Coexpression cluster: Cluster_239 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005198 structural molecule activity 13.33% (8/60) 3.98 0.0 1e-05
GO:0043043 peptide biosynthetic process 11.67% (7/60) 3.98 0.0 1.2e-05
GO:0003735 structural constituent of ribosome 11.67% (7/60) 3.99 0.0 1.4e-05
GO:0006412 translation 11.67% (7/60) 4.02 0.0 1.5e-05
GO:0044444 cytoplasmic part 15.0% (9/60) 3.23 0.0 1.5e-05
GO:0043604 amide biosynthetic process 11.67% (7/60) 3.86 1e-06 1.6e-05
GO:1990904 ribonucleoprotein complex 11.67% (7/60) 3.83 1e-06 1.6e-05
GO:0043228 non-membrane-bounded organelle 11.67% (7/60) 3.76 1e-06 1.7e-05
GO:0043232 intracellular non-membrane-bounded organelle 11.67% (7/60) 3.76 1e-06 1.7e-05
GO:0006518 peptide metabolic process 11.67% (7/60) 3.8 1e-06 1.7e-05
GO:0005840 ribosome 11.67% (7/60) 4.03 0.0 1.9e-05
GO:0043603 cellular amide metabolic process 11.67% (7/60) 3.66 1e-06 2.4e-05
GO:0044424 intracellular part 23.33% (14/60) 2.42 0.0 2.5e-05
GO:0044464 cell part 23.33% (14/60) 2.16 2e-06 2.9e-05
GO:0032991 protein-containing complex 16.67% (10/60) 2.77 2e-06 3e-05
GO:1901566 organonitrogen compound biosynthetic process 13.33% (8/60) 3.2 2e-06 3.6e-05
GO:0043226 organelle 15.0% (9/60) 2.79 5e-06 7.1e-05
GO:0043229 intracellular organelle 15.0% (9/60) 2.79 5e-06 7.1e-05
GO:0044271 cellular nitrogen compound biosynthetic process 13.33% (8/60) 3.01 6e-06 7.8e-05
GO:0019898 extrinsic component of membrane 5.0% (3/60) 6.25 8e-06 9.5e-05
GO:0009654 photosystem II oxygen evolving complex 5.0% (3/60) 6.09 1.1e-05 0.000126
GO:0034645 cellular macromolecule biosynthetic process 11.67% (7/60) 3.13 1.5e-05 0.000163
GO:0005575 cellular_component 28.33% (17/60) 1.62 1.9e-05 0.000192
GO:1990204 oxidoreductase complex 5.0% (3/60) 5.83 2e-05 0.000195
GO:0034641 cellular nitrogen compound metabolic process 16.67% (10/60) 2.35 2.3e-05 0.000207
GO:0009523 photosystem II 5.0% (3/60) 5.77 2.2e-05 0.000212
GO:0044249 cellular biosynthetic process 15.0% (9/60) 2.51 2.5e-05 0.000223
GO:0009059 macromolecule biosynthetic process 11.67% (7/60) 2.99 2.8e-05 0.000233
GO:1901576 organic substance biosynthetic process 15.0% (9/60) 2.44 3.8e-05 0.000308
GO:0015979 photosynthesis 5.0% (3/60) 5.06 0.000101 0.0008
GO:0009521 photosystem 5.0% (3/60) 5.02 0.000109 0.000806
GO:0009058 biosynthetic process 15.0% (9/60) 2.25 0.000106 0.00081
GO:0044436 thylakoid part 5.0% (3/60) 4.92 0.000134 0.000962
GO:0019843 rRNA binding 3.33% (2/60) 6.37 0.000258 0.001796
GO:0005622 intracellular 8.33% (5/60) 3.02 0.000383 0.002591
GO:0008152 metabolic process 35.0% (21/60) 1.08 0.000415 0.002732
GO:0044237 cellular metabolic process 23.33% (14/60) 1.45 0.000441 0.002823
GO:0003674 molecular_function 53.33% (32/60) 0.7 0.000856 0.00534
GO:0009987 cellular process 25.0% (15/60) 1.21 0.001434 0.008717
GO:0005509 calcium ion binding 5.0% (3/60) 3.62 0.001889 0.010918
GO:1901564 organonitrogen compound metabolic process 18.33% (11/60) 1.46 0.001853 0.010979
GO:0044267 cellular protein metabolic process 13.33% (8/60) 1.78 0.002129 0.012016
GO:0008150 biological_process 40.0% (24/60) 0.78 0.002932 0.016157
GO:0006807 nitrogen compound metabolic process 20.0% (12/60) 1.28 0.003132 0.016871
GO:1902494 catalytic complex 5.0% (3/60) 3.34 0.00329 0.017326
GO:0051015 actin filament binding 1.67% (1/60) 7.83 0.004389 0.018912
GO:0004828 serine-tRNA ligase activity 1.67% (1/60) 7.83 0.004389 0.018912
GO:0030674 protein binding, bridging 1.67% (1/60) 7.83 0.004389 0.018912
GO:0060090 molecular adaptor activity 1.67% (1/60) 7.83 0.004389 0.018912
GO:0031167 rRNA methylation 1.67% (1/60) 7.83 0.004389 0.018912
GO:0006434 seryl-tRNA aminoacylation 1.67% (1/60) 7.83 0.004389 0.018912
GO:0043170 macromolecule metabolic process 18.33% (11/60) 1.33 0.003711 0.01912
GO:0098796 membrane protein complex 5.0% (3/60) 3.26 0.003867 0.019497
GO:0019538 protein metabolic process 15.0% (9/60) 1.5 0.00409 0.019783
GO:0044260 cellular macromolecule metabolic process 15.0% (9/60) 1.51 0.004016 0.019831
GO:0071704 organic substance metabolic process 23.33% (14/60) 1.08 0.004994 0.021137
GO:0008168 methyltransferase activity 5.0% (3/60) 2.92 0.007426 0.030877
GO:0044238 primary metabolic process 21.67% (13/60) 1.06 0.007822 0.031961
GO:0004853 uroporphyrinogen decarboxylase activity 1.67% (1/60) 6.83 0.008759 0.035183
GO:0016741 transferase activity, transferring one-carbon groups 5.0% (3/60) 2.79 0.009354 0.036947
GO:0001510 RNA methylation 1.67% (1/60) 6.51 0.010936 0.041805
GO:0000154 rRNA modification 1.67% (1/60) 6.51 0.010936 0.041805
GO:0016746 transferase activity, transferring acyl groups 5.0% (3/60) 2.67 0.011695 0.043993
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.066 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_129 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.063 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.055 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_3 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_39 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_107 0.057 Archaeplastida Compare
Zea mays HCCA Cluster_185 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_254 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.056 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_362 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_367 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.073 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_52 0.04 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_45 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.078 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_129 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_324 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.059 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_218 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_359 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_49 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_97 0.034 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_194 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_111 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.074 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_128 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.065 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_37 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_93 0.058 Archaeplastida Compare
Vitis vinifera HCCA Cluster_113 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_137 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.056 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_19 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.067 Archaeplastida Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms