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Heatmap: Cluster_8 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
60.94 46.61 20.39 8.67 13.1 51.88 116.0 132.67 156.07 189.37 157.34 123.2 65.99 160.36 21.86 803.93 61.69 65.5 49.96 98.79 1.05 1.77 34.1 29.47 55.38 32.09
9.28 15.71 18.6 20.33 18.75 15.85 16.29 18.32 15.28 16.91 14.66 15.6 9.72 17.33 12.29 59.17 11.63 18.27 11.68 13.23 11.29 5.69 16.61 9.5 17.04 11.87
39.6 42.19 43.98 49.84 76.85 127.88 195.0 174.42 157.45 153.11 109.15 72.63 37.17 98.2 65.87 1544.46 99.31 109.27 94.46 116.49 2.47 23.63 45.44 43.32 79.95 44.98
16.81 37.94 54.5 42.95 31.07 30.31 36.88 38.27 34.94 36.05 39.97 45.28 10.66 39.35 51.47 107.35 38.37 48.12 45.13 42.14 40.02 18.99 54.51 52.84 38.81 56.3
2.49 1.51 1.51 1.69 0.86 0.55 0.7 1.14 0.5 0.68 0.94 0.91 2.52 8.91 0.34 49.24 1.26 1.34 0.79 0.95 0.15 0.47 0.73 0.13 2.82 1.67
0.02 0.28 0.35 0.12 0.05 0.08 0.2 0.02 0.0 0.29 0.3 0.16 0.03 0.24 1.08 788.9 0.71 0.44 0.31 0.93 0.02 0.02 0.0 0.0 0.0 0.03
7.64 23.01 44.01 45.15 27.49 22.56 29.66 39.53 25.09 20.37 17.74 17.48 3.64 15.1 28.72 407.56 21.58 32.59 28.74 23.85 0.71 6.3 9.39 14.31 39.05 35.8
9.3 7.49 5.38 4.11 3.68 3.8 4.5 5.19 4.82 4.7 4.77 4.72 6.91 0.73 1.93 142.76 2.04 4.4 3.46 3.74 0.42 2.75 2.47 3.21 5.83 2.45
10.3 12.83 13.99 15.81 17.68 25.64 27.25 25.78 35.03 31.31 28.5 28.06 9.97 84.54 33.91 261.51 29.8 27.34 29.91 25.25 1.79 16.66 14.18 11.88 16.17 18.42
7.07 8.07 9.2 9.94 10.87 11.22 18.89 18.05 22.82 20.44 19.88 15.18 6.58 39.15 14.72 129.48 14.31 13.72 12.07 12.24 1.69 11.12 9.31 9.87 15.8 10.45
0.09 0.07 0.12 0.9 2.89 5.31 7.71 5.8 10.77 8.4 8.17 6.12 0.0 11.03 6.39 220.47 3.66 1.98 1.74 1.71 0.64 0.26 13.05 4.56 3.82 3.62
2.86 3.0 2.79 2.63 1.28 0.76 2.1 2.25 4.32 3.69 4.03 2.97 2.33 7.04 8.05 386.52 5.27 4.4 4.25 2.15 1.18 0.65 5.09 4.29 5.2 3.4
0.09 0.59 0.64 0.36 0.21 0.18 0.28 0.07 0.06 0.27 0.17 0.16 0.16 0.72 2.16 1342.98 1.45 0.72 0.57 1.81 0.09 1.35 0.48 0.03 0.13 0.17
phosphorelay signal transduction system 14.87 22.44 34.46 36.43 18.73 10.18 15.61 18.1 6.53 9.95 11.56 16.12 21.5 12.18 3.75 346.01 6.84 5.76 6.04 10.28 2.86 62.6 3.49 8.4 32.3 37.33
0.0 0.02 0.02 0.02 0.0 0.02 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.03 0.06 23.95 0.02 0.01 0.04 0.02 0.0 0.02 0.01 0.0 0.04 0.0
30.04 27.23 29.0 24.56 14.31 8.72 15.86 22.8 15.4 24.73 28.51 32.86 40.08 17.11 11.34 1362.77 20.53 18.3 14.24 18.79 1.83 11.34 5.29 9.18 20.72 14.46
1.04 0.23 0.04 0.09 0.25 0.23 0.34 0.42 0.42 0.91 1.72 1.72 1.35 25.78 15.42 78.02 27.59 12.08 8.47 9.93 33.03 19.67 54.55 49.47 32.55 30.04
1.92 0.54 0.57 0.78 0.98 0.8 1.23 0.94 1.01 1.56 1.74 1.77 1.91 28.3 17.24 82.38 31.49 17.94 12.65 10.82 29.36 15.13 44.88 42.0 28.29 31.56
9.89 16.94 28.65 35.73 51.71 54.26 68.62 67.0 51.59 52.7 49.22 40.69 12.95 38.12 30.45 307.1 75.44 37.0 31.4 27.8 1.2 21.76 32.84 23.05 27.04 23.05
0.2 0.85 2.31 2.85 2.82 4.83 3.76 2.75 2.01 2.65 2.01 2.19 0.31 16.88 2.04 78.2 2.43 2.73 2.78 1.6 0.04 0.33 0.5 0.9 2.1 3.54
0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.32 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 5.53 0.0 0.0 0.05 0.0 0.0 0.0 0.05 0.0 0.0 0.0
0.0 0.0 0.0 0.02 0.02 0.05 0.08 0.02 0.02 0.06 0.0 0.02 0.0 0.07 0.0 1.72 0.05 0.13 0.08 0.03 0.19 0.03 0.02 0.0 0.03 0.07
11.72 15.03 16.18 16.26 16.28 16.88 18.22 17.47 19.96 20.13 17.72 17.08 12.98 12.57 11.47 49.2 11.47 16.22 10.72 15.36 7.32 12.32 14.89 11.2 12.7 11.53
0.7 2.75 6.11 8.28 12.63 16.84 16.03 15.75 22.69 17.17 16.12 12.94 0.43 8.56 13.92 85.07 8.2 9.23 8.86 7.31 1.15 17.43 17.61 10.33 14.61 10.87
1.25 2.73 5.68 9.71 20.0 32.43 31.63 19.01 17.52 21.79 13.72 8.85 1.98 10.88 9.78 902.65 15.76 10.81 10.38 15.22 0.79 1.56 13.11 6.47 8.83 6.81
32.74 24.06 15.43 15.64 20.02 23.57 40.4 39.74 44.79 42.06 34.6 27.75 28.75 24.1 25.06 130.81 26.19 43.25 31.83 24.65 8.75 13.56 31.28 31.77 25.78 21.42
150.12 97.83 45.78 34.37 53.79 114.49 154.56 165.93 196.19 165.81 136.84 102.51 129.08 86.48 94.26 565.09 97.86 128.71 111.21 100.54 32.57 34.01 103.79 102.05 89.38 64.02
5.77 6.77 9.09 8.43 4.88 3.47 4.68 6.16 7.32 7.36 8.23 8.87 4.41 6.49 3.9 80.95 3.66 4.09 3.61 3.74 0.74 15.94 3.56 7.3 7.79 9.89
4.61 3.01 7.42 11.84 9.01 5.16 5.6 6.94 3.18 5.41 8.15 12.55 6.13 32.64 4.93 184.75 11.8 8.54 6.11 8.89 131.73 6.94 38.26 33.45 44.63 33.24
1.96 0.78 1.5 2.61 2.79 2.01 2.12 2.92 0.98 0.97 0.92 0.7 1.7 42.15 5.97 71.97 3.42 9.23 3.24 1.63 0.33 0.75 0.11 0.96 6.97 4.82
87.86 116.22 88.64 62.12 33.31 31.73 60.0 92.03 107.45 118.02 113.72 101.35 82.3 95.45 77.71 625.52 58.6 70.28 65.74 72.32 21.13 36.98 95.73 63.78 63.55 59.93
6.25 4.6 6.84 6.43 8.5 8.67 10.04 10.57 8.92 11.04 12.15 14.74 5.65 26.71 14.37 109.55 11.06 14.77 16.95 12.19 8.13 3.23 15.52 14.73 13.3 12.93
17.66 15.83 19.55 23.48 28.29 31.54 27.36 25.28 22.96 23.38 21.74 18.01 16.52 13.08 9.94 110.56 14.06 18.5 19.04 22.28 4.29 12.34 12.5 13.38 23.64 19.66
2.26 3.29 8.18 9.59 8.83 12.12 23.17 21.77 26.08 28.75 27.79 21.83 3.07 182.17 67.02 554.4 41.21 53.61 21.7 28.13 4.7 16.47 6.5 10.29 34.79 24.39
0.35 0.43 0.95 1.73 2.1 1.82 2.64 1.95 3.35 3.96 3.81 3.2 0.77 2.24 2.94 150.3 1.47 3.27 1.74 1.1 0.78 2.75 5.97 4.02 3.45 3.05
0.36 1.64 1.51 2.88 4.44 4.29 4.51 3.02 5.98 5.45 6.01 5.65 0.56 1.95 3.95 186.93 0.75 4.32 3.8 2.47 1.15 9.03 7.14 5.77 10.85 4.75
1.67 3.62 4.62 7.07 7.29 11.49 10.48 9.08 14.24 13.9 13.49 12.97 4.51 7.48 8.75 402.92 5.01 8.96 8.6 3.81 1.35 3.21 10.6 8.9 9.43 6.85
29.25 28.58 47.18 59.83 68.56 58.08 56.02 40.37 49.09 72.64 79.01 101.46 40.83 110.28 62.3 221.73 76.36 55.84 63.93 108.94 2.85 64.92 11.29 96.42 63.27 135.38
0.26 0.37 0.71 0.2 0.31 0.16 0.57 0.21 0.28 0.31 0.19 0.66 0.06 0.57 0.8 4.2 0.08 0.92 0.89 2.34 0.1 0.53 0.64 1.28 0.53 0.96
0.0 0.02 0.0 0.0 0.0 0.03 0.03 0.0 0.0 0.21 0.13 0.05 0.0 0.0 0.19 0.28 0.2 0.09 0.03 0.03 0.07 0.05 0.38 0.33 0.13 0.29
0.84 0.0 0.05 0.15 0.22 0.19 0.36 0.37 0.38 1.45 2.65 1.75 0.75 0.41 1.46 3.65 2.05 0.15 0.2 0.23 2.01 0.97 4.62 5.97 2.79 2.97
2.04 0.07 0.11 0.24 0.43 0.81 0.79 0.83 1.22 3.66 4.95 4.51 2.21 1.1 4.51 8.67 4.42 0.32 0.38 0.34 2.31 1.5 6.99 8.05 4.79 6.1
0.18 0.02 0.02 0.12 0.1 0.17 0.18 0.12 0.2 0.49 0.62 0.49 0.08 0.43 0.28 3.51 0.14 0.06 0.0 0.05 0.15 0.02 0.21 0.17 0.12 0.35
0.12 0.05 0.02 0.04 0.09 0.0 0.03 0.11 0.07 0.21 0.36 0.23 0.12 0.4 0.18 3.57 0.35 0.0 0.1 0.03 0.12 0.02 0.19 0.22 0.08 0.18
25.98 35.78 30.98 28.28 25.39 22.21 25.98 30.95 33.46 29.51 30.14 29.22 26.72 32.91 27.02 188.05 26.05 35.31 24.73 21.26 16.98 18.9 35.8 20.1 36.82 21.55
0.0 0.04 0.0 0.05 0.0 0.0 0.04 0.04 0.04 0.0 0.02 0.0 0.0 0.0 0.16 1.88 0.0 0.04 0.0 0.06 0.96 0.1 0.45 0.0 0.11 0.22
0.74 0.74 0.74 0.7 0.7 0.87 0.56 0.47 0.83 1.76 1.81 1.97 0.56 1.0 4.66 12.25 1.94 3.29 1.78 2.3 2.77 0.91 5.53 8.04 2.0 3.84
3.55 0.34 0.97 3.22 11.53 23.99 34.68 29.58 42.96 63.67 50.27 34.87 6.81 5.35 9.34 201.5 18.56 30.59 25.79 31.12 4.17 4.59 44.76 43.07 19.31 17.02
0.97 4.37 17.55 24.6 28.22 33.73 28.6 26.25 29.31 24.25 18.45 13.76 1.68 14.81 28.5 271.04 21.81 36.46 28.52 31.77 1.64 16.55 22.56 15.88 20.31 17.87
0.0 0.08 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.22 149.16 0.14 0.0 0.04 0.17 0.0 0.0 0.0 0.0 0.0 0.0
0.14 0.08 0.07 0.02 0.02 0.04 0.0 0.03 0.0 0.11 0.11 0.12 0.11 0.04 0.26 156.77 0.26 0.09 0.08 0.24 0.04 0.0 0.08 0.02 0.01 0.0
0.02 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.04 32.01 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0
0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.02 0.0 0.07 0.0 4.56 0.02 0.03 0.0 0.06 0.02 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.02 0.04 20.52 0.0 0.0 0.04 0.0 0.02 0.0 0.0 0.0 0.0 0.0
0.02 0.05 0.02 0.0 0.02 0.0 0.0 0.05 0.04 0.1 0.06 0.02 0.03 0.16 0.08 45.63 0.0 0.04 0.08 0.04 0.02 0.03 0.15 0.28 0.14 0.27
15.78 14.8 16.66 15.29 15.63 14.79 14.43 18.37 14.47 12.99 12.92 12.85 23.45 10.74 11.21 73.6 8.73 16.12 13.44 9.76 75.46 26.02 41.22 36.17 20.59 23.41
0.28 0.47 0.34 0.49 0.61 0.43 0.72 0.45 0.75 0.75 0.63 0.42 0.32 1.75 1.15 433.64 0.87 0.97 0.94 0.65 0.29 10.67 2.05 2.93 2.28 1.82
23.76 18.45 16.89 27.49 32.22 26.66 24.65 28.89 36.4 26.51 28.55 21.74 18.97 42.62 34.13 94.12 15.1 35.07 37.79 12.99 62.2 48.93 36.1 31.94 31.78 35.33
12.48 9.02 11.2 13.26 12.29 10.87 12.84 14.38 12.72 14.58 17.31 17.69 15.14 14.26 24.18 86.11 10.78 12.61 10.22 9.19 7.26 14.51 16.51 13.84 20.15 16.47
1.16 0.51 0.55 0.59 1.25 3.49 5.79 3.85 1.69 1.56 1.88 1.26 1.34 20.61 0.49 114.84 3.13 1.1 1.1 0.56 1.49 0.39 1.22 0.45 1.24 0.8
0.58 0.98 1.07 1.83 2.44 3.04 3.8 3.76 1.49 2.08 1.54 1.61 0.7 0.31 0.38 113.18 0.89 1.98 2.16 3.56 0.0 0.18 0.46 0.55 2.02 1.1
0.09 0.12 0.07 0.09 0.05 0.0 0.05 0.11 0.2 0.17 0.28 0.09 0.12 0.54 0.29 2.6 0.08 0.13 0.09 0.07 0.05 0.04 0.1 0.0 0.2 0.15
23.31 20.07 20.59 23.77 13.77 12.24 12.07 20.45 5.57 8.95 9.41 10.11 18.44 7.29 11.3 1050.27 7.58 12.23 10.37 13.09 0.68 9.59 5.72 9.49 39.42 31.91
0.69 0.56 0.86 1.13 1.05 1.21 1.14 0.91 1.33 1.11 1.66 1.4 1.0 1.63 3.34 11.87 2.26 2.76 2.72 3.11 2.16 1.56 3.01 4.95 1.58 2.82
0.28 0.17 0.13 0.11 0.33 0.13 0.24 0.25 0.21 0.25 0.11 0.12 0.22 0.07 0.16 0.69 0.05 0.27 0.07 0.02 0.35 0.1 0.43 0.12 0.41 0.25
0.9 2.71 5.13 7.01 9.04 9.16 10.82 10.39 9.61 10.13 8.62 7.81 1.73 3.36 11.23 42.92 2.92 4.45 4.87 3.39 0.47 3.5 2.25 5.35 5.46 3.23
14.65 15.34 17.2 17.88 14.62 11.8 15.79 16.5 19.9 21.43 23.46 25.8 16.86 43.92 30.9 106.51 19.06 19.99 20.89 15.97 9.7 21.21 21.7 22.3 18.36 21.37
2.85 2.36 2.32 2.95 2.05 2.14 3.46 3.68 3.18 2.8 3.01 2.9 3.93 7.72 3.12 34.89 2.77 2.92 2.95 3.15 1.82 2.25 2.32 2.19 4.85 5.62
8.27 11.93 13.53 11.75 7.03 6.26 7.27 8.3 8.28 7.74 7.44 8.24 8.04 8.85 11.44 95.53 9.35 14.71 14.83 12.6 30.72 31.58 28.43 16.67 23.52 17.64
95.59 75.34 80.3 58.71 48.24 34.38 27.49 41.53 64.56 81.31 105.2 113.95 89.86 91.49 114.65 429.02 103.7 82.47 117.43 83.27 374.92 75.89 286.25 247.66 70.47 92.19
21.33 9.91 7.62 5.8 3.91 5.58 8.84 12.17 8.53 8.55 10.85 9.84 21.75 5.26 3.11 110.67 5.83 6.58 6.65 6.47 0.5 5.95 5.89 4.63 14.22 13.62
21.33 20.3 21.52 18.94 18.37 17.39 19.88 17.6 18.79 16.66 18.71 22.0 19.27 16.8 25.95 315.62 18.97 31.94 28.36 15.59 74.7 27.0 79.46 42.27 18.88 17.99
4.61 1.51 1.11 1.25 4.01 12.03 20.89 11.72 15.89 3.95 2.36 1.05 3.86 43.02 34.93 208.18 11.41 6.84 6.13 3.24 0.13 2.42 0.83 1.08 7.85 2.0
87.36 48.85 54.28 61.7 34.24 20.51 26.73 41.51 19.38 20.07 19.51 21.94 63.89 26.53 12.97 1371.88 28.97 28.13 23.57 25.86 1.28 17.26 10.18 7.3 72.82 51.96

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)