Heatmap: Cluster_81 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-0.41 - -2.68 0.84 -0.16 - -1.51 0.5 0.19 -0.49 0.93 - 0.96 0.79 0.51 0.94 -0.02 -2.01 0.87 -0.31
-0.05 - -1.07 - -0.06 - -1.68 0.75 -0.76 0.16 1.22 - -1.43 -2.46 2.35 - 0.25 - 1.45 0.98
0.29 - - -0.21 - - -2.68 0.04 0.46 -0.41 -0.38 -3.87 0.69 -0.07 -0.07 2.81 0.2 -1.1 -0.1 -0.55
0.72 -0.4 -0.56 0.73 -0.12 -2.22 -0.97 -0.18 -0.53 -0.59 0.72 -4.53 -2.73 -2.01 0.57 2.27 0.04 -1.14 -0.38 -0.49
0.59 -1.1 -1.33 -0.14 -0.49 -1.41 -0.95 0.43 0.29 0.3 -0.22 -2.4 0.84 0.62 -0.25 1.15 -0.56 -1.21 1.0 -0.41
1.57 -0.36 -0.83 1.45 0.25 -0.64 -0.76 -0.11 -0.04 -0.84 0.1 -2.62 -2.59 -4.29 0.8 -0.5 -1.76 -0.15 0.8 0.32
-0.42 - - 0.51 -1.65 - -3.4 0.47 0.26 0.75 0.98 -1.72 -0.65 -0.19 1.12 1.94 0.32 -0.63 0.54 -
-0.09 - -1.96 1.33 -0.37 - -2.81 0.48 0.39 -0.14 0.58 - 1.08 0.18 0.9 1.33 0.36 - 0.42 -
- - - - - - - 1.39 1.33 2.02 1.6 - -0.73 0.77 - - - - 2.45 -
0.67 -0.7 -3.86 1.17 -1.81 -2.66 -1.24 0.17 -0.81 0.03 -0.11 -3.82 0.41 0.37 -0.37 1.76 0.6 -1.97 0.73 -0.52
-0.45 -0.12 -1.21 0.42 - - -0.64 0.1 0.16 -1.09 0.24 -4.26 -1.62 -0.7 0.31 2.39 0.62 -1.39 1.14 -0.97
1.36 -1.04 - 0.5 -0.08 - -1.98 -0.15 0.28 -2.01 1.33 -4.15 -2.57 -1.32 -0.02 1.78 0.95 - 0.91 -0.76
- - - - 0.48 - - 0.59 1.49 - 1.26 -2.65 1.18 1.46 1.15 1.93 -0.56 - - -
1.24 -1.4 -0.57 1.72 -1.52 -2.37 -0.32 0.25 -0.67 -0.57 0.18 - -1.93 -1.64 0.4 1.31 0.34 -1.11 0.44 -0.23
0.9 -0.41 -1.16 0.96 -0.14 -1.3 -1.84 0.26 0.07 -0.33 -0.66 -2.33 0.29 0.27 0.14 0.36 -0.71 -0.24 1.36 -0.54
0.86 -1.92 -0.26 1.03 -0.56 -4.33 -1.41 -0.05 -0.1 -1.1 -0.29 -3.14 1.56 1.0 -0.24 0.77 -1.45 -0.85 0.82 -1.16
0.28 -0.09 -0.85 -0.14 -1.1 -1.64 - -0.2 -0.45 0.15 -0.31 -4.79 1.52 1.54 -0.04 1.32 0.31 - 0.42 -2.03
0.91 -1.15 -0.12 0.39 -0.16 -0.66 -0.21 -0.18 -0.59 -0.18 -1.37 - -1.53 -1.41 -0.5 1.43 0.32 -1.15 1.61 0.44
- - - - - - - 0.37 - - - - - - - 4.23 - - - -
0.32 -1.37 -2.53 0.76 -2.53 -2.19 -0.41 0.44 -0.33 -0.53 -0.55 -3.5 -0.63 0.51 0.13 1.38 0.69 -1.07 1.38 0.36
0.96 - - -0.28 -0.34 - -2.6 -0.56 -0.44 0.38 1.13 - -1.19 -2.43 1.0 2.5 1.17 - -0.64 -2.24
1.2 -0.28 -0.86 1.36 -0.34 -2.06 -1.03 -0.32 -0.15 -0.21 -0.22 -3.66 0.58 -0.14 -0.26 0.06 -2.02 0.07 1.15 -0.07
-1.55 -0.85 - -0.3 -0.7 - -0.71 0.4 0.86 0.84 1.64 -2.88 -1.44 -0.54 1.74 1.41 0.17 -3.64 -1.03 -2.89
-0.44 0.35 -1.39 3.47 - -1.48 -2.67 -0.71 - -2.67 -1.92 - 0.42 -1.72 -1.04 - - -1.98 1.24 -2.11
1.02 - -1.18 1.38 -1.23 - - 0.29 -0.0 0.66 -1.43 -2.3 -2.72 - 0.04 1.18 -0.83 0.57 1.84 0.1
0.36 -0.77 -2.78 0.36 -1.77 -0.73 -1.65 -0.6 0.48 -0.43 0.72 -3.25 0.72 -0.0 0.04 1.58 0.9 -1.43 0.55 -0.77
0.16 - -0.51 -0.19 -2.73 - -1.29 0.45 -0.25 -1.1 -0.36 -3.28 1.32 0.84 1.09 1.74 0.33 -1.04 -0.38 -0.1
-0.37 -0.77 -0.92 0.57 -0.03 -2.6 -1.31 0.0 -0.25 -0.17 0.96 -2.85 -0.83 -0.65 0.94 1.92 -0.21 -0.83 0.21 -0.39
0.69 -1.51 -1.8 0.86 -0.72 -1.76 -2.17 0.38 0.46 0.41 0.67 -1.91 0.9 0.53 0.59 0.1 -0.27 -0.51 0.01 -0.9
1.1 -2.27 -1.75 -0.15 -3.28 -0.43 -2.13 0.34 -0.89 -0.44 0.69 -2.81 1.11 0.06 0.5 1.17 -1.02 -0.28 1.2 -0.77
-0.07 -0.0 -0.99 1.6 -0.79 -2.22 -1.04 0.02 -1.01 -0.28 -0.99 -3.1 0.45 0.73 -0.09 1.53 -0.32 -0.43 0.44 -0.98
0.14 -0.23 -3.0 0.53 -1.03 -2.95 -3.85 0.6 -0.22 -0.45 1.4 - -1.0 -1.25 0.51 1.93 0.22 -2.26 1.07 -1.24
0.7 - - 3.16 -1.44 - -2.41 -0.63 -1.91 -1.41 -2.64 - 0.7 -0.22 -1.82 -0.3 0.27 -1.64 1.24 -
0.04 -0.92 -0.77 0.2 - - -2.22 -0.16 -0.23 0.49 0.58 - -0.56 -2.2 0.96 1.92 1.11 -1.55 0.98 -0.42
-0.24 - -0.72 0.35 -0.69 -2.09 -1.32 0.06 -0.03 0.69 1.04 - 0.25 -0.01 1.26 0.55 0.7 -3.4 1.14 -1.54
0.96 -0.33 -2.34 2.02 -2.33 - -3.11 -0.23 -0.29 -0.1 -0.55 -3.46 0.27 -0.24 0.63 1.53 0.41 - 0.39 -2.58
-0.07 1.99 - - - - - 2.05 0.27 3.01 - - - - 0.72 - - - - -
-0.66 -0.22 -0.6 1.2 -1.57 -3.76 -0.37 -0.29 -0.93 -1.07 0.62 -2.69 -0.17 -0.49 0.81 0.71 -0.1 0.12 1.05 0.83
- - - - 3.26 - 2.18 1.64 - - - - - - - - - - 1.46 -
-2.94 - -1.48 - -0.86 -2.35 -0.45 0.43 0.63 1.23 -0.14 -0.39 -1.06 -0.67 -0.14 1.28 2.06 -1.73 0.93 -1.76
-0.48 -0.93 -2.84 0.09 -0.45 -0.4 -0.65 0.3 0.82 0.86 0.39 -2.72 -3.48 -1.54 0.87 1.79 0.22 -0.68 0.49 -2.08
-0.6 -0.84 -1.75 0.3 -0.34 -1.27 -0.8 0.36 0.56 0.41 0.96 -2.41 -2.14 -1.26 1.06 1.46 0.54 -1.01 0.54 -1.45
0.88 -2.21 -1.79 0.92 -0.24 - -1.43 0.38 0.43 0.14 1.03 -4.34 0.55 0.13 0.61 0.29 0.49 -1.17 -0.08 -0.7
0.32 -1.29 -1.73 1.42 -0.71 - -1.16 0.32 0.29 0.05 -0.18 -6.03 0.15 -0.69 0.37 1.57 0.03 -1.91 1.01 -0.64
- - -0.43 2.71 - - - 0.56 0.34 - - - -0.97 0.01 1.56 1.44 - - 1.49 -
0.39 -0.08 -1.47 0.88 -0.95 -2.56 -1.67 0.12 -0.34 -0.26 0.81 -2.2 -0.25 -0.95 1.24 1.38 -0.4 -0.52 0.54 -0.7
0.5 -0.36 -0.21 0.76 -2.37 - -2.14 -0.04 -0.44 -0.53 -0.59 -3.48 -0.5 -0.79 -0.1 1.79 0.4 -0.01 0.87 0.89
-0.85 - - - -1.49 - - 1.17 -0.15 0.31 0.78 - 1.49 1.85 0.87 0.43 0.92 - 0.23 -1.58
0.59 -0.77 -0.71 -1.81 -3.35 -3.31 -2.7 0.05 0.37 -0.15 1.3 -2.83 0.69 0.32 0.81 0.83 0.35 -2.62 0.47 0.68
0.19 - - - - - -0.74 0.75 -0.61 1.62 0.07 - 0.78 - - - 1.61 - 2.39 0.82
0.57 -1.41 -2.52 1.01 -2.48 -1.03 -1.17 0.01 -0.25 -0.22 -0.21 -4.08 -0.54 -0.63 0.29 2.02 0.53 -0.92 0.73 -0.08
-0.65 -0.1 -1.21 1.44 -1.17 -1.51 -0.69 0.15 -0.37 -0.75 -0.3 -2.11 -2.46 -2.76 1.33 1.96 0.41 -0.39 0.49 -2.93
0.48 0.7 -0.83 0.92 -1.38 -1.23 -0.87 0.28 -0.36 -0.56 0.3 -4.34 -0.94 -0.65 -0.43 1.15 -0.19 -1.01 1.31 0.34
-0.29 0.25 -0.77 0.79 - - -0.57 0.56 -0.3 0.27 1.34 -2.72 0.78 0.44 0.93 -0.63 0.92 -0.08 -1.47 -
0.79 - - 1.15 1.44 - - 0.52 -2.25 -0.39 -0.6 - -1.73 -0.41 0.22 - - 0.34 2.64 -0.81
0.65 0.51 -1.97 1.35 -0.18 -1.48 -2.11 -0.27 -0.52 -0.17 -0.35 -2.95 0.6 0.35 -0.13 1.01 0.22 -0.3 0.09 -0.61
0.0 -0.48 -1.18 0.61 -0.43 -1.52 -0.36 -0.19 -0.13 0.04 0.77 -1.71 -0.72 -1.07 0.55 1.24 -0.47 -1.0 0.74 0.87
0.43 - -2.17 -0.61 - -1.98 -0.7 0.45 -0.21 -0.31 2.27 -3.26 -1.57 -0.08 1.75 -0.03 0.45 - 0.68 -1.57
0.56 -1.13 -0.98 -0.32 -1.15 -0.71 -1.2 -0.09 0.4 0.42 1.58 -2.5 -0.7 -0.73 1.37 0.87 -0.55 -1.02 0.38 -1.37
1.13 -0.08 0.34 2.04 - - -1.94 0.04 -1.94 -0.49 -0.29 -3.2 0.45 -1.67 -0.45 0.91 0.07 - 0.82 0.25
0.24 -1.4 -1.57 -0.13 -0.19 -1.06 -1.96 -0.11 0.52 0.07 1.0 -2.5 -1.43 -1.32 1.18 1.62 0.53 -0.57 0.43 -1.31
0.18 -2.55 -0.89 0.8 -0.79 -0.59 -2.08 -0.06 -0.07 -0.61 0.33 -2.41 -0.85 -0.09 0.99 1.92 0.67 -0.83 -0.04 -0.87
- - - - - - - 1.71 -1.47 -0.43 0.36 - 1.13 -0.01 0.3 3.17 - - -0.13 -
-0.99 1.16 0.15 1.7 - - -0.7 0.05 -1.57 - -0.02 - 1.23 - - 2.28 - - 0.1 0.71
-0.47 -0.35 0.8 1.19 -0.36 - -1.29 -0.29 -0.17 0.5 1.6 - - -0.68 1.66 0.51 0.6 - -1.39 -
0.72 -0.24 -2.25 1.89 - -0.17 -3.25 0.02 -0.36 -0.63 -0.85 - -0.27 0.14 0.42 1.11 1.12 -0.59 0.24 -2.66
- - - - - - 0.93 0.83 0.09 - 1.53 - - - 3.1 1.92 - - - -
0.02 0.37 -1.62 -0.46 -2.13 -1.04 -0.54 0.35 -0.11 -0.35 -0.03 -2.6 0.01 -0.41 0.67 2.05 0.44 -1.11 0.06 -0.41
1.07 -2.18 -1.08 2.59 0.16 -4.08 -5.04 -0.22 -0.87 -0.84 0.24 -3.46 -1.05 -0.6 0.66 0.53 -0.46 -0.2 -0.49 -1.89
-0.09 - - 1.56 0.01 - -0.28 -0.23 -0.52 -1.96 1.78 -1.52 -1.54 -1.59 1.0 0.73 - -0.33 1.65 -1.24
0.89 -0.28 -2.37 2.17 -2.35 -0.86 -0.32 0.02 -0.47 -0.34 -0.9 -2.6 -1.39 -0.67 -0.82 0.78 -0.84 -1.27 1.25 0.26
-0.13 -0.42 -0.74 1.07 0.31 -1.01 0.35 -0.15 0.08 -0.65 0.53 -2.37 -1.71 -1.6 0.49 1.1 -0.15 -1.0 0.85 0.05
- - - - - - - 1.09 -0.36 0.22 - - - - 2.53 - - - 3.35 -
-0.56 -1.47 -2.81 -0.19 -1.67 -3.02 -0.34 0.22 0.27 0.15 1.46 -3.16 -2.05 -1.93 1.46 1.21 -0.4 -0.64 1.35 -0.2
0.01 - -2.19 -0.48 - -0.99 -0.32 0.01 0.39 0.01 2.01 -4.14 0.46 -0.64 1.84 -0.31 - -0.26 -0.35 0.42
0.8 0.79 -1.11 1.6 - -2.36 -2.35 -0.27 -0.38 -0.48 0.28 -3.65 -0.18 -0.65 0.09 1.77 -0.28 -2.74 0.37 -0.37
0.42 0.09 -2.07 1.22 - - -1.92 0.14 -1.42 -0.56 -1.1 -4.02 0.91 0.73 -0.71 2.49 -1.57 - 0.18 -0.21
- - - - 2.14 - - 0.59 - - - 0.07 2.33 - - 2.74 - - 0.43 -
1.01 0.65 -1.69 2.04 -0.45 -1.57 -0.81 -0.73 -1.85 -0.62 -1.94 - 0.63 0.15 -2.04 1.45 -0.52 -1.34 0.57 -1.41
-0.11 0.58 -1.0 0.93 -0.3 - -1.03 0.03 0.18 0.13 0.74 -2.49 0.12 -0.59 0.5 0.84 -0.98 -0.7 1.34 -2.67
-2.85 - - -0.26 - - - -0.19 0.46 0.07 1.8 - 0.73 1.05 1.82 0.83 1.19 - -0.94 -1.25
0.87 - 0.05 1.76 1.75 - 1.09 0.34 -1.28 - - -2.73 -2.11 -0.79 -0.15 0.34 - -0.99 1.33 -1.24
0.68 -1.31 -1.43 -0.28 0.36 0.59 -0.33 0.44 -0.37 -0.5 -0.46 -1.05 -1.3 -1.08 0.21 0.74 -0.15 0.1 1.24 0.2
-0.0 -0.22 -0.4 1.61 -1.11 -1.09 -2.13 -0.21 -0.56 -0.02 0.12 -4.74 0.31 -0.4 -0.86 2.19 -0.36 -2.13 0.04 -1.47
-0.08 -1.48 -3.64 0.82 0.22 -1.24 0.51 0.06 0.38 -0.65 0.67 -2.69 -0.82 -0.96 0.55 1.21 0.04 -1.04 0.53 0.36
0.56 -0.95 -3.7 0.33 -0.24 - -0.92 0.17 0.59 0.57 0.82 -2.85 -0.05 -0.74 1.08 1.19 0.17 -1.5 -0.03 -0.22
-0.76 - - 0.32 -1.29 -0.19 -1.04 0.06 -0.32 0.13 -0.44 -2.36 1.18 1.06 1.46 0.77 1.29 - -0.12 -1.64
0.84 - - 2.38 0.13 -2.08 -1.8 -0.22 0.14 -1.97 -2.38 - 0.31 -0.76 -2.36 1.23 0.4 - 1.55 -1.45
0.14 - -2.49 0.22 - - -3.34 0.38 -0.2 0.04 0.78 - 0.31 -0.24 0.9 2.42 1.31 - -1.2 -1.67
-0.84 0.27 - - - - -1.6 0.51 -0.04 -1.64 2.37 -1.76 -2.29 -0.71 1.52 1.89 - -1.06 0.88 -
1.56 - - 0.64 0.1 -0.86 -1.76 -0.19 -0.4 -0.87 -0.08 -3.01 1.65 -0.93 0.35 0.96 - - 0.79 0.8
0.85 -0.61 -0.04 1.52 -0.05 -0.43 -0.11 0.05 0.43 -0.26 -0.81 -3.72 -2.94 -2.16 0.36 1.1 - -0.82 0.41 0.6
- - - 1.11 0.5 - 1.21 -0.24 -1.18 -1.4 0.89 - -1.93 -0.07 -0.04 1.92 - -0.76 1.8 -0.89
0.25 0.04 -1.3 0.76 -0.79 -2.39 -0.9 0.21 0.18 -0.13 0.36 -3.68 0.22 -0.25 0.41 1.34 -0.31 -1.08 1.13 -1.08
0.77 0.79 -0.56 0.98 -2.12 -3.84 -1.48 -0.28 -0.73 -0.89 0.51 -2.98 0.4 -0.23 -0.03 1.64 -0.15 -2.68 0.12 0.42
0.34 -2.17 -2.7 -0.31 - -3.14 -3.03 0.69 -0.42 -0.88 1.54 -2.1 -2.29 0.3 1.46 1.8 0.68 -2.06 0.1 -0.54
-0.7 -0.15 - 0.39 -1.78 -1.56 -1.38 0.25 0.15 -2.09 1.55 -3.86 -0.65 -0.51 1.45 1.25 0.78 -2.09 0.69 -0.7
0.43 - - -0.22 - -1.58 - 0.01 -1.22 -0.73 -0.38 -1.87 -1.69 -0.75 0.75 2.91 0.4 - 1.35 -1.22
0.83 - - - - - - 0.76 0.68 1.63 - - - - 2.04 0.92 - - 2.54 -
0.33 0.51 -1.24 1.05 -1.54 -1.46 -0.68 -0.11 -0.65 -0.36 -3.34 -3.62 0.27 -0.77 -0.44 1.05 -0.02 -1.7 1.55 1.11
0.11 0.34 -1.41 1.25 - - -1.43 -0.11 -0.54 -2.54 0.13 -3.38 1.18 -1.04 -0.25 1.94 -0.18 0.27 -0.19 0.22
0.92 -1.0 -1.53 0.13 0.13 -0.59 -0.43 0.02 -0.5 -0.98 0.87 -2.82 -2.82 -3.65 0.28 0.62 -0.73 0.31 1.85 0.09
-0.03 - - -0.01 -0.4 -2.8 -1.4 -0.06 0.28 -0.06 1.09 -2.87 -0.9 -0.3 1.6 1.37 -0.36 -2.1 0.83 0.67
-0.12 -2.22 -3.39 1.42 -3.22 - -2.19 -0.2 -0.7 0.09 1.34 -2.57 -0.03 -0.89 1.87 1.07 -0.02 -2.5 0.21 -0.12
1.32 - -0.23 -0.6 -0.62 -1.1 -0.75 -0.11 -0.1 -1.11 -0.03 -3.27 1.05 1.05 -0.89 1.82 -1.19 -2.47 0.45 -0.54
0.51 - -0.68 1.7 -0.58 - -1.53 0.04 -0.91 0.12 1.13 -3.23 0.48 -1.54 -2.34 1.8 0.72 -6.05 -0.11 -0.44
1.02 -2.15 -1.46 0.98 -0.63 -2.39 -1.53 0.05 -0.55 -0.67 0.92 -2.33 -0.37 -0.27 0.26 1.64 -0.32 -1.13 0.45 0.32
0.73 -0.02 -1.66 -0.48 -2.05 - -1.03 0.0 0.33 0.11 -0.12 -2.38 0.72 0.26 0.3 0.88 0.39 -1.95 0.82 0.92
0.35 - - 1.1 -1.44 - -0.2 0.45 0.12 0.06 0.97 - -0.03 -2.49 0.29 0.1 1.36 - 1.94 -
-1.03 - - 1.03 -1.67 - -0.75 0.13 -0.8 0.11 1.27 - -1.37 -0.26 2.41 1.78 - - 0.52 -
0.74 0.17 -0.88 -0.29 -0.31 -2.66 -1.04 0.12 0.05 -2.15 -1.03 -4.97 0.39 -0.29 0.85 2.18 -1.68 -0.11 -0.45 0.12
-0.18 - -0.24 1.47 - - -0.86 0.68 0.02 -0.03 - - 0.75 -1.63 - 2.27 1.6 - 0.58 -
0.53 -1.34 0.08 0.2 -0.12 -2.16 -0.63 -0.65 -0.75 -1.32 1.02 -4.45 -2.67 -1.62 -0.09 2.31 0.77 -0.31 0.33 -1.69
-0.9 -1.6 -1.18 1.27 -1.6 -0.93 -0.92 0.67 -0.73 0.01 1.66 -2.33 -0.5 -0.51 0.06 1.7 -1.44 -0.8 0.41 -1.4
1.05 - - - -1.23 - -2.24 -0.36 -2.17 -0.64 0.49 -3.34 0.88 -0.19 -1.61 3.13 0.73 - -0.56 -
-0.92 - - 0.15 -2.46 -0.63 -1.3 0.55 -0.07 0.74 -1.04 -2.86 -1.28 -0.95 2.23 0.81 0.05 -0.69 1.46 -0.64
- - - 2.98 - - - -0.66 -0.42 - - - - - - 3.3 - - -0.2 -
0.39 0.25 -1.38 0.69 0.05 -3.81 -1.34 0.1 -0.21 -0.25 0.61 -2.77 -0.38 0.26 -0.0 1.79 -0.01 -0.55 -0.09 -0.99
0.41 0.86 -0.71 0.18 -2.21 -2.11 -1.48 -0.26 0.34 -1.58 -1.35 - 1.55 0.21 -0.17 2.08 -0.5 -0.77 -0.7 -1.4
1.54 - -1.38 0.18 - - -1.23 0.01 -0.18 -2.38 -0.63 - -0.21 -0.13 0.39 2.26 1.44 -1.57 0.28 -1.82
0.8 -0.43 -3.77 0.67 -0.39 -3.57 -0.51 0.04 0.19 0.58 0.1 -2.13 0.71 0.44 0.62 0.75 -0.17 -1.53 0.33 -0.66

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.