Coexpression cluster: Cluster_230 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044238 primary metabolic process 30.16% (19/63) 1.42 4e-05 0.002415
GO:0009987 cellular process 30.16% (19/63) 1.43 3.6e-05 0.002916
GO:0044237 cellular metabolic process 26.98% (17/63) 1.59 2.7e-05 0.003271
GO:0006807 nitrogen compound metabolic process 25.4% (16/63) 1.54 7.3e-05 0.00356
GO:0071704 organic substance metabolic process 31.75% (20/63) 1.44 1.9e-05 0.004606
GO:0008652 cellular amino acid biosynthetic process 4.76% (3/63) 4.87 0.00015 0.006108
GO:0006520 cellular amino acid metabolic process 6.35% (4/63) 3.75 0.000225 0.007831
GO:0005789 endoplasmic reticulum membrane 3.17% (2/63) 6.12 0.000366 0.011155
GO:0006082 organic acid metabolic process 6.35% (4/63) 2.82 0.00251 0.025519
GO:0046394 carboxylic acid biosynthetic process 4.76% (3/63) 3.44 0.002725 0.025574
GO:0016053 organic acid biosynthetic process 4.76% (3/63) 3.44 0.002725 0.025574
GO:1901607 alpha-amino acid biosynthetic process 3.17% (2/63) 4.66 0.002833 0.0256
GO:0006725 cellular aromatic compound metabolic process 9.52% (6/63) 2.07 0.003055 0.025701
GO:0044283 small molecule biosynthetic process 4.76% (3/63) 3.14 0.004807 0.026064
GO:0043436 oxoacid metabolic process 6.35% (4/63) 2.83 0.002472 0.026225
GO:0046483 heterocycle metabolic process 9.52% (6/63) 2.07 0.00303 0.026401
GO:0004055 argininosuccinate synthase activity 1.59% (1/63) 7.71 0.004777 0.02649
GO:0036260 RNA capping 1.59% (1/63) 7.71 0.004777 0.02649
GO:0018279 protein N-linked glycosylation via asparagine 1.59% (1/63) 7.71 0.004777 0.02649
GO:0004560 alpha-L-fucosidase activity 1.59% (1/63) 7.71 0.004777 0.02649
GO:0015928 fucosidase activity 1.59% (1/63) 7.71 0.004777 0.02649
GO:0009452 7-methylguanosine RNA capping 1.59% (1/63) 7.71 0.004777 0.02649
GO:0018196 peptidyl-asparagine modification 1.59% (1/63) 7.71 0.004777 0.02649
GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor 1.59% (1/63) 7.71 0.004777 0.02649
GO:0019752 carboxylic acid metabolic process 6.35% (4/63) 2.83 0.002434 0.027001
GO:0008152 metabolic process 31.75% (20/63) 0.93 0.002399 0.027871
GO:1901360 organic cyclic compound metabolic process 9.52% (6/63) 2.02 0.00356 0.028021
GO:0043412 macromolecule modification 12.7% (8/63) 1.65 0.003728 0.028428
GO:0090304 nucleic acid metabolic process 7.94% (5/63) 2.3 0.003517 0.028605
GO:0006644 phospholipid metabolic process 3.17% (2/63) 4.42 0.003939 0.029125
GO:0010024 phytochromobilin biosynthetic process 1.59% (1/63) 8.71 0.002391 0.029173
GO:0006551 leucine metabolic process 1.59% (1/63) 8.71 0.002391 0.029173
GO:0051202 phytochromobilin metabolic process 1.59% (1/63) 8.71 0.002391 0.029173
GO:0009098 leucine biosynthetic process 1.59% (1/63) 8.71 0.002391 0.029173
GO:0050897 cobalt ion binding 1.59% (1/63) 8.71 0.002391 0.029173
GO:0003852 2-isopropylmalate synthase activity 1.59% (1/63) 8.71 0.002391 0.029173
GO:0043170 macromolecule metabolic process 19.05% (12/63) 1.24 0.004099 0.029413
GO:1901605 alpha-amino acid metabolic process 3.17% (2/63) 4.35 0.004346 0.029454
GO:0009058 biosynthetic process 11.11% (7/63) 1.77 0.004303 0.029999
GO:1901564 organonitrogen compound metabolic process 19.05% (12/63) 1.41 0.001565 0.031816
GO:0006525 arginine metabolic process 1.59% (1/63) 7.12 0.007157 0.032949
GO:0009081 branched-chain amino acid metabolic process 1.59% (1/63) 7.12 0.007157 0.032949
GO:0006526 arginine biosynthetic process 1.59% (1/63) 7.12 0.007157 0.032949
GO:0004609 phosphatidylserine decarboxylase activity 1.59% (1/63) 7.12 0.007157 0.032949
GO:0005849 mRNA cleavage factor complex 1.59% (1/63) 7.12 0.007157 0.032949
GO:0009082 branched-chain amino acid biosynthetic process 1.59% (1/63) 7.12 0.007157 0.032949
GO:0006378 mRNA polyadenylation 1.59% (1/63) 7.12 0.007157 0.032949
GO:0044432 endoplasmic reticulum part 3.17% (2/63) 5.01 0.001763 0.033081
GO:0008654 phospholipid biosynthetic process 3.17% (2/63) 5.12 0.001501 0.033304
GO:0016070 RNA metabolic process 6.35% (4/63) 2.43 0.006496 0.034456
GO:1901576 organic substance biosynthetic process 11.11% (7/63) 1.97 0.001983 0.034567
GO:0044281 small molecule metabolic process 7.94% (5/63) 2.59 0.001467 0.035787
GO:0044249 cellular biosynthetic process 11.11% (7/63) 2.06 0.001427 0.03869
GO:0006139 nucleobase-containing compound metabolic process 7.94% (5/63) 1.96 0.009268 0.041877
GO:0003729 mRNA binding 1.59% (1/63) 6.39 0.0119 0.049214
GO:0031683 G-protein beta/gamma-subunit complex binding 1.59% (1/63) 6.39 0.0119 0.049214
GO:0006464 cellular protein modification process 11.11% (7/63) 1.51 0.011336 0.049392
GO:0036211 protein modification process 11.11% (7/63) 1.51 0.011336 0.049392
GO:0017076 purine nucleotide binding 14.29% (9/63) 1.24 0.01282 0.049654
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_31 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_109 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_121 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_162 0.046 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_204 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_214 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_281 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_37 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_63 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_236 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_44 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_199 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_215 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_235 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_290 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_304 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_51 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_132 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_249 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_292 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_310 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_322 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_357 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_365 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_63 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_155 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_158 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_171 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_208 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_51 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_161 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_177 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_228 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_298 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_330 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_421 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_509 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_12 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_138 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_158 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_204 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_262 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_266 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_315 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_325 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_360 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_363 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_83 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_93 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_205 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_58 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_256 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_268 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_272 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_102 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_240 0.019 Archaeplastida Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms