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Heatmap: Cluster_237 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
1.54 0.39 0.97 0.64 0.44 -0.93 -0.58 -0.65 -0.8 -0.84 -0.83 -1.1 -0.56 -0.6 -0.69 -0.53 -0.19 0.46 0.04 -0.04
2.04 0.99 1.31 0.82 0.94 -0.42 -0.35 -0.71 -2.76 -3.52 -2.13 -2.4 -3.19 -2.28 -1.6 -1.05 -1.01 0.34 0.69 -1.18
3.05 - - 0.69 - - 1.57 -1.15 -2.86 -0.82 0.96 -1.89 - - -1.24 -0.32 - -1.06 -0.28 0.31
2.01 0.47 1.22 0.86 1.74 0.25 -1.24 -1.55 -2.37 -3.34 -2.17 -1.3 -1.2 -1.6 -2.13 -0.43 -2.01 -0.63 -2.95 0.57
2.58 0.14 1.62 2.02 -0.05 -1.11 -0.31 -5.08 -8.02 - -4.55 - - - - - - -3.32 1.03 0.42
3.1 0.9 1.5 1.13 0.5 -2.21 -1.43 -3.34 -5.29 -2.74 -7.8 -4.28 -6.62 -5.73 - -4.34 -2.58 0.29 -3.62 -0.54
2.51 -1.19 -1.46 -2.96 -2.79 -0.98 1.54 -0.27 -0.9 -0.93 -0.63 0.07 -0.2 -0.58 -1.88 -3.78 -1.65 0.32 -5.11 1.46
3.05 -1.11 -0.68 1.68 -0.16 -0.9 -3.01 -1.9 -7.69 -7.35 -7.91 -6.27 -8.38 -5.63 -5.76 -4.34 -5.22 -0.05 -0.31 1.88
0.77 2.19 2.46 0.9 -0.61 -2.65 -3.94 -2.11 -2.78 -2.37 -1.73 -4.23 -3.97 -5.3 -1.11 -3.73 -2.11 -1.07 -3.54 1.66
2.96 0.14 1.04 0.71 0.81 -0.3 - -1.35 -3.18 -3.32 - 0.81 -4.21 -2.15 -2.56 - -3.91 0.26 -0.99 -1.86
1.5 2.8 1.0 1.86 1.07 0.1 -7.12 -2.25 - - - - - - -7.49 - - 0.25 -8.91 -7.56
3.29 -1.09 1.77 -2.12 -2.66 -2.96 -4.12 -2.36 -2.96 -1.15 -5.76 1.83 - -5.22 -5.13 -2.87 -3.52 -2.71 -0.23 -3.12
3.01 1.91 1.94 0.33 0.67 -2.8 -1.96 -4.99 -8.2 - - - - - -6.73 - - -1.07 -6.93 -0.84
2.22 -0.41 1.05 0.99 1.49 -1.09 0.46 -1.17 -1.85 -3.26 -2.74 -3.17 -5.2 - -1.65 -2.74 -2.43 0.47 -0.45 0.99
2.62 1.78 1.81 1.19 1.0 -2.3 0.23 -3.53 -4.94 -4.55 -7.97 -2.53 -6.89 -5.39 -9.69 -2.73 -4.26 -2.95 -5.89 -0.94
1.36 2.11 2.89 1.5 0.82 -2.02 -7.28 -2.66 - - - -7.04 - - - -4.97 -5.17 -1.53 -3.97 -2.36
2.42 0.74 -0.62 1.8 0.31 -3.73 -2.14 -2.14 -4.83 -5.31 -2.13 -1.34 -4.26 -3.34 -1.82 -2.67 -5.11 -0.41 -0.02 2.02
1.79 1.83 2.75 0.63 -2.16 - -0.91 -3.56 -4.33 -1.6 - -3.3 - -5.64 - -2.22 -2.93 -3.29 - 1.56
1.79 2.8 2.6 0.92 -2.88 -2.6 -1.49 -3.2 -5.49 - - - - -5.34 - - - -1.71 -2.03 -2.05
2.61 -1.69 0.13 1.71 1.38 -2.27 0.05 -1.0 -1.63 -2.67 - -2.57 -2.28 -2.47 -2.02 -0.29 -0.89 0.18 -1.42 -0.45
3.13 1.36 1.46 1.27 1.21 -1.73 -7.5 -2.94 -6.14 -7.7 - -5.11 - -5.55 - -6.6 -5.19 -1.95 -8.5 -1.44
2.72 -4.28 1.07 2.61 1.98 -8.02 -3.61 -1.76 -7.02 -8.04 - -6.95 - -6.87 - - -2.97 -0.65 - -8.51
2.73 0.23 0.55 0.48 -0.66 -2.23 -3.8 -1.2 -0.22 -0.36 -2.06 -2.45 -1.5 -0.64 -1.54 0.8 -1.17 -0.15 -0.97 0.02
3.62 -0.37 -0.15 -1.68 -0.97 -2.46 -4.12 -0.99 -4.46 -4.16 -4.43 -3.11 -5.78 -5.89 - - - 1.72 -1.32 -1.22
2.18 2.3 1.93 0.54 0.11 -0.97 -1.17 -1.64 -1.96 -1.92 -1.37 -2.8 -2.41 -2.69 -2.28 -1.92 -2.74 -1.49 -1.39 -2.47
2.37 2.35 1.8 0.61 -0.06 -1.47 -1.67 -1.91 -2.22 -2.56 -1.76 -2.83 -4.07 -3.48 -1.93 -2.36 -2.6 -1.36 -0.82 -1.9
2.98 0.33 1.39 1.51 1.42 0.39 -4.36 -2.87 - - - - - - - - - -1.48 -2.97 -0.53
2.55 0.8 1.32 1.38 1.71 -4.59 -2.9 -2.34 - - - - - - - - - -0.03 -0.55 1.0
2.56 0.57 0.44 1.04 0.55 -2.11 -0.61 -0.66 -0.63 -2.04 -1.68 -2.36 -1.84 -1.65 -1.84 -0.58 -2.29 -0.09 0.8 -1.29
3.18 0.35 2.46 0.77 -1.04 -5.99 -5.4 -4.47 -7.89 -8.0 - -6.48 - -7.65 - -5.49 -5.87 -1.56 -1.64 0.18
2.12 0.5 2.31 2.79 0.51 - - -2.08 - - - - - - - - - -0.54 - -
2.51 0.92 1.9 -0.23 1.45 -1.44 -1.44 -1.89 -2.45 -2.92 -3.97 -2.66 -2.89 -2.76 -4.46 -2.7 -3.04 0.19 0.53 -1.39
3.02 0.62 1.66 1.58 -0.12 -3.08 -4.92 -0.99 -1.85 -0.94 -2.87 -2.3 -3.0 -4.12 -6.35 -2.62 -1.93 -0.28 - -4.26
2.8 0.98 2.49 0.19 0.55 - 0.24 -2.91 -2.43 -3.32 - -3.25 -5.43 -4.6 -2.69 -3.81 -2.6 -1.95 -4.14 -1.54
2.65 0.91 1.89 -1.16 0.65 -6.16 - -1.8 -0.72 -1.0 -1.06 -1.2 -3.26 -4.03 -1.03 1.12 -0.12 -5.83 - -
1.92 1.02 1.53 -0.02 1.43 0.56 -1.19 -1.49 -2.32 -2.61 -2.44 -1.81 -1.83 -1.87 -2.51 -0.55 -1.74 -0.17 -1.97 0.73
3.58 2.12 0.96 - - - - - - - - - - - - - - 0.78 - -
3.06 1.05 2.03 1.83 -3.44 -3.86 0.78 -5.04 -12.43 -13.04 -12.67 -11.22 -12.5 -10.8 -11.99 -13.49 -10.68 -4.89 -8.26 -5.83
3.58 0.94 1.15 0.95 -2.76 -0.27 -0.19 -5.67 -9.14 -9.53 -9.4 -10.37 -12.3 -10.84 -9.33 -9.02 -8.0 -5.86 -5.27 -6.06
3.26 -1.93 0.86 1.56 -3.26 1.89 -1.11 -1.55 -4.29 -4.42 -6.63 -4.3 -4.15 -3.76 -6.31 -2.28 -6.17 -3.24 -9.72 -2.78
3.04 1.01 0.66 -0.31 -0.91 1.57 -0.66 -1.34 -4.1 -3.58 -4.27 -1.32 -4.46 -3.18 -4.72 -4.69 -2.37 -3.23 -6.6 0.79
3.47 -0.27 0.03 -2.72 -2.68 -3.23 1.56 -3.17 -4.23 -3.21 - -1.79 - -5.82 - -2.15 - -1.93 -3.56 1.36
3.13 1.26 1.76 0.28 -1.08 0.71 -4.79 -2.85 -5.5 -4.44 -9.36 -2.82 -7.5 -4.9 - -6.78 -5.23 -2.0 -6.54 0.5
2.8 0.23 2.35 1.33 -0.45 -4.37 -0.87 -7.06 -7.96 - - -8.3 - - - - -5.79 -6.29 -5.2 1.5
3.58 2.0 - - - - - -3.31 - 0.03 - - - - - - - - - 1.55
4.32 - - - - - - - - - - - - - - - - - - -
2.8 1.01 1.96 2.26 -1.22 -1.83 -3.47 -2.01 - - - - - -5.08 - - - 0.32 - -
4.11 - - - 1.08 - - - - - - - - - - - - - -0.72 -
2.32 0.89 2.08 -1.32 0.32 - - -1.68 -0.47 -0.77 -0.82 -0.9 -3.9 -5.0 -1.5 1.47 0.38 -6.54 -8.8 -7.4
2.08 0.63 2.44 -0.96 -0.46 - - -1.66 -0.72 -0.97 -0.36 -0.91 -4.16 -8.01 -0.94 1.5 0.49 -6.64 - -
2.66 1.3 1.66 1.39 0.51 -2.72 -4.98 -2.68 - -8.77 - -8.16 - - - -3.77 -3.55 1.1 0.26 -2.52
3.4 0.82 0.48 0.79 -1.93 - -2.78 -2.63 - - - - - - - - - 1.08 0.91 -
3.06 1.17 1.59 1.86 -0.08 - -1.85 -1.82 -3.83 - - - - - - - - 0.01 -2.63 -
3.06 - 1.2 0.3 -1.29 -2.79 0.32 -1.81 -4.56 - - -3.86 -3.24 -2.15 - - - 1.02 -2.17 1.74
1.72 0.43 0.86 1.08 1.22 -1.55 -1.64 -0.62 -0.71 -0.66 -0.53 -1.26 -1.31 -1.18 -1.1 -1.05 -0.4 0.13 -0.03 -0.3
2.79 1.65 2.22 1.77 0.11 -6.0 -2.13 -3.56 - - - - - - - - - -1.37 -4.26 -
2.21 2.71 2.44 1.08 0.1 -9.88 -12.42 -3.51 -13.35 -11.61 - -13.75 - - - -10.3 - -3.05 -13.28 -8.07
2.04 2.98 2.05 1.42 -0.05 -5.55 -11.97 -3.8 -9.32 -7.98 -12.56 -14.62 -11.04 -11.04 -12.18 -8.69 -9.55 -2.97 -8.78 -9.65
1.75 0.15 0.71 0.56 0.13 -0.24 -0.84 -0.62 -0.67 -0.53 0.12 -1.03 -1.02 -0.97 0.03 -0.57 -0.6 0.05 0.34 -0.49
3.38 - -0.2 - - -1.04 -0.02 -0.45 -0.98 -0.77 0.45 -1.93 -2.03 -2.71 -1.54 - - -0.36 -2.93 1.07
1.91 0.97 0.9 -0.06 0.18 -1.0 -2.66 -0.03 -0.91 -0.85 0.44 -0.75 -0.29 -0.73 0.17 -1.63 -1.66 0.71 -3.03 -0.53
2.77 1.84 0.66 -1.23 -0.01 -0.55 -5.36 -0.72 -0.57 -0.48 -1.24 -0.75 -2.17 -1.88 -1.18 -1.45 -1.25 -0.85 -5.69 -0.74
1.97 -1.6 3.4 0.94 -1.76 - -0.45 -1.31 -2.99 - - - -0.89 -3.21 - - -0.09 - - -3.06
2.21 2.6 1.7 -0.49 -0.14 -3.66 -2.13 -2.58 -0.29 -0.63 -1.82 -3.71 -2.83 -2.45 -2.46 -0.37 -1.31 -1.19 -5.82 -5.58
2.76 -2.32 0.85 -3.78 -3.76 1.95 -0.16 -0.71 -2.66 -2.21 - -0.59 -1.34 -1.71 -4.68 -4.78 -1.81 -0.56 -4.58 1.53
2.48 1.7 2.63 1.11 -0.42 -5.68 0.91 -3.68 - - - - - - - - - -3.86 -10.78 -9.58
1.47 -0.4 0.79 1.32 0.89 -1.09 -0.91 -0.75 -0.79 -0.98 -0.52 -1.15 -1.11 -1.26 -0.34 -0.56 -0.86 0.36 0.4 0.07
2.54 2.26 2.15 1.73 -1.62 - -1.32 -2.1 -4.63 - - - - - - - - -1.63 -1.97 -3.34
2.41 1.95 2.13 2.09 0.29 - -1.78 -3.68 - - - - - - - - - -2.28 -1.92 -2.83
3.16 -0.75 1.35 2.14 0.92 - -2.74 -0.74 - - - - - - - - - -1.0 -1.41 -
3.07 0.19 1.35 1.43 -0.07 -1.36 -0.65 -0.77 -2.63 -2.37 - 0.64 - -7.12 - -5.44 -3.23 -0.78 -5.35 -
2.8 1.87 2.03 1.61 -1.53 -4.22 -1.27 -2.96 - - - - - - - - - 0.3 -5.91 -3.69
2.33 -0.44 0.62 1.06 1.25 0.58 -1.03 -1.38 -1.59 -1.71 -2.65 -1.45 -1.34 -1.7 -2.68 0.15 -1.97 -0.36 -1.58 0.46
2.16 -1.54 -0.72 1.36 1.04 -0.72 -0.74 -1.02 -0.53 -1.01 -0.6 -1.1 -0.57 0.02 -0.66 -1.5 -1.23 0.31 -1.04 0.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.