Heatmap: Cluster_70 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
- -0.1 -1.27 2.03 -0.21 - -0.5 -0.1 0.76 1.09 -1.28 - -1.05 0.86 -1.34 1.34 - -1.43 0.91 -1.52
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
-0.7 1.43 - 3.55 1.35 - -0.49 - - - - -1.54 - - - - - - -1.51 0.01
- - - 3.4 - - -0.75 -1.59 -0.51 - 0.08 - 0.3 - -0.08 1.61 0.22 - -1.37 -
- - - 4.28 - - - -0.97 - - - - - - - - - - - -
- - - - - - - - - - 3.58 - - - - - - - 3.01 -
- - - - - - - 0.61 - - - - 2.36 - - - - - 3.74 -
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - 0.56 - - - - - - - - - - 4.21 -
- - - - - - - - - 2.78 - - 2.25 - - - - - 3.07 -
-1.59 -3.19 -2.69 -1.36 -0.17 -0.28 -0.84 0.25 -1.12 -0.75 1.2 -1.25 0.13 0.05 1.07 -0.32 -0.16 -0.02 0.72 1.69
-2.29 -3.73 -3.27 -2.75 -0.58 -0.68 -0.48 -0.07 -1.99 -1.66 1.41 -2.44 0.19 -0.12 1.32 -1.39 -1.08 -0.24 2.09 1.37
-5.81 -5.65 -4.58 1.64 -2.77 -6.16 -1.44 -2.15 -3.48 -4.99 -2.84 -4.29 -4.53 -4.62 -3.41 -2.02 -3.89 -4.13 3.91 -2.83
-0.67 -0.33 -2.56 -0.01 -1.22 -3.1 -1.73 -1.07 0.35 1.25 0.16 -3.4 -0.31 -0.4 0.72 0.75 0.57 -2.21 1.92 -0.26
-2.63 -3.6 -2.71 -1.57 -1.28 -1.53 -0.67 0.15 -2.46 -2.21 1.87 -2.18 -0.13 -0.31 1.61 0.82 -1.69 -1.02 1.89 0.55
-3.75 -3.48 -4.18 -2.52 -1.17 -1.29 -0.77 -0.72 -3.02 -2.83 1.68 -3.18 0.11 -0.13 1.48 0.43 -1.49 -0.95 2.31 1.02
- - - - - -7.58 -8.53 0.06 0.36 0.64 -0.01 0.42 0.1 0.89 -0.7 0.86 2.42 -8.08 1.47 -1.73
-0.68 - -0.82 2.57 - - -0.5 -0.48 -1.5 - -1.82 -3.84 - -3.22 -1.78 0.1 -0.84 -0.96 2.87 -0.19
-1.28 -4.73 -5.75 -0.77 -1.49 -1.46 -0.01 -0.07 0.54 1.3 1.34 0.13 -0.79 -0.58 1.1 -3.47 0.5 -1.94 1.0 0.67
0.27 - - - 1.89 - - -0.12 - - 2.08 -1.77 - -1.17 1.97 1.38 - - 1.42 -
-6.52 -7.12 -6.78 -0.95 -6.63 - -5.4 -1.09 -2.22 -1.64 -3.02 -7.47 -6.05 -4.93 -3.56 -5.15 -4.03 -6.34 4.16 -2.72
-1.59 -3.19 -2.69 -1.36 -0.17 -0.28 -0.84 0.25 -1.12 -0.75 1.2 -1.25 0.13 0.05 1.07 -0.32 -0.16 -0.02 0.72 1.69
-1.98 -3.76 -3.45 -2.02 -0.61 -0.79 -0.47 -0.06 -2.16 -1.82 1.74 -2.5 0.07 -0.16 1.76 -0.8 -0.85 -0.3 1.37 1.34
0.18 -1.65 - 0.22 -0.7 - -0.91 -0.22 -1.04 -1.4 -0.69 -3.46 0.45 0.06 -1.12 0.24 -2.72 -0.14 3.04 -1.14
-1.59 -0.79 -0.94 -2.12 0.21 -0.06 -2.93 0.61 -2.26 -1.86 -4.2 -1.41 -2.4 -2.44 -4.74 1.51 0.25 -0.08 1.99 2.1
-1.98 -3.76 -3.45 -2.02 -0.61 -0.79 -0.47 -0.06 -2.16 -1.82 1.74 -2.5 0.07 -0.16 1.76 -0.8 -0.85 -0.3 1.37 1.34
-0.16 - -0.51 - - -14.18 0.36 -0.12 -0.57 0.95 1.39 - - - - -0.22 -0.39 -0.55 2.88 0.41
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
- 3.32 - - - - - -1.23 - - - - - - 0.97 2.45 - - 1.13 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - 1.73 - - - - - - - - - - 4.06 -
0.5 - - - - - - -1.02 -0.45 - - - - - 1.23 - - 1.43 3.32 1.21
- - - 4.17 - - - - - - - - - 0.97 - - - - - -
-1.86 -3.42 -3.25 0.63 -1.06 -1.85 -2.2 -0.62 -2.36 -2.14 -0.69 -3.18 -2.2 -2.47 -0.61 -1.8 -1.08 -1.4 3.6 -0.16
- - - - - - - - - - - - - - - - - - 4.32 -
-0.12 -3.92 -3.0 1.3 -1.61 -2.83 -2.34 -0.92 -3.76 -4.18 -0.32 -4.21 -3.05 -3.45 -0.56 -1.62 -1.71 -2.53 3.61 -1.65
1.51 0.67 2.08 0.65 -0.6 -1.52 -4.86 -0.38 -1.06 -1.39 -1.96 -1.52 -0.06 -0.26 -1.35 -3.68 -0.45 -0.84 1.47 -2.5
- - - - 1.95 - - 0.97 1.26 - 0.28 -0.92 - - - - - - 3.33 -
-2.47 -3.95 -3.46 -1.8 -1.47 -1.69 -1.12 -0.44 -3.04 -2.58 2.07 -2.99 0.04 -0.05 1.94 -0.72 -1.55 -1.18 2.12 0.41
-1.54 -5.61 -5.36 -2.9 -1.65 -1.75 -0.12 0.1 0.3 0.97 1.9 -0.74 -0.36 -0.53 1.75 -2.69 0.26 -1.92 0.33 0.73
0.96 - - - - - - 0.58 1.95 3.19 - - - - 1.85 - - - - -
- - - - - - - 2.11 - - - - - - - - - - 3.97 -
- - - 3.97 - - - - - - - - - - - 2.1 - - - -
-0.51 -1.93 - -0.39 - -2.89 -2.82 -0.51 -0.17 0.73 -0.05 -2.68 0.43 -0.15 -0.33 0.39 -0.17 -1.69 2.87 -0.4
3.12 - - - - - 1.0 - - - - - - - - - - - 3.22 -
-1.64 -0.49 -1.51 - -0.56 - -2.5 0.31 1.39 1.23 -0.71 - 0.49 0.79 1.18 -1.36 -1.54 -0.76 1.28 0.84
-2.75 -3.02 -2.24 0.53 -1.06 -2.76 -3.25 -0.56 -2.77 -2.13 -0.15 -3.45 -2.33 -2.6 -0.24 -0.59 -1.43 -1.75 3.59 -0.52
-2.38 -4.96 -4.87 -1.9 -1.36 -1.56 -1.32 0.08 -3.05 -2.67 2.3 -2.83 0.42 0.21 2.19 -1.76 -1.73 -1.08 1.2 0.63
3.07 - - - - - - - - - - - - - - - - - 3.54 -
1.67 - - - - - 0.99 -1.89 0.74 - - - - 0.21 - - - 1.42 2.63 1.52
-2.36 -5.09 -4.22 -4.83 -0.8 -0.86 -1.53 -0.1 -2.78 -2.45 2.09 -2.9 0.97 0.61 2.13 -1.58 -1.14 -0.47 -0.18 1.21
-1.98 -3.76 -3.45 -2.02 -0.61 -0.79 -0.47 -0.06 -2.16 -1.82 1.74 -2.5 0.07 -0.16 1.76 -0.8 -0.85 -0.3 1.37 1.34
-5.0 -1.0 -4.62 2.2 - 1.34 -1.03 -0.14 0.34 -0.51 - -4.15 -1.5 -4.12 - -0.36 0.26 - 2.16 1.02
0.66 1.22 - - - 0.39 0.95 -0.7 -0.64 0.83 - - - 0.6 -0.17 0.75 - 1.56 1.48 -
- - - - - - - - - - - - - - - - - - 4.32 -
0.05 - -1.74 0.63 -1.73 - -1.54 -1.2 -0.7 -0.46 - -6.4 -0.43 0.16 -0.07 -0.6 -1.08 - 3.32 -0.38
- - - - - - - 0.55 - - - - - - - - - - 4.21 -
-0.16 -2.31 -2.14 -2.28 -0.81 1.55 -2.63 -0.07 -0.45 -0.84 -1.28 -0.88 -0.88 -0.03 -0.32 -0.82 -0.45 1.79 1.14 1.21
- - - - - - - - - - - - - - - - - - 4.32 -
-2.02 -3.53 -2.81 -3.07 0.34 -0.43 -3.27 -0.1 -3.29 -2.97 0.12 -2.14 -1.23 -1.08 0.11 0.82 -0.05 0.83 2.62 1.13
- - - - - - - - - - - - - - - - - - 4.32 -
- 2.13 - 2.67 - - 1.78 -1.02 0.38 0.16 - - - - - - - - 1.52 -
- - - - - - - - - - - - - - - - - - 4.32 -
- 1.14 -0.02 - - - 1.17 -0.87 -0.25 -0.83 - - 2.94 0.1 - - - - 1.6 -0.28
-1.29 - - 0.36 - -1.01 1.26 0.72 -0.26 -0.54 0.16 -1.73 0.64 -1.24 0.81 0.35 -0.03 -1.51 1.47 0.78
- 0.87 0.8 2.56 - - - 0.36 -0.76 -1.04 -0.17 - - -1.41 0.14 - 0.05 - 2.25 -
- - - - - - - -2.79 - - - - - - - - - - 3.81 2.55
-5.59 - - - -2.18 -2.4 -3.03 -0.27 -0.34 -0.05 -0.15 -1.14 -1.36 -0.36 0.31 -1.44 0.79 -1.18 2.95 1.51
- - - - - - - -0.39 - - - - - - - - - - 4.27 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
-0.57 1.54 - 2.08 0.42 - - -0.9 -1.32 0.15 -0.65 - 0.35 -2.02 0.15 0.66 0.87 - 0.69 -0.88
-2.23 -1.52 -0.91 -2.74 -1.63 -1.68 -5.08 0.36 -2.83 -2.59 2.06 -2.15 0.88 0.74 2.07 0.47 -2.1 -1.24 0.23 0.22
- - - - - - - - 3.18 - - - - - - - - - 3.45 -
- - - - - - - - - - - - - - - - - - 4.32 -
-1.51 -2.56 -2.07 0.33 -0.5 -1.57 -1.56 -0.59 -2.79 -2.68 -0.79 -3.39 -1.64 -1.86 -0.93 -1.57 -0.74 -0.69 3.5 -0.07
1.06 - - - - - - -0.81 2.72 2.76 - - - - - - - - 1.99 -
- - - 4.31 - - - -2.38 - - - - - - - - - - - -
-1.59 -0.79 -0.94 -2.12 0.21 -0.06 -2.93 0.61 -2.26 -1.86 -4.2 -1.41 -2.4 -2.44 -4.74 1.51 0.25 -0.08 1.99 2.1
-2.24 -4.53 -4.27 -3.01 -1.16 -1.27 -1.05 0.12 -2.79 -2.47 2.27 -2.61 0.5 0.31 2.04 -1.82 -1.45 -0.87 1.21 0.64
-1.61 -4.35 -3.48 -1.49 -1.68 -1.76 0.21 0.11 0.6 1.11 1.31 -0.44 -1.06 -0.9 0.91 -3.49 0.13 -1.35 1.68 0.8
- - - - - - - - - - - - - - - - - - 4.32 -
- - 2.86 - - - 2.1 -2.45 - - 2.62 - - - - - - - 1.1 -
-5.35 -5.34 -6.97 -2.02 0.19 -1.56 -5.17 -0.26 0.39 0.84 0.98 0.91 0.29 0.9 1.02 -3.43 -2.82 0.59 1.35 0.01
-0.92 -1.71 -1.23 -0.59 -0.32 -0.93 -1.22 0.14 -2.35 -2.13 1.33 -2.6 -0.27 -0.47 1.29 -0.12 -0.38 -0.25 2.02 0.61
-1.92 -3.23 -2.89 -0.88 -0.68 -0.86 -0.25 0.12 -2.53 -2.26 1.16 -3.1 0.51 0.25 1.46 -0.98 -1.31 -0.35 1.9 1.22
- - - - - - - 4.32 - - - - - - - - - - - -
-2.05 -3.65 -3.1 -1.97 -0.85 -0.98 -0.55 -0.1 -2.53 -2.13 1.6 -2.47 0.17 0.07 1.55 -0.61 -1.04 -0.51 1.99 1.07
- - - - - - - - - - - - - - - - - - 4.32 -
-5.21 -6.25 -5.19 0.05 -2.48 -4.21 -4.6 -1.35 -1.78 -1.72 1.01 -5.31 -2.86 -3.42 0.7 -3.32 -3.67 -3.5 3.72 -1.96
-4.76 -4.59 -3.72 -1.1 -4.16 -5.59 -6.09 -2.28 -4.71 -5.23 -3.04 -5.34 -6.68 -7.47 -3.67 -3.22 -3.63 -5.61 4.2 -2.58
-0.98 -0.18 -1.35 - - - -0.98 -0.09 0.2 0.03 -0.37 0.6 -1.66 -2.83 0.92 2.17 0.97 -0.42 0.76 0.09
- - - 4.31 - - - -2.45 - - - - - - - - - - - -
- - - - - - - -0.98 - - - - - - - - - - 4.28 -
-0.26 -3.35 -3.31 0.48 -1.33 -2.29 -2.43 -1.53 -2.51 -3.01 -0.8 -2.32 -2.87 -3.13 -1.02 -0.76 -1.0 -2.24 3.69 -1.19
- - - - - - - - - - - - - - - - - - 4.32 -
- - - - - - - 0.34 - 3.13 - - - - - - - - 3.32 -
- - - 4.32 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.32 -
1.05 - - 2.92 - 1.21 - -1.76 - - - - - - - - - - 2.95 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.