Coexpression cluster: Cluster_244 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 59.68% (37/62) 0.86 1.3e-05 0.00331
GO:0016874 ligase activity 8.06% (5/62) 3.83 2.8e-05 0.003383
GO:0006082 organic acid metabolic process 8.06% (5/62) 3.0 0.000404 0.009037
GO:0006807 nitrogen compound metabolic process 24.19% (15/62) 1.56 0.000114 0.00936
GO:0043436 oxoacid metabolic process 8.06% (5/62) 3.01 0.000391 0.009615
GO:0019752 carboxylic acid metabolic process 8.06% (5/62) 3.01 0.000391 0.009615
GO:0034641 cellular nitrogen compound metabolic process 12.9% (8/62) 1.98 0.000897 0.010512
GO:0042558 pteridine-containing compound metabolic process 3.23% (2/62) 5.88 0.000522 0.010707
GO:1901360 organic cyclic compound metabolic process 11.29% (7/62) 2.17 0.000885 0.010884
GO:0035639 purine ribonucleoside triphosphate binding 16.13% (10/62) 1.73 0.000755 0.010918
GO:0042398 cellular modified amino acid biosynthetic process 3.23% (2/62) 5.54 0.000846 0.010949
GO:0003824 catalytic activity 38.71% (24/62) 1.05 0.000178 0.010953
GO:0006399 tRNA metabolic process 4.84% (3/62) 4.03 0.000838 0.011449
GO:0006725 cellular aromatic compound metabolic process 11.29% (7/62) 2.22 0.00075 0.011538
GO:0071704 organic substance metabolic process 27.42% (17/62) 1.31 0.000291 0.011926
GO:0042559 pteridine-containing compound biosynthetic process 3.23% (2/62) 6.08 0.000389 0.011966
GO:0006760 folic acid-containing compound metabolic process 3.23% (2/62) 6.08 0.000389 0.011966
GO:0046483 heterocycle metabolic process 11.29% (7/62) 2.22 0.000737 0.012091
GO:0005488 binding 37.1% (23/62) 0.91 0.001087 0.01216
GO:0043167 ion binding 24.19% (15/62) 1.24 0.001248 0.01228
GO:0006457 protein folding 4.84% (3/62) 3.84 0.001211 0.012417
GO:1901564 organonitrogen compound metabolic process 19.35% (12/62) 1.54 0.000709 0.012461
GO:0044249 cellular biosynthetic process 11.29% (7/62) 2.1 0.001182 0.012644
GO:0009987 cellular process 25.81% (16/62) 1.26 0.000696 0.013168
GO:0009396 folic acid-containing compound biosynthetic process 3.23% (2/62) 6.32 0.000275 0.013539
GO:0032553 ribonucleotide binding 16.13% (10/62) 1.58 0.001637 0.013884
GO:0017076 purine nucleotide binding 16.13% (10/62) 1.59 0.001596 0.01402
GO:0008152 metabolic process 32.26% (20/62) 0.96 0.001793 0.014232
GO:0097367 carbohydrate derivative binding 16.13% (10/62) 1.57 0.001738 0.014256
GO:1901576 organic substance biosynthetic process 11.29% (7/62) 2.03 0.001577 0.014364
GO:0034660 ncRNA metabolic process 4.84% (3/62) 3.63 0.001869 0.014368
GO:0032555 purine ribonucleotide binding 16.13% (10/62) 1.6 0.001532 0.014494
GO:1901566 organonitrogen compound biosynthetic process 8.06% (5/62) 2.48 0.002053 0.014853
GO:0044237 cellular metabolic process 20.97% (13/62) 1.29 0.001995 0.01487
GO:0019438 aromatic compound biosynthetic process 6.45% (4/62) 2.84 0.002379 0.016723
GO:0018130 heterocycle biosynthetic process 6.45% (4/62) 2.82 0.002522 0.017232
GO:0044281 small molecule metabolic process 8.06% (5/62) 2.36 0.002929 0.019471
GO:0046394 carboxylic acid biosynthetic process 4.84% (3/62) 3.1 0.005212 0.020035
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.23% (2/62) 4.23 0.005132 0.020039
GO:0004812 aminoacyl-tRNA ligase activity 3.23% (2/62) 4.23 0.005132 0.020039
GO:0016053 organic acid biosynthetic process 4.84% (3/62) 3.09 0.005307 0.020084
GO:0016070 RNA metabolic process 6.45% (4/62) 2.54 0.004999 0.020161
GO:0036094 small molecule binding 16.13% (10/62) 1.37 0.004838 0.020171
GO:0008237 metallopeptidase activity 3.23% (2/62) 4.26 0.004921 0.020175
GO:0008150 biological_process 38.71% (24/62) 0.73 0.004822 0.020454
GO:1901362 organic cyclic compound biosynthetic process 6.45% (4/62) 2.69 0.003502 0.020513
GO:0044271 cellular nitrogen compound biosynthetic process 8.06% (5/62) 2.29 0.003589 0.020531
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.61% (1/62) 7.78 0.004535 0.020659
GO:0016882 cyclo-ligase activity 1.61% (1/62) 7.78 0.004535 0.020659
GO:0009086 methionine biosynthetic process 1.61% (1/62) 7.78 0.004535 0.020659
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.61% (1/62) 7.78 0.004535 0.020659
GO:0030272 5-formyltetrahydrofolate cyclo-ligase activity 1.61% (1/62) 7.78 0.004535 0.020659
GO:0004852 uroporphyrinogen-III synthase activity 1.61% (1/62) 7.78 0.004535 0.020659
GO:1901265 nucleoside phosphate binding 16.13% (10/62) 1.44 0.003446 0.020674
GO:0000166 nucleotide binding 16.13% (10/62) 1.44 0.003446 0.020674
GO:0006418 tRNA aminoacylation for protein translation 3.23% (2/62) 4.29 0.004714 0.020706
GO:0051082 unfolded protein binding 3.23% (2/62) 4.57 0.003208 0.020768
GO:0043170 macromolecule metabolic process 17.74% (11/62) 1.28 0.004817 0.020789
GO:0043168 anion binding 16.13% (10/62) 1.4 0.00406 0.020808
GO:0005524 ATP binding 12.9% (8/62) 1.6 0.004663 0.020854
GO:0044238 primary metabolic process 22.58% (14/62) 1.12 0.003995 0.020911
GO:0004222 metalloendopeptidase activity 3.23% (2/62) 4.46 0.003741 0.020915
GO:0006520 cellular amino acid metabolic process 4.84% (3/62) 3.26 0.003839 0.020988
GO:0006575 cellular modified amino acid metabolic process 3.23% (2/62) 4.43 0.003927 0.021001
GO:0009058 biosynthetic process 11.29% (7/62) 1.84 0.003355 0.021165
GO:0043039 tRNA aminoacylation 3.23% (2/62) 4.14 0.00579 0.02126
GO:0043038 amino acid activation 3.23% (2/62) 4.14 0.00579 0.02126
GO:0009103 lipopolysaccharide biosynthetic process 1.61% (1/62) 7.2 0.006795 0.022287
GO:0008653 lipopolysaccharide metabolic process 1.61% (1/62) 7.2 0.006795 0.022287
GO:0004784 superoxide dismutase activity 1.61% (1/62) 7.2 0.006795 0.022287
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 1.61% (1/62) 7.2 0.006795 0.022287
GO:0008184 glycogen phosphorylase activity 1.61% (1/62) 7.2 0.006795 0.022287
GO:0004645 phosphorylase activity 1.61% (1/62) 7.2 0.006795 0.022287
GO:0006555 methionine metabolic process 1.61% (1/62) 7.2 0.006795 0.022287
GO:0140098 catalytic activity, acting on RNA 4.84% (3/62) 2.95 0.006958 0.022522
GO:0008144 drug binding 12.9% (8/62) 1.52 0.006366 0.02303
GO:0032559 adenyl ribonucleotide binding 12.9% (8/62) 1.45 0.008662 0.027673
GO:0030554 adenyl nucleotide binding 12.9% (8/62) 1.44 0.008816 0.027805
GO:0008172 S-methyltransferase activity 1.61% (1/62) 6.78 0.00905 0.027827
GO:0051205 protein insertion into membrane 1.61% (1/62) 6.78 0.00905 0.027827
GO:0009108 coenzyme biosynthetic process 3.23% (2/62) 3.7 0.01049 0.031857
GO:0044283 small molecule biosynthetic process 4.84% (3/62) 2.71 0.010946 0.032441
GO:0006508 proteolysis 6.45% (4/62) 2.22 0.010819 0.032456
GO:0000097 sulfur amino acid biosynthetic process 1.61% (1/62) 6.46 0.011299 0.033091
GO:0140101 catalytic activity, acting on a tRNA 3.23% (2/62) 3.55 0.012649 0.036608
GO:0043604 amide biosynthetic process 4.84% (3/62) 2.59 0.013757 0.039352
GO:0006732 coenzyme metabolic process 3.23% (2/62) 3.46 0.0143 0.040435
GO:0000096 sulfur amino acid metabolic process 1.61% (1/62) 5.98 0.015784 0.041307
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity 1.61% (1/62) 5.98 0.015784 0.041307
GO:0006801 superoxide metabolic process 1.61% (1/62) 5.98 0.015784 0.041307
GO:0072593 reactive oxygen species metabolic process 1.61% (1/62) 5.98 0.015784 0.041307
GO:0003697 single-stranded DNA binding 1.61% (1/62) 5.98 0.015784 0.041307
GO:0031072 heat shock protein binding 1.61% (1/62) 5.98 0.015784 0.041307
GO:0051188 cofactor biosynthetic process 3.23% (2/62) 3.43 0.014985 0.04189
GO:0016879 ligase activity, forming carbon-nitrogen bonds 3.23% (2/62) 3.28 0.018239 0.046255
GO:0090304 nucleic acid metabolic process 6.45% (4/62) 1.99 0.018192 0.046618
GO:0009067 aspartate family amino acid biosynthetic process 1.61% (1/62) 5.78 0.018018 0.046658
GO:0097159 organic cyclic compound binding 20.97% (13/62) 0.9 0.019143 0.047566
GO:1901363 heterocyclic compound binding 20.97% (13/62) 0.9 0.019096 0.047934
GO:0043603 cellular amide metabolic process 4.84% (3/62) 2.39 0.019685 0.048425
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.61% (1/62) 5.61 0.020248 0.048834
GO:0009066 aspartate family amino acid metabolic process 1.61% (1/62) 5.61 0.020248 0.048834
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_128 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_173 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_199 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_136 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_285 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_341 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_357 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_168 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_178 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_55 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_266 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_495 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_31 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_219 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_250 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_252 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.038 Archaeplastida Compare
Vitis vinifera HCCA Cluster_179 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_211 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_107 0.019 Archaeplastida Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms