 0.000331 0.014999
GO:0006342 chromatin silencing 7.25% (5/69) 3.09 0.000313 0.015243
GO:0004525 ribonuclease III activity 2.9% (2/69) 6.48 0.000218 0.015384
GO:0032296 double-stranded RNA-specific ribonuclease activity 2.9% (2/69) 6.48 0.000218 0.015384
GO:0003723 RNA binding 10.14% (7/69) 2.45 0.000293 0.015503
GO:0031048 chromatin silencing by small RNA 5.8% (4/69) 3.8 0.000199 0.018037
GO:0006401 RNA catabolic process 5.8% (4/69) 3.84 0.00018 0.019011
GO:0010605 negative regulation of macromolecule metabolic process 11.59% (8/69) 2.36 0.000162 0.02052
GO:0006402 mRNA catabolic process 5.8% (4/69) 3.96 0.00013 0.020645
GO:0005634 nucleus 56.52% (39/69) 0.75 7.3e-05 0.022998
GO:0000956 nuclear-transcribed mRNA catabolic process 5.8% (4/69) 3.97 0.000125 0.026507
GO:0048519 negative regulation of biological process 14.49% (10/69) 1.76 0.000689 0.027317
GO:0040029 regulation of gene expression, epigenetic 7.25% (5/69) 2.85 0.000658 0.027825
GO:0003725 double-stranded RNA binding 2.9% (2/69) 5.48 0.000915 0.034115
GO:0016458 gene silencing 7.25% (5/69) 2.72 0.000982 0.034604
GO:0010629 negative regulation of gene expression 11.59% (8/69) 2.54 6.9e-05 0.043595
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_24 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_54 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_55 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_74 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_117 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_185 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_14 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_185 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_189 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_277 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_158 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_170 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_171 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_205 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_225 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.053 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_310 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_77 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_200 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_280 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_484 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_314 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_322 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_340 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_345 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_31 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_177 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_221 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_256 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_142 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_163 0.026 Archaeplastida Compare
Sequences (69) (download table)

InterPro Domains

GO Terms

Family Terms