Coexpression cluster: Cluster_405 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044425 membrane part 24.62% (16/65) 4.01 0.0 0.0
GO:0051179 localization 21.54% (14/65) 3.27 0.0 0.0
GO:0051234 establishment of localization 21.54% (14/65) 3.28 0.0 0.0
GO:0006810 transport 21.54% (14/65) 3.28 0.0 0.0
GO:0005575 cellular_component 29.23% (19/65) 2.63 0.0 0.0
GO:0098796 membrane protein complex 10.77% (7/65) 5.27 0.0 0.0
GO:0016021 integral component of membrane 15.38% (10/65) 3.64 0.0 0.0
GO:0031224 intrinsic component of membrane 15.38% (10/65) 3.61 0.0 0.0
GO:0072511 divalent inorganic cation transport 4.62% (3/65) 8.13 0.0 3e-06
GO:0015693 magnesium ion transport 4.62% (3/65) 8.13 0.0 3e-06
GO:0015095 magnesium ion transmembrane transporter activity 4.62% (3/65) 8.13 0.0 3e-06
GO:0070838 divalent metal ion transport 4.62% (3/65) 8.13 0.0 3e-06
GO:0016192 vesicle-mediated transport 7.69% (5/65) 5.11 0.0 8e-06
GO:0044444 cytoplasmic part 10.77% (7/65) 3.71 1e-06 2.2e-05
GO:0044433 cytoplasmic vesicle part 4.62% (3/65) 6.78 3e-06 5.1e-05
GO:0032991 protein-containing complex 12.31% (8/65) 3.17 3e-06 5.2e-05
GO:0044464 cell part 13.85% (9/65) 2.81 5e-06 8.6e-05
GO:0006812 cation transport 7.69% (5/65) 3.92 2.1e-05 0.000319
GO:0044424 intracellular part 12.31% (8/65) 2.76 2.4e-05 0.000336
GO:0022890 inorganic cation transmembrane transporter activity 6.15% (4/65) 4.45 3.6e-05 0.00049
GO:0071705 nitrogen compound transport 6.15% (4/65) 4.3 5.4e-05 0.000692
GO:0044446 intracellular organelle part 7.69% (5/65) 3.58 6.6e-05 0.000739
GO:0044422 organelle part 7.69% (5/65) 3.58 6.6e-05 0.000739
GO:0008324 cation transmembrane transporter activity 6.15% (4/65) 4.25 6.2e-05 0.000764
GO:0071702 organic substance transport 6.15% (4/65) 4.14 8.3e-05 0.000901
GO:0006811 ion transport 7.69% (5/65) 3.46 9.6e-05 0.000995
GO:0046873 metal ion transmembrane transporter activity 4.62% (3/65) 4.91 0.000142 0.00142
GO:0015318 inorganic molecular entity transmembrane transporter activity 6.15% (4/65) 3.87 0.000171 0.001651
GO:0030120 vesicle coat 3.08% (2/65) 6.48 0.000234 0.002105
GO:0006886 intracellular protein transport 4.62% (3/65) 4.68 0.000229 0.002135
GO:0015075 ion transmembrane transporter activity 6.15% (4/65) 3.71 0.000261 0.002275
GO:0022857 transmembrane transporter activity 9.23% (6/65) 2.73 0.000292 0.00246
GO:0005215 transporter activity 9.23% (6/65) 2.71 0.000314 0.002569
GO:0051649 establishment of localization in cell 4.62% (3/65) 4.46 0.00036 0.002781
GO:0046907 intracellular transport 4.62% (3/65) 4.46 0.00036 0.002781
GO:0044431 Golgi apparatus part 3.08% (2/65) 6.09 0.0004 0.003003
GO:0033036 macromolecule localization 4.62% (3/65) 4.21 0.000592 0.003718
GO:0008104 protein localization 4.62% (3/65) 4.21 0.000592 0.003718
GO:0015833 peptide transport 4.62% (3/65) 4.25 0.000552 0.003723
GO:0015031 protein transport 4.62% (3/65) 4.25 0.000552 0.003723
GO:0042886 amide transport 4.62% (3/65) 4.25 0.000552 0.003723
GO:0045184 establishment of protein localization 4.62% (3/65) 4.22 0.000582 0.003832
GO:0051641 cellular localization 4.62% (3/65) 4.26 0.000532 0.003883
GO:0030117 membrane coat 3.08% (2/65) 5.61 0.000787 0.004827
GO:0016972 thiol oxidase activity 1.54% (1/65) 10.0 0.000976 0.005853
GO:0030001 metal ion transport 4.62% (3/65) 3.87 0.001183 0.006945
GO:0008150 biological_process 30.77% (20/65) 0.99 0.001433 0.008229
GO:0042546 cell wall biogenesis 1.54% (1/65) 9.0 0.00195 0.009573
GO:0031127 alpha-(1,2)-fucosyltransferase activity 1.54% (1/65) 9.0 0.00195 0.009573
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity 1.54% (1/65) 9.0 0.00195 0.009573
GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity 1.54% (1/65) 9.0 0.00195 0.009573
GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor 1.54% (1/65) 9.0 0.00195 0.009573
GO:0030131 clathrin adaptor complex 1.54% (1/65) 9.0 0.00195 0.009573
GO:0000814 ESCRT II complex 1.54% (1/65) 9.0 0.00195 0.009573
GO:0019107 myristoyltransferase activity 1.54% (1/65) 9.0 0.00195 0.009573
GO:1902600 proton transmembrane transport 3.08% (2/65) 4.91 0.002048 0.009699
GO:0055085 transmembrane transport 7.69% (5/65) 2.48 0.002031 0.009792
GO:0030119 AP-type membrane coat adaptor complex 1.54% (1/65) 8.42 0.002924 0.013157
GO:0071985 multivesicular body sorting pathway 1.54% (1/65) 8.42 0.002924 0.013157
GO:0036452 ESCRT complex 1.54% (1/65) 8.42 0.002924 0.013157
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity 1.54% (1/65) 8.0 0.003896 0.016185
GO:0015780 nucleotide-sugar transmembrane transport 1.54% (1/65) 8.0 0.003896 0.016185
GO:0090481 pyrimidine nucleotide-sugar transmembrane transport 1.54% (1/65) 8.0 0.003896 0.016185
GO:0005338 nucleotide-sugar transmembrane transporter activity 1.54% (1/65) 8.0 0.003896 0.016185
GO:0008417 fucosyltransferase activity 1.54% (1/65) 8.0 0.003896 0.016185
GO:0044440 endosomal part 1.54% (1/65) 7.68 0.004868 0.019618
GO:0000139 Golgi membrane 1.54% (1/65) 7.68 0.004868 0.019618
GO:0015672 monovalent inorganic cation transport 3.08% (2/65) 4.23 0.005157 0.020474
GO:0098655 cation transmembrane transport 3.08% (2/65) 4.19 0.005435 0.02067
GO:0098660 inorganic ion transmembrane transport 3.08% (2/65) 4.19 0.005435 0.02067
GO:0098662 inorganic cation transmembrane transport 3.08% (2/65) 4.19 0.005435 0.02067
GO:0030126 COPI vesicle coat 1.54% (1/65) 7.42 0.005839 0.021896
GO:0034220 ion transmembrane transport 3.08% (2/65) 4.12 0.006014 0.022242
GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity 3.08% (2/65) 4.08 0.006313 0.022726
GO:0015399 primary active transmembrane transporter activity 3.08% (2/65) 4.08 0.006313 0.022726
GO:1902494 catalytic complex 3.08% (2/65) 4.02 0.006826 0.024251
GO:0008373 sialyltransferase activity 1.54% (1/65) 6.83 0.008746 0.030274
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.54% (1/65) 6.83 0.008746 0.030274
GO:1901264 carbohydrate derivative transport 1.54% (1/65) 6.68 0.009713 0.033196
GO:0005787 signal peptidase complex 1.54% (1/65) 6.42 0.011644 0.038815
GO:0006465 signal peptide processing 1.54% (1/65) 6.42 0.011644 0.038815
GO:0009678 hydrogen-translocating pyrophosphatase activity 1.54% (1/65) 6.19 0.013572 0.04261
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.54% (1/65) 6.19 0.013572 0.04261
GO:1905368 peptidase complex 1.54% (1/65) 6.19 0.013572 0.04261
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.54% (1/65) 6.19 0.013572 0.04261
GO:0044085 cellular component biogenesis 1.54% (1/65) 6.19 0.013572 0.04261
GO:0030127 COPII vesicle coat 1.54% (1/65) 6.09 0.014535 0.045108
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 1.54% (1/65) 5.91 0.016457 0.047269
GO:0022853 active ion transmembrane transporter activity 1.54% (1/65) 5.91 0.016457 0.047269
GO:0042625 ATPase coupled ion transmembrane transporter activity 1.54% (1/65) 5.91 0.016457 0.047269
GO:0006888 ER to Golgi vesicle-mediated transport 1.54% (1/65) 5.91 0.016457 0.047269
GO:0019829 cation-transporting ATPase activity 1.54% (1/65) 5.91 0.016457 0.047269
GO:0016485 protein processing 1.54% (1/65) 5.91 0.016457 0.047269
GO:0004427 inorganic diphosphatase activity 1.54% (1/65) 6.0 0.015496 0.047545
GO:0016020 membrane 6.15% (4/65) 2.02 0.017186 0.048846
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_51 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_99 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_176 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_204 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_217 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_73 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_150 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_232 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_258 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_269 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_155 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_213 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_193 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_279 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_281 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_285 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_288 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_307 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_355 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_357 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_361 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_72 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_158 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_273 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_284 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_409 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_483 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_75 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_209 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_307 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_352 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_139 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_195 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_200 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_249 0.025 Archaeplastida Compare
Sequences (65) (download table)

InterPro Domains

GO Terms

Family Terms