Coexpression cluster: Cluster_40 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090304 nucleic acid metabolic process 9.09% (6/66) 3.53 1.4e-05 0.002318
GO:0016070 RNA metabolic process 7.58% (5/66) 3.79 3.3e-05 0.002675
GO:0006399 tRNA metabolic process 4.55% (3/66) 4.99 0.00012 0.00325
GO:0046483 heterocycle metabolic process 9.09% (6/66) 2.93 0.000141 0.003262
GO:0006725 cellular aromatic compound metabolic process 9.09% (6/66) 2.88 0.00017 0.00344
GO:0140101 catalytic activity, acting on a tRNA 4.55% (3/66) 5.16 8.6e-05 0.003503
GO:0034641 cellular nitrogen compound metabolic process 10.61% (7/66) 2.69 0.000108 0.003507
GO:0034660 ncRNA metabolic process 4.55% (3/66) 4.66 0.00024 0.003887
GO:0006139 nucleobase-containing compound metabolic process 9.09% (6/66) 3.1 7.3e-05 0.003962
GO:1901360 organic cyclic compound metabolic process 9.09% (6/66) 2.8 0.000223 0.004018
GO:0006396 RNA processing 4.55% (3/66) 4.45 0.000369 0.005437
GO:0006397 mRNA processing 3.03% (2/66) 5.55 0.00085 0.011474
GO:0016071 mRNA metabolic process 3.03% (2/66) 5.34 0.001148 0.014305
GO:0006418 tRNA aminoacylation for protein translation 3.03% (2/66) 5.22 0.001338 0.015477
GO:0004812 aminoacyl-tRNA ligase activity 3.03% (2/66) 5.03 0.001758 0.015826
GO:0043038 amino acid activation 3.03% (2/66) 5.03 0.001758 0.015826
GO:0043039 tRNA aminoacylation 3.03% (2/66) 5.03 0.001758 0.015826
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.03% (2/66) 5.03 0.001758 0.015826
GO:0140098 catalytic activity, acting on RNA 4.55% (3/66) 3.58 0.002098 0.017889
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 1.52% (1/66) 8.39 0.002969 0.024046
GO:0070008 serine-type exopeptidase activity 3.03% (2/66) 4.39 0.00415 0.03201
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity 1.52% (1/66) 7.39 0.005929 0.03694
GO:0016423 tRNA (guanine) methyltransferase activity 1.52% (1/66) 7.39 0.005929 0.03694
GO:0006419 alanyl-tRNA aminoacylation 1.52% (1/66) 7.39 0.005929 0.03694
GO:0004813 alanine-tRNA ligase activity 1.52% (1/66) 7.39 0.005929 0.03694
GO:0008238 exopeptidase activity 3.03% (2/66) 4.06 0.006502 0.039014
GO:0004252 serine-type endopeptidase activity 3.03% (2/66) 4.2 0.005407 0.039815
GO:0008175 tRNA methyltransferase activity 1.52% (1/66) 7.17 0.006913 0.039999
GO:0006082 organic acid metabolic process 4.55% (3/66) 2.9 0.007789 0.040704
GO:0043436 oxoacid metabolic process 4.55% (3/66) 2.9 0.007737 0.04178
GO:0019752 carboxylic acid metabolic process 4.55% (3/66) 2.9 0.007737 0.04178
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_175 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_223 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_206 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_258 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_295 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_99 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_106 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_277 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_151 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_73 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_95 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_156 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_171 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_240 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_285 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_311 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_332 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_373 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_407 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_410 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_460 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_493 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_534 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_545 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_547 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_350 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_125 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_130 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_134 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_230 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_241 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_11 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.022 Archaeplastida Compare
Sequences (66) (download table)

InterPro Domains

GO Terms

Family Terms