Heatmap: Cluster_8 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.69 -1.08 -2.27 -3.5 -2.91 -0.92 0.24 0.43 0.67 0.94 0.68 0.32 -0.58 0.7 -2.17 3.03 -0.67 -0.59 -0.98 0.01 -6.55 -5.79 -1.53 -1.74 -0.83 -1.62
-0.8 -0.04 0.2 0.33 0.21 -0.03 0.01 0.18 -0.08 0.06 -0.14 -0.05 -0.74 0.1 -0.4 1.87 -0.48 0.17 -0.47 -0.29 -0.52 -1.51 0.04 -0.77 0.07 -0.45
-1.82 -1.73 -1.67 -1.49 -0.87 -0.13 0.48 0.31 0.17 0.13 -0.36 -0.95 -1.92 -0.51 -1.09 3.46 -0.5 -0.36 -0.57 -0.27 -5.83 -2.57 -1.63 -1.7 -0.81 -1.64
-1.32 -0.14 0.38 0.04 -0.43 -0.47 -0.18 -0.13 -0.26 -0.22 -0.07 0.11 -1.97 -0.09 0.3 1.36 -0.13 0.2 0.11 0.01 -0.07 -1.14 0.38 0.34 -0.11 0.43
-0.39 -1.11 -1.11 -0.95 -1.92 -2.57 -2.22 -1.52 -2.7 -2.26 -1.8 -1.84 -0.37 1.45 -3.26 3.92 -1.38 -1.28 -2.04 -1.79 -4.47 -2.8 -2.15 -4.62 -0.21 -0.96
-10.75 -6.78 -6.45 -8.05 -9.16 -8.52 -7.25 -10.56 - -6.71 -6.65 -7.55 -10.02 -6.99 -4.82 4.69 -5.43 -6.13 -6.63 -5.03 -10.44 -10.7 - - - -9.95
-2.31 -0.72 0.21 0.25 -0.47 -0.75 -0.36 0.06 -0.6 -0.9 -1.1 -1.12 -3.38 -1.33 -0.4 3.42 -0.81 -0.22 -0.4 -0.67 -5.73 -2.59 -2.02 -1.41 0.04 -0.08
-0.02 -0.34 -0.81 -1.2 -1.36 -1.31 -1.07 -0.86 -0.97 -1.01 -0.99 -1.0 -0.45 -3.69 -2.29 3.92 -2.21 -1.1 -1.45 -1.34 -4.51 -1.78 -1.94 -1.56 -0.7 -1.95
-1.67 -1.36 -1.23 -1.05 -0.89 -0.36 -0.27 -0.35 0.09 -0.07 -0.2 -0.23 -1.72 1.36 0.05 2.99 -0.14 -0.26 -0.13 -0.38 -4.2 -0.98 -1.21 -1.47 -1.02 -0.83
-1.36 -1.17 -0.98 -0.87 -0.74 -0.69 0.06 -0.01 0.33 0.17 0.13 -0.26 -1.46 1.11 -0.3 2.83 -0.34 -0.4 -0.59 -0.57 -3.43 -0.71 -0.96 -0.88 -0.2 -0.8
-7.08 -7.6 -6.76 -3.81 -2.13 -1.25 -0.72 -1.13 -0.23 -0.59 -0.63 -1.05 - -0.2 -0.99 4.12 -1.79 -2.68 -2.86 -2.89 -4.3 -5.59 0.04 -1.47 -1.73 -1.81
-2.67 -2.6 -2.7 -2.79 -3.83 -4.59 -3.12 -3.01 -2.07 -2.3 -2.17 -2.62 -2.97 -1.37 -1.18 4.41 -1.78 -2.05 -2.1 -3.08 -3.94 -4.8 -1.83 -2.08 -1.81 -2.42
-9.26 -6.47 -6.34 -7.17 -7.96 -8.15 -7.54 -9.63 -9.65 -7.59 -8.25 -8.32 -8.37 -6.18 -4.59 4.69 -5.17 -6.19 -6.52 -4.84 -9.11 -5.27 -6.75 -10.8 -8.69 -8.25
-1.0 -0.41 0.21 0.29 -0.67 -1.55 -0.93 -0.72 -2.19 -1.58 -1.37 -0.89 -0.47 -1.29 -2.99 3.54 -2.12 -2.37 -2.3 -1.53 -3.38 1.07 -3.09 -1.83 0.12 0.33
- -5.28 -5.42 -5.34 - -5.41 - - - - -5.46 - - -4.78 -4.09 4.68 -5.45 -6.17 -4.63 -5.74 - -5.67 -6.08 - -4.45 -
-1.24 -1.38 -1.29 -1.53 -2.31 -3.02 -2.16 -1.63 -2.2 -1.52 -1.31 -1.11 -0.82 -2.05 -2.64 4.27 -1.79 -1.95 -2.31 -1.91 -5.27 -2.64 -3.74 -2.95 -1.77 -2.29
-3.9 -6.09 -8.48 -7.46 -5.94 -6.07 -5.5 -5.22 -5.23 -4.1 -3.18 -3.18 -3.53 0.73 -0.02 2.32 0.82 -0.37 -0.88 -0.65 1.08 0.33 1.81 1.67 1.06 0.95
-3.03 -4.87 -4.78 -4.33 -4.0 -4.29 -3.68 -4.07 -3.96 -3.33 -3.17 -3.15 -3.04 0.85 0.14 2.39 1.01 0.19 -0.31 -0.53 0.9 -0.05 1.52 1.42 0.85 1.01
-2.24 -1.47 -0.71 -0.39 0.14 0.21 0.55 0.52 0.14 0.17 0.07 -0.2 -1.85 -0.3 -0.62 2.71 0.69 -0.34 -0.58 -0.75 -5.29 -1.1 -0.51 -1.02 -0.79 -1.02
-4.81 -2.71 -1.26 -0.96 -0.97 -0.19 -0.55 -1.01 -1.46 -1.06 -1.46 -1.33 -4.14 1.61 -1.44 3.82 -1.18 -1.01 -0.99 -1.79 -6.95 -4.07 -3.48 -2.62 -1.39 -0.64
-1.93 - - - - - - - - - - - - - - 4.67 - - - -1.44 - - - - - -
- - - - - - - - - - - - - - -1.83 4.66 - - -2.1 - - - -2.12 - - -
- - - -2.3 -2.36 -1.01 -0.38 -2.37 -2.13 -0.75 - -2.15 - -0.64 - 4.04 -1.17 0.35 -0.43 -1.6 0.85 -1.65 -2.63 - -1.9 -0.68
-0.44 -0.08 0.03 0.03 0.04 0.09 0.2 0.14 0.33 0.34 0.16 0.11 -0.29 -0.34 -0.47 1.63 -0.47 0.03 -0.57 -0.05 -1.12 -0.37 -0.09 -0.5 -0.32 -0.46
-4.31 -2.34 -1.19 -0.75 -0.14 0.28 0.21 0.18 0.71 0.3 0.21 -0.1 -5.01 -0.7 0.0 2.61 -0.76 -0.59 -0.65 -0.93 -3.59 0.33 0.34 -0.43 0.07 -0.36
-5.2 -4.08 -3.02 -2.25 -1.21 -0.51 -0.54 -1.28 -1.4 -1.08 -1.75 -2.38 -4.54 -2.08 -2.24 4.29 -1.55 -2.09 -2.15 -1.6 -5.86 -4.89 -1.81 -2.83 -2.38 -2.76
0.04 -0.4 -1.05 -1.03 -0.67 -0.43 0.34 0.32 0.49 0.4 0.12 -0.2 -0.15 -0.4 -0.35 2.04 -0.28 0.44 -0.0 -0.37 -1.86 -1.23 -0.03 -0.0 -0.3 -0.57
0.31 -0.31 -1.41 -1.82 -1.17 -0.08 0.35 0.45 0.69 0.45 0.17 -0.24 0.09 -0.49 -0.37 2.22 -0.31 0.08 -0.13 -0.27 -1.9 -1.84 -0.23 -0.25 -0.44 -0.92
-0.66 -0.43 -0.0 -0.11 -0.9 -1.39 -0.96 -0.57 -0.32 -0.31 -0.15 -0.04 -1.05 -0.49 -1.22 3.15 -1.32 -1.16 -1.34 -1.28 -3.62 0.81 -1.36 -0.32 -0.23 0.12
-2.4 -3.02 -1.72 -1.04 -1.44 -2.24 -2.13 -1.81 -2.94 -2.17 -1.58 -0.96 -1.99 0.42 -2.31 2.92 -1.05 -1.52 -2.0 -1.46 2.43 -1.81 0.65 0.45 0.87 0.44
-1.77 -3.1 -2.16 -1.35 -1.26 -1.73 -1.66 -1.19 -2.77 -2.79 -2.86 -3.25 -1.97 2.66 -0.16 3.43 -0.96 0.47 -1.04 -2.03 -4.35 -3.16 -5.86 -2.8 0.06 -0.47
-0.13 0.27 -0.12 -0.63 -1.53 -1.6 -0.68 -0.06 0.16 0.29 0.24 0.08 -0.23 -0.01 -0.31 2.7 -0.72 -0.45 -0.55 -0.41 -2.19 -1.38 -0.01 -0.59 -0.6 -0.68
-1.25 -1.7 -1.13 -1.21 -0.81 -0.78 -0.57 -0.5 -0.74 -0.43 -0.3 -0.02 -1.4 0.84 -0.05 2.88 -0.43 -0.01 0.18 -0.29 -0.87 -2.21 0.06 -0.02 -0.17 -0.21
-0.35 -0.51 -0.2 0.06 0.33 0.49 0.28 0.17 0.03 0.06 -0.05 -0.32 -0.45 -0.78 -1.18 2.3 -0.68 -0.28 -0.24 -0.01 -2.39 -0.87 -0.85 -0.75 0.07 -0.19
-4.4 -3.86 -2.55 -2.32 -2.44 -1.98 -1.04 -1.13 -0.87 -0.73 -0.78 -1.13 -3.96 1.93 0.49 3.54 -0.21 0.17 -1.14 -0.76 -3.35 -1.54 -2.88 -2.21 -0.46 -0.97
-4.54 -4.25 -3.09 -2.22 -1.95 -2.15 -1.61 -2.05 -1.27 -1.03 -1.09 -1.34 -3.4 -1.85 -1.46 4.22 -2.46 -1.31 -2.22 -2.88 -3.37 -1.56 -0.44 -1.01 -1.23 -1.41
-4.94 -2.76 -2.88 -1.95 -1.33 -1.37 -1.3 -1.88 -0.9 -1.03 -0.89 -0.98 -4.32 -2.51 -1.49 4.07 -3.89 -1.36 -1.55 -2.17 -3.27 -0.3 -0.64 -0.95 -0.04 -1.23
-3.79 -2.67 -2.32 -1.71 -1.66 -1.01 -1.14 -1.35 -0.7 -0.73 -0.77 -0.83 -2.36 -1.63 -1.4 4.13 -2.2 -1.36 -1.42 -2.6 -4.1 -2.85 -1.12 -1.38 -1.29 -1.75
-1.25 -1.28 -0.56 -0.21 -0.02 -0.26 -0.31 -0.78 -0.5 0.07 0.19 0.55 -0.77 0.67 -0.16 1.68 0.14 -0.31 -0.12 0.65 -4.6 -0.1 -2.62 0.47 -0.13 0.96
-1.45 -0.93 0.03 -1.83 -1.16 -2.16 -0.3 -1.73 -1.32 -1.18 -1.89 -0.08 -3.51 -0.28 0.2 2.59 -3.18 0.4 0.35 1.75 -2.85 -0.39 -0.12 0.88 -0.39 0.46
- -2.01 - - - -1.9 -1.69 - - 1.09 0.42 -1.04 - - 0.94 1.51 1.04 -0.16 -1.5 -1.52 -0.54 -0.86 1.96 1.76 0.38 1.58
-0.75 - -4.89 -3.23 -2.65 -2.91 -1.97 -1.93 -1.88 0.04 0.91 0.32 -0.9 -1.77 0.05 1.37 0.54 -3.26 -2.81 -2.63 0.51 -0.54 1.71 2.08 0.99 1.08
-0.43 -5.23 -4.6 -3.54 -2.67 -1.77 -1.8 -1.73 -1.17 0.42 0.85 0.72 -0.31 -1.31 0.72 1.66 0.69 -3.1 -2.83 -3.03 -0.25 -0.88 1.35 1.55 0.8 1.15
-0.85 -4.28 -3.86 -1.46 -1.72 -0.87 -0.83 -1.46 -0.65 0.64 0.96 0.62 -1.97 0.42 -0.17 3.47 -1.19 -2.45 - -2.53 -1.08 -4.12 -0.61 -0.92 -1.43 0.12
-1.17 -2.44 -3.61 -2.59 -1.54 - -3.16 -1.25 -1.9 -0.34 0.43 -0.19 -1.16 0.6 -0.58 3.75 0.41 - -1.34 -2.96 -1.1 -3.86 -0.47 -0.26 -1.67 -0.6
-0.38 0.08 -0.13 -0.26 -0.41 -0.61 -0.38 -0.13 -0.02 -0.2 -0.17 -0.21 -0.34 -0.04 -0.32 2.47 -0.38 0.06 -0.45 -0.67 -1.0 -0.84 0.08 -0.75 0.12 -0.65
- -1.95 - -1.82 - - -1.89 -1.88 -1.88 - -2.93 - - - -0.0 3.53 - -1.92 - -1.49 2.56 -0.68 1.47 - -0.52 0.43
-1.71 -1.71 -1.71 -1.79 -1.79 -1.48 -2.1 -2.36 -1.55 -0.45 -0.41 -0.3 -2.11 -1.28 0.95 2.34 -0.32 0.45 -0.44 -0.07 0.2 -1.41 1.2 1.74 -0.27 0.67
-3.05 -6.44 -4.91 -3.19 -1.35 -0.29 0.24 0.01 0.55 1.12 0.78 0.25 -2.1 -2.45 -1.65 2.78 -0.66 0.06 -0.18 0.09 -2.81 -2.67 0.61 0.56 -0.6 -0.78
-4.95 -2.78 -0.77 -0.29 -0.09 0.17 -0.07 -0.19 -0.03 -0.31 -0.7 -1.12 -4.16 -1.02 -0.07 3.18 -0.46 0.28 -0.07 0.08 -4.19 -0.86 -0.41 -0.92 -0.56 -0.75
- -6.14 -8.04 - - - - - - - - - - -6.7 -4.72 4.69 -5.37 - -7.05 -5.07 - - - - - -
-5.43 -6.23 -6.46 -8.05 -7.94 -7.22 - -7.91 - -5.85 -5.84 -5.71 -5.73 -7.17 -4.58 4.68 -4.56 -6.12 -6.3 -4.67 -7.11 - -6.23 -8.23 -8.8 -
-6.13 -6.24 - - - - - - - - - -5.73 - - -4.92 4.69 - - - - -5.18 - - - - -
- -2.95 - - - - - - -3.1 - - -3.0 - -1.35 - 4.62 -3.12 -2.65 - -1.68 -3.08 - - - - -
- - - - - - - - - -4.25 - - - -5.35 -4.28 4.69 - - -4.26 - -5.17 - - - - -
-6.69 -5.22 -6.38 - -6.68 - - -5.32 -5.39 -4.14 -4.84 -6.27 -5.99 -3.48 -4.51 4.65 - -5.49 -4.42 -5.61 -6.34 -5.71 -3.59 -2.7 -3.71 -2.73
-0.47 -0.56 -0.39 -0.52 -0.49 -0.56 -0.6 -0.25 -0.6 -0.75 -0.76 -0.77 0.1 -1.03 -0.97 1.75 -1.32 -0.44 -0.7 -1.16 1.79 0.25 0.91 0.73 -0.09 0.1
-6.0 -5.27 -5.74 -5.19 -4.88 -5.39 -4.65 -5.3 -4.57 -4.59 -4.83 -5.42 -5.81 -3.36 -3.96 4.59 -4.37 -4.22 -4.26 -4.78 -5.93 -0.75 -3.13 -2.61 -2.97 -3.3
-0.46 -0.82 -0.95 -0.25 -0.02 -0.29 -0.41 -0.18 0.16 -0.3 -0.19 -0.59 -0.78 0.38 0.06 1.53 -1.11 0.1 0.21 -1.33 0.93 0.58 0.14 -0.03 -0.04 0.11
-0.41 -0.87 -0.56 -0.32 -0.43 -0.61 -0.36 -0.2 -0.38 -0.18 0.07 0.1 -0.13 -0.21 0.55 2.38 -0.62 -0.39 -0.69 -0.85 -1.19 -0.19 -0.0 -0.26 0.29 -0.01
-2.52 -3.69 -3.6 -3.49 -2.4 -0.93 -0.19 -0.78 -1.97 -2.09 -1.82 -2.39 -2.3 1.64 -3.75 4.11 -1.08 -2.59 -2.59 -3.56 -2.15 -4.07 -2.44 -3.88 -2.42 -3.05
-3.32 -2.58 -2.45 -1.68 -1.26 -0.94 -0.62 -0.63 -1.97 -1.48 -1.92 -1.86 -3.07 -4.26 -3.93 4.28 -2.72 -1.56 -1.43 -0.71 - -4.98 -3.68 -3.42 -1.53 -2.4
-1.23 -0.84 -1.76 -1.27 -2.29 - -2.24 -1.01 -0.14 -0.42 0.33 -1.25 -0.92 1.27 0.4 3.55 -1.55 -0.79 -1.3 -1.64 -2.03 -2.6 -1.11 - -0.18 -0.53
-1.22 -1.43 -1.4 -1.19 -1.98 -2.15 -2.17 -1.4 -3.28 -2.6 -2.52 -2.42 -1.55 -2.89 -2.26 4.28 -2.84 -2.15 -2.38 -2.05 -6.32 -2.5 -3.24 -2.51 -0.46 -0.76
-1.69 -1.98 -1.37 -0.98 -1.08 -0.88 -0.96 -1.29 -0.74 -1.0 -0.42 -0.67 -1.15 -0.45 0.59 2.42 0.02 0.31 0.29 0.48 -0.04 -0.51 0.44 1.16 -0.5 0.34
0.38 -0.35 -0.66 -0.9 0.65 -0.66 0.18 0.21 -0.05 0.21 -1.01 -0.86 0.03 -1.64 -0.39 1.69 -2.17 0.33 -1.54 -3.66 0.7 -1.04 1.02 -0.77 0.94 0.26
-2.99 -1.4 -0.48 -0.03 0.33 0.35 0.59 0.53 0.42 0.5 0.26 0.12 -2.05 -1.09 0.65 2.58 -1.3 -0.69 -0.56 -1.08 -3.94 -1.03 -1.67 -0.42 -0.39 -1.15
-0.66 -0.6 -0.43 -0.38 -0.67 -0.97 -0.56 -0.49 -0.22 -0.11 0.02 0.15 -0.46 0.92 0.41 2.2 -0.28 -0.21 -0.15 -0.54 -1.26 -0.13 -0.1 -0.06 -0.34 -0.12
-0.63 -0.89 -0.92 -0.57 -1.1 -1.03 -0.34 -0.25 -0.47 -0.65 -0.54 -0.6 -0.16 0.81 -0.49 2.99 -0.66 -0.59 -0.57 -0.48 -1.27 -0.97 -0.92 -1.01 0.14 0.35
-1.0 -0.47 -0.29 -0.49 -1.23 -1.4 -1.19 -0.99 -1.0 -1.09 -1.15 -1.01 -1.04 -0.9 -0.53 2.53 -0.82 -0.17 -0.16 -0.39 0.89 0.93 0.78 0.01 0.51 0.09
-0.31 -0.66 -0.56 -1.02 -1.3 -1.79 -2.11 -1.52 -0.88 -0.55 -0.17 -0.06 -0.4 -0.38 -0.05 1.85 -0.19 -0.53 -0.02 -0.51 1.66 -0.65 1.27 1.06 -0.75 -0.36
0.78 -0.33 -0.71 -1.1 -1.67 -1.16 -0.5 -0.03 -0.55 -0.54 -0.2 -0.34 0.8 -1.24 -2.0 3.15 -1.1 -0.92 -0.91 -0.95 -4.63 -1.07 -1.08 -1.43 0.19 0.13
-0.8 -0.87 -0.79 -0.97 -1.01 -1.09 -0.9 -1.08 -0.98 -1.15 -0.99 -0.75 -0.94 -1.14 -0.52 3.09 -0.97 -0.22 -0.39 -1.25 1.01 -0.46 1.1 0.19 -0.97 -1.04
-1.78 -3.39 -3.84 -3.67 -1.98 -0.4 0.4 -0.44 0.0 -2.01 -2.75 -3.92 -2.04 1.44 1.14 3.71 -0.47 -1.21 -1.37 -2.29 -6.96 -2.71 -4.25 -3.88 -1.01 -2.99
0.05 -0.79 -0.64 -0.45 -1.3 -2.04 -1.66 -1.03 -2.13 -2.08 -2.12 -1.95 -0.4 -1.67 -2.71 4.02 -1.55 -1.59 -1.84 -1.71 -6.04 -2.29 -3.05 -3.53 -0.22 -0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.