Coexpression cluster: Cluster_310 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090304 nucleic acid metabolic process 7.27% (8/110) 2.66 4.2e-05 0.011897
GO:0006310 DNA recombination 1.82% (2/110) 6.75 0.000144 0.013719
GO:0005488 binding 30.91% (34/110) 0.92 0.000111 0.015789
GO:0003676 nucleic acid binding 12.73% (14/110) 1.54 0.000319 0.018184
GO:0003674 molecular_function 43.64% (48/110) 0.62 0.000416 0.019748
GO:0006139 nucleobase-containing compound metabolic process 7.27% (8/110) 2.26 0.00029 0.020682
GO:0006974 cellular response to DNA damage stimulus 2.73% (3/110) 3.92 0.001059 0.021565
GO:0033554 cellular response to stress 2.73% (3/110) 3.92 0.001059 0.021565
GO:0051716 cellular response to stimulus 2.73% (3/110) 3.92 0.001059 0.021565
GO:0016592 mediator complex 1.82% (2/110) 5.47 0.000919 0.023815
GO:0006281 DNA repair 2.73% (3/110) 4.02 0.000867 0.02471
GO:0006725 cellular aromatic compound metabolic process 7.27% (8/110) 2.06 0.000714 0.025452
GO:1901360 organic cyclic compound metabolic process 7.27% (8/110) 2.02 0.000859 0.027187
GO:0046483 heterocycle metabolic process 7.27% (8/110) 2.07 0.000689 0.028067
GO:0006807 nitrogen compound metabolic process 15.45% (17/110) 1.13 0.001849 0.032928
GO:0003712 transcription coregulator activity 1.82% (2/110) 4.61 0.003068 0.033628
GO:0044422 organelle part 4.55% (5/110) 2.36 0.002995 0.034146
GO:0044446 intracellular organelle part 4.55% (5/110) 2.36 0.002995 0.034146
GO:0043170 macromolecule metabolic process 14.55% (16/110) 1.17 0.001841 0.034978
GO:0000725 recombinational repair 0.91% (1/110) 7.56 0.005285 0.03586
GO:0090174 organelle membrane fusion 0.91% (1/110) 7.56 0.005285 0.03586
GO:0048284 organelle fusion 0.91% (1/110) 7.56 0.005285 0.03586
GO:0051253 negative regulation of RNA metabolic process 0.91% (1/110) 7.56 0.005285 0.03586
GO:1902679 negative regulation of RNA biosynthetic process 0.91% (1/110) 7.56 0.005285 0.03586
GO:1903507 negative regulation of nucleic acid-templated transcription 0.91% (1/110) 7.56 0.005285 0.03586
GO:0006906 vesicle fusion 0.91% (1/110) 7.56 0.005285 0.03586
GO:0016050 vesicle organization 0.91% (1/110) 7.56 0.005285 0.03586
GO:0061025 membrane fusion 0.91% (1/110) 7.56 0.005285 0.03586
GO:0048280 vesicle fusion with Golgi apparatus 0.91% (1/110) 7.56 0.005285 0.03586
GO:0045892 negative regulation of transcription, DNA-templated 0.91% (1/110) 7.56 0.005285 0.03586
GO:0097159 organic cyclic compound binding 19.09% (21/110) 0.93 0.002915 0.036126
GO:1901363 heterocyclic compound binding 19.09% (21/110) 0.93 0.002915 0.036126
GO:0044599 AP-5 adaptor complex 0.91% (1/110) 8.56 0.002646 0.037702
GO:0000724 double-strand break repair via homologous recombination 0.91% (1/110) 8.56 0.002646 0.037702
GO:0000228 nuclear chromosome 0.91% (1/110) 8.56 0.002646 0.037702
GO:0044237 cellular metabolic process 15.45% (17/110) 1.03 0.003716 0.037821
GO:0044428 nuclear part 2.73% (3/110) 3.42 0.002852 0.038709
GO:0009987 cellular process 17.27% (19/110) 0.96 0.0037 0.039052
GO:0018208 peptidyl-proline modification 1.82% (2/110) 4.39 0.004121 0.039147
GO:0000413 protein peptidyl-prolyl isomerization 1.82% (2/110) 4.39 0.004121 0.039147
GO:0016070 RNA metabolic process 4.55% (5/110) 2.42 0.002505 0.041996
GO:0006259 DNA metabolic process 2.73% (3/110) 3.15 0.00484 0.044494
GO:0034641 cellular nitrogen compound metabolic process 7.27% (8/110) 1.53 0.00676 0.044806
GO:0044451 nucleoplasm part 1.82% (2/110) 4.01 0.006938 0.04494
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 0.91% (1/110) 6.98 0.007916 0.046045
GO:0003910 DNA ligase (ATP) activity 0.91% (1/110) 6.98 0.007916 0.046045
GO:0006338 chromatin remodeling 0.91% (1/110) 6.98 0.007916 0.046045
GO:0016886 ligase activity, forming phosphoric ester bonds 0.91% (1/110) 6.98 0.007916 0.046045
GO:0003909 DNA ligase activity 0.91% (1/110) 6.98 0.007916 0.046045
GO:0016853 isomerase activity 2.73% (3/110) 2.85 0.008489 0.048386
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_11 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_58 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_131 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_147 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_163 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_193 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_202 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_248 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_255 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_257 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_116 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.042 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_212 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_186 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_102 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_185 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_258 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.033 Archaeplastida Compare
Zea mays HCCA Cluster_281 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.049 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_111 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_125 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.036 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_166 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_106 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_152 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_158 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.061 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_3 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_32 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_64 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_203 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_380 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_412 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_420 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_437 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_485 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_519 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_522 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_21 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.051 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.036 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_193 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_214 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_283 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_286 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_314 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_31 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_66 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.05 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_172 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_201 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.054 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_221 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.042 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.056 Archaeplastida Compare
Vitis vinifera HCCA Cluster_62 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_106 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_154 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_196 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_218 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_230 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_112 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_122 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_134 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_139 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_151 0.037 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_152 0.019 Archaeplastida Compare
Sequences (110) (download table)

InterPro Domains

GO Terms

Family Terms