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Heatmap: Cluster_109 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.47 - - - - -0.82 -0.72 - - - - -0.35 - 1.44 - 1.7 0.26 - 1.72 - 3.48 - -1.32 0.41
0.41 - - 1.14 -0.97 - - 0.8 0.11 - 0.06 0.8 0.99 -1.46 - - - - - -1.2 0.72 - 2.63 2.22 -0.55 -1.45
- - - - - - - - - - - - - - - - - - - - 2.66 - 4.3 - - -
- - - - - 2.95 - - - - - - - - - - - - - - - - 4.19 - - -
0.77 -1.79 - -0.53 -0.13 -0.6 0.5 0.34 1.71 0.3 0.6 1.49 -0.76 - -0.33 -0.09 - -2.68 - - - -0.48 2.02 -0.0 -0.25 0.19
0.37 -0.43 -1.36 -1.79 -1.5 -1.08 -0.44 -1.18 -0.48 0.82 0.51 0.41 -0.88 -0.3 -0.67 -1.04 -0.62 0.47 -0.32 -0.62 -0.06 -2.58 2.7 0.65 -1.38 -0.94
- - - - - - - - - - - - - - -1.32 - - -1.66 0.5 - 1.84 1.17 3.17 0.53 -0.12 2.73
- - - - - - - - 0.61 - 0.58 - - - - - - 0.03 - - 1.43 0.36 3.35 - 1.0 2.53
- - - - - 3.0 - - - - - - - - - - - - - - 2.54 - 3.61 - - -
-2.24 -3.09 -4.03 -4.18 -0.75 -0.93 -1.29 -1.49 0.46 -1.19 -2.28 -4.17 -4.36 -2.2 -2.06 -4.37 -2.44 -0.55 -0.36 0.4 0.51 -2.62 3.45 -1.25 1.09 1.61
- - - 0.96 - - - - - - - - - 0.71 - 0.77 - 0.29 0.52 0.56 1.44 - 2.82 0.78 0.26 1.96
-0.29 - - - -0.09 - - -0.1 - -0.1 -0.02 - - - - - - -0.58 -0.34 - 0.83 - 4.0 0.62 -0.66 -
- - - -1.17 - - -1.04 - - -1.36 -0.32 - - - - -1.27 -1.28 -0.81 - - 3.04 0.04 2.73 0.94 1.45 0.98
-4.24 - -5.52 - - - - - -5.47 -5.63 - -5.43 - -1.16 0.75 0.19 -0.93 1.16 0.69 0.17 1.69 -0.59 3.02 1.6 -0.12 0.17
0.11 -1.08 -2.04 -0.49 -0.34 -1.01 -1.06 -1.06 0.25 0.5 1.09 0.84 -0.14 -1.43 -1.24 -1.76 -1.92 -0.28 -1.01 -1.05 0.73 -2.15 1.92 1.66 -0.13 -0.1
-0.58 -1.31 -0.46 -0.54 -1.4 -0.27 -0.09 -0.57 -0.18 - 0.1 -0.09 -2.31 -0.7 -0.76 -0.72 -0.98 0.38 0.65 -0.79 1.85 -0.16 1.47 0.61 0.73 0.45
- - - - - - - - - - - - - - - - - - - - - - - - - -
0.23 -0.31 -0.99 -0.76 -0.26 -0.2 -0.2 -0.1 0.28 -0.25 -0.26 -0.33 -0.1 -0.24 -0.67 -0.36 -0.69 -0.07 0.04 -0.7 -0.66 -1.23 2.0 0.57 0.84 -0.03
- - -3.06 - - -3.16 -2.61 - - -2.16 - -2.97 - - - -3.08 - - -2.23 - 2.19 -1.72 3.85 1.57 -3.73 1.37
-4.35 - -6.2 -2.46 -2.62 -4.37 -3.44 -3.87 -3.63 -2.83 -2.23 -4.1 - - - -4.66 -4.97 -2.37 -6.55 - 3.52 1.1 2.18 1.36 1.5 0.12
-1.36 -2.36 -4.14 -2.78 -4.22 -1.47 0.32 0.25 0.54 0.05 0.78 0.75 -1.14 0.07 0.85 0.09 0.31 -2.07 -2.1 -1.09 -1.99 -1.81 2.75 -0.08 0.03 -0.52
-0.8 -1.33 - - - -2.03 0.46 0.59 -0.69 1.1 1.01 0.41 -1.38 -0.47 0.33 -0.28 0.06 -0.88 - -1.66 -3.22 -1.53 2.95 -1.67 0.42 -0.19
-0.73 -1.47 -2.51 -3.58 -3.34 -1.54 0.31 0.49 0.64 1.18 1.04 0.76 -0.56 0.33 0.61 -0.35 0.21 -2.31 -0.94 -1.55 -2.62 -1.85 2.17 0.11 -0.26 -0.33
-0.36 -1.98 -1.21 -2.81 -3.14 -1.23 0.23 -1.61 -0.85 -1.26 -2.53 -2.76 -1.99 -1.96 -0.78 -0.24 -1.97 -0.67 0.14 -1.03 1.48 0.29 2.85 0.12 1.39 0.74
- - - - - - - - - - - - - - - 0.68 - - - - 2.72 - 3.66 1.81 -0.98 0.27
-3.6 - - - -4.55 - -4.44 -4.43 -4.46 -3.52 -2.49 - - -1.08 1.45 0.57 -2.01 0.3 -0.57 -0.65 1.5 0.22 3.11 1.44 -0.05 0.73
-0.08 - - - 1.12 - - -0.05 - - 0.86 1.03 - - - - - -0.22 - 1.14 0.26 - 3.56 - -0.68 0.43
- -0.06 - - - - - 0.63 - 0.48 -0.28 0.18 -0.82 - - - - - - 0.72 0.9 - 4.01 - - -
-1.22 -2.08 -1.14 -1.44 -1.01 -1.43 -0.91 -0.65 -1.06 -0.22 -0.32 -0.04 -1.61 -0.85 -0.14 0.42 0.75 -1.42 -0.56 -0.58 -0.31 -2.27 2.8 1.3 -0.65 0.8
- - - - - - - - - - - - - - - - - - - 1.85 1.18 - 3.38 - - 3.28
- -0.18 - - -0.42 - - - - - 1.23 - - - -0.57 - 0.97 - - 1.36 -0.28 1.19 3.01 1.58 -0.93 1.1
0.34 0.03 -1.09 -0.89 -3.27 -1.63 -0.64 -1.34 -2.92 0.53 -0.66 1.52 0.28 -0.6 -0.5 - - -1.23 -1.04 -2.02 0.81 -1.51 3.19 -0.73 - -0.82
-1.15 -1.37 -1.91 0.43 0.29 -1.29 -1.36 -0.77 -0.84 -0.78 -0.21 -1.38 -3.27 -3.78 -4.1 -2.36 -3.2 -0.96 -1.89 -3.24 2.5 2.09 1.45 0.46 1.2 -0.37
-1.05 -1.16 -0.51 - - 0.27 - - 0.28 - -0.78 0.94 - - 0.17 - - 0.2 -1.09 -0.83 1.19 - 3.06 1.55 -1.36 1.14
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
-0.72 -1.14 -0.77 -0.32 -1.07 -0.66 -1.24 -0.66 -0.47 0.92 0.92 0.32 -0.33 0.64 -1.25 0.31 -1.0 -0.65 -0.13 -1.4 0.92 -0.93 2.06 -0.51 0.01 -0.16
- 0.23 - -0.83 -1.2 - -0.46 - -0.92 - - - - - - -0.93 -0.71 1.28 0.05 1.12 1.92 - 3.04 0.7 -0.52 0.53
- 1.11 - - 0.62 - - - - -0.2 -0.15 - - 0.27 - - - - - - 2.42 - 3.58 0.52 -0.76 -
- - - - - - - - - - - - - - - 3.09 - - - - 2.5 - 3.57 - - -
- - - - - - 0.62 0.64 - - - 0.71 - - - - 1.59 - - - 3.44 0.22 2.4 - -0.0 -
- - - 1.21 - - - - - - - - - - - - - - - - 0.81 0.86 3.96 - 2.19 -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.37 - - -0.36 - 0.51 - - 0.64 - 0.02 - - - - 0.81 0.27 0.3 -1.36 -0.77 3.67 - 0.54 0.09
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-2.56 -3.63 - -2.11 -4.58 -3.02 -4.76 -3.88 -3.75 -2.14 -1.66 -4.67 -4.87 -4.35 - - -2.6 -1.22 -1.46 -2.14 2.83 1.92 2.82 1.62 1.11 -3.17
- - - - - - - - - - - - - - 2.0 - - - - - 3.24 - 3.65 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.