Coexpression cluster: Cluster_7 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 13.11% (8/61) 5.18 0.0 0.0
GO:0097159 organic cyclic compound binding 40.98% (25/61) 2.03 0.0 0.0
GO:1901363 heterocyclic compound binding 40.98% (25/61) 2.03 0.0 0.0
GO:0003674 molecular_function 65.57% (40/61) 1.21 0.0 0.0
GO:0006082 organic acid metabolic process 13.11% (8/61) 4.25 0.0 0.0
GO:0019752 carboxylic acid metabolic process 13.11% (8/61) 4.25 0.0 0.0
GO:0043436 oxoacid metabolic process 13.11% (8/61) 4.25 0.0 0.0
GO:0036094 small molecule binding 27.87% (17/61) 2.44 0.0 0.0
GO:0005488 binding 47.54% (29/61) 1.54 0.0 0.0
GO:0044281 small molecule metabolic process 14.75% (9/61) 3.78 0.0 0.0
GO:0000166 nucleotide binding 26.23% (16/61) 2.41 0.0 0.0
GO:1901265 nucleoside phosphate binding 26.23% (16/61) 2.41 0.0 0.0
GO:0043168 anion binding 24.59% (15/61) 2.28 0.0 4e-06
GO:0003723 RNA binding 11.48% (7/61) 3.85 1e-06 8e-06
GO:0035639 purine ribonucleoside triphosphate binding 21.31% (13/61) 2.33 1e-06 1.8e-05
GO:0008652 cellular amino acid biosynthetic process 6.56% (4/61) 5.58 2e-06 2.1e-05
GO:0032553 ribonucleotide binding 21.31% (13/61) 2.24 3e-06 3e-05
GO:0097367 carbohydrate derivative binding 21.31% (13/61) 2.23 3e-06 3e-05
GO:0032555 purine ribonucleotide binding 21.31% (13/61) 2.25 2e-06 3e-05
GO:0017076 purine nucleotide binding 21.31% (13/61) 2.24 3e-06 3.1e-05
GO:0005737 cytoplasm 6.56% (4/61) 5.33 3e-06 3.2e-05
GO:0003676 nucleic acid binding 19.67% (12/61) 2.17 1.1e-05 0.000106
GO:0043167 ion binding 26.23% (16/61) 1.75 1.2e-05 0.00011
GO:0005524 ATP binding 18.03% (11/61) 2.27 1.4e-05 0.000124
GO:0032977 membrane insertase activity 3.28% (2/61) 8.09 2.1e-05 0.000171
GO:0008565 protein transporter activity 3.28% (2/61) 8.09 2.1e-05 0.000171
GO:0008144 drug binding 18.03% (11/61) 2.2 2.3e-05 0.000179
GO:0030554 adenyl nucleotide binding 18.03% (11/61) 2.17 2.7e-05 0.000195
GO:0032559 adenyl ribonucleotide binding 18.03% (11/61) 2.18 2.6e-05 0.000195
GO:1901607 alpha-amino acid biosynthetic process 4.92% (3/61) 5.57 3.6e-05 0.000249
GO:0006547 histidine metabolic process 3.28% (2/61) 7.61 4.4e-05 0.000282
GO:0000105 histidine biosynthetic process 3.28% (2/61) 7.61 4.4e-05 0.000282
GO:0052803 imidazole-containing compound metabolic process 3.28% (2/61) 7.61 4.4e-05 0.000282
GO:0006418 tRNA aminoacylation for protein translation 4.92% (3/61) 5.35 5.6e-05 0.000346
GO:0046394 carboxylic acid biosynthetic process 6.56% (4/61) 4.18 7.2e-05 0.00038
GO:0016053 organic acid biosynthetic process 6.56% (4/61) 4.18 7.2e-05 0.00038
GO:0004812 aminoacyl-tRNA ligase activity 4.92% (3/61) 5.24 7.1e-05 0.000391
GO:0043038 amino acid activation 4.92% (3/61) 5.24 7.1e-05 0.000391
GO:0043039 tRNA aminoacylation 4.92% (3/61) 5.24 7.1e-05 0.000391
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.92% (3/61) 5.24 7.1e-05 0.000391
GO:0044424 intracellular part 14.75% (9/61) 2.27 9.5e-05 0.000488
GO:1901605 alpha-amino acid metabolic process 4.92% (3/61) 5.02 0.000112 0.00056
GO:0044464 cell part 14.75% (9/61) 2.21 0.00013 0.000633
GO:0044283 small molecule biosynthetic process 6.56% (4/61) 3.9 0.000153 0.000712
GO:1901566 organonitrogen compound biosynthetic process 9.84% (6/61) 2.9 0.00015 0.000717
GO:0140101 catalytic activity, acting on a tRNA 4.92% (3/61) 4.66 0.000236 0.001079
GO:0006399 tRNA metabolic process 4.92% (3/61) 4.57 0.000282 0.00126
GO:0017111 nucleoside-triphosphatase activity 8.2% (5/61) 3.01 0.000392 0.001717
GO:0016462 pyrophosphatase activity 8.2% (5/61) 2.92 0.00052 0.002228
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 8.2% (5/61) 2.9 0.000563 0.002365
GO:0016817 hydrolase activity, acting on acid anhydrides 8.2% (5/61) 2.89 0.000586 0.002365
GO:0008152 metabolic process 27.87% (17/61) 1.22 0.000583 0.002399
GO:0034660 ncRNA metabolic process 4.92% (3/61) 4.19 0.000611 0.002422
GO:0016874 ligase activity 4.92% (3/61) 4.15 0.00066 0.002567
GO:0005575 cellular_component 19.67% (12/61) 1.54 0.00068 0.002595
GO:0009073 aromatic amino acid family biosynthetic process 3.28% (2/61) 5.61 0.000781 0.002929
GO:0034641 cellular nitrogen compound metabolic process 11.48% (7/61) 2.19 0.000841 0.003099
GO:0003824 catalytic activity 31.15% (19/61) 1.08 0.000869 0.003146
GO:1901564 organonitrogen compound metabolic process 18.03% (11/61) 1.59 0.000921 0.003279
GO:0004386 helicase activity 3.28% (2/61) 5.2 0.001364 0.004775
GO:0004358 glutamate N-acetyltransferase activity 1.64% (1/61) 9.41 0.001467 0.00497
GO:0003879 ATP phosphoribosyltransferase activity 1.64% (1/61) 9.41 0.001467 0.00497
GO:0051287 NAD binding 3.28% (2/61) 5.13 0.001515 0.00505
GO:0140098 catalytic activity, acting on RNA 4.92% (3/61) 3.72 0.001561 0.005122
GO:0009072 aromatic amino acid family metabolic process 3.28% (2/61) 5.02 0.001755 0.005672
GO:0044249 cellular biosynthetic process 9.84% (6/61) 2.21 0.001867 0.005852
GO:0044238 primary metabolic process 21.31% (13/61) 1.3 0.001864 0.005932
GO:1901576 organic substance biosynthetic process 9.84% (6/61) 2.13 0.002457 0.007588
GO:0071704 organic substance metabolic process 21.31% (13/61) 1.24 0.002697 0.008208
GO:0006525 arginine metabolic process 1.64% (1/61) 8.41 0.002932 0.008673
GO:0006526 arginine biosynthetic process 1.64% (1/61) 8.41 0.002932 0.008673
GO:0006807 nitrogen compound metabolic process 18.03% (11/61) 1.35 0.003373 0.009839
GO:0009058 biosynthetic process 9.84% (6/61) 2.0 0.003806 0.010948
GO:0046483 heterocycle metabolic process 8.2% (5/61) 2.24 0.004159 0.011803
GO:0006725 cellular aromatic compound metabolic process 8.2% (5/61) 2.23 0.004257 0.011919
GO:0006433 prolyl-tRNA aminoacylation 1.64% (1/61) 7.83 0.004395 0.011987
GO:0004827 proline-tRNA ligase activity 1.64% (1/61) 7.83 0.004395 0.011987
GO:1901360 organic cyclic compound metabolic process 8.2% (5/61) 2.19 0.004798 0.012918
GO:0044237 cellular metabolic process 18.03% (11/61) 1.25 0.005609 0.014909
GO:0004176 ATP-dependent peptidase activity 1.64% (1/61) 7.41 0.005856 0.015372
GO:0050662 coenzyme binding 4.92% (3/61) 3.03 0.00598 0.015504
GO:0009987 cellular process 19.67% (12/61) 1.15 0.006766 0.017328
GO:0003885 D-arabinono-1,4-lactone oxidase activity 1.64% (1/61) 7.09 0.007315 0.018287
GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor 1.64% (1/61) 7.09 0.007315 0.018287
GO:0046838 phosphorylated carbohydrate dephosphorylation 1.64% (1/61) 6.83 0.008771 0.020932
GO:0046855 inositol phosphate dephosphorylation 1.64% (1/61) 6.83 0.008771 0.020932
GO:0071545 inositol phosphate catabolic process 1.64% (1/61) 6.83 0.008771 0.020932
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 3.28% (2/61) 3.86 0.008487 0.020967
GO:0046174 polyol catabolic process 1.64% (1/61) 6.61 0.010226 0.022139
GO:1901616 organic hydroxy compound catabolic process 1.64% (1/61) 6.61 0.010226 0.022139
GO:0009084 glutamine family amino acid biosynthetic process 1.64% (1/61) 6.61 0.010226 0.022139
GO:0043647 inositol phosphate metabolic process 1.64% (1/61) 6.61 0.010226 0.022139
GO:0009064 glutamine family amino acid metabolic process 1.64% (1/61) 6.61 0.010226 0.022139
GO:0016597 amino acid binding 1.64% (1/61) 6.61 0.010226 0.022139
GO:0046164 alcohol catabolic process 1.64% (1/61) 6.61 0.010226 0.022139
GO:0016743 carboxyl- or carbamoyltransferase activity 1.64% (1/61) 6.61 0.010226 0.022139
GO:0044444 cytoplasmic part 6.56% (4/61) 2.28 0.009448 0.022292
GO:0008150 biological_process 31.15% (19/61) 0.76 0.011273 0.024157
GO:0016763 transferase activity, transferring pentosyl groups 1.64% (1/61) 6.24 0.013129 0.02703
GO:0005852 eukaryotic translation initiation factor 3 complex 1.64% (1/61) 6.24 0.013129 0.02703
GO:0043177 organic acid binding 1.64% (1/61) 6.24 0.013129 0.02703
GO:0031406 carboxylic acid binding 1.64% (1/61) 6.24 0.013129 0.02703
GO:0043226 organelle 6.56% (4/61) 2.13 0.013435 0.027129
GO:0043229 intracellular organelle 6.56% (4/61) 2.13 0.013435 0.027129
GO:0016070 RNA metabolic process 4.92% (3/61) 2.54 0.01508 0.03016
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.64% (1/61) 5.95 0.016023 0.031744
GO:0055114 oxidation-reduction process 8.2% (5/61) 1.64 0.021809 0.040891
GO:0098805 whole membrane 1.64% (1/61) 5.51 0.021787 0.041218
GO:0006066 alcohol metabolic process 1.64% (1/61) 5.51 0.021787 0.041218
GO:0019751 polyol metabolic process 1.64% (1/61) 5.51 0.021787 0.041218
GO:0005741 mitochondrial outer membrane 1.64% (1/61) 5.51 0.021787 0.041218
GO:0031968 organelle outer membrane 1.64% (1/61) 5.51 0.021787 0.041218
GO:0003924 GTPase activity 3.28% (2/61) 3.1 0.022951 0.042653
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.044 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_57 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_109 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.067 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.049 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_233 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.038 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_105 0.042 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_222 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.064 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_276 0.042 Archaeplastida Compare
Gingko biloba HCCA Cluster_315 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_338 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.047 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.055 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.064 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_220 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_266 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_40 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.085 Archaeplastida Compare
Picea abies HCCA Cluster_229 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_427 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_469 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_6 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_81 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.111 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.039 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_204 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_348 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.066 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.067 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.044 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.059 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.056 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_21 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_166 0.021 Archaeplastida Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms