Heatmap: Cluster_9 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
2.16 - -1.73 -0.38 -1.6 -2.24 -1.21 -0.07 2.39 -0.46 - -1.55 -0.43 1.43 -5.06 -5.35 -1.64 -0.65 - 0.81
-0.31 0.67 -0.35 -4.68 0.23 -0.21 -1.62 -0.36 1.31 0.57 -0.79 -0.16 -0.27 0.55 -0.42 0.46 -0.88 0.34 -0.25 0.18
- - - - - - - 2.2 3.95 - - - - - - - - - - -
- - - - - - - 0.64 - - - 2.97 3.41 - - - - - - -
- - - - - - 2.14 -0.7 - 2.17 - - 0.58 0.41 - - 2.03 - - 1.83
- - - - -1.24 -0.13 - -0.1 1.62 2.26 -1.35 -3.14 -2.5 -0.45 0.46 2.12 -1.22 -1.52 0.65 -1.42
- - 0.76 - - - 0.7 -2.09 1.48 2.68 1.01 - 2.39 - - - - - - -
0.32 - - 2.69 - - 1.59 0.93 0.54 - 1.22 - - -0.38 1.1 - - - -0.48 -
-1.97 - 3.25 - - - -1.8 2.16 -4.5 -2.24 - -3.19 - -3.07 - 1.67 0.39 - -5.04 -1.15
- - -0.37 - 1.47 - - -0.41 1.68 1.67 1.08 1.38 0.45 -0.55 -1.63 - 1.16 - - -
- - 2.57 - - - - -1.17 1.81 - 2.33 - - - 2.34 - - - - -
-0.53 -0.98 - -0.84 0.28 -0.71 -2.12 -0.1 1.37 1.68 0.65 -0.13 -1.34 -1.87 -0.75 0.51 -0.21 0.42 0.12 0.01
-1.63 -0.82 - - - -0.1 -1.12 -0.28 1.35 0.99 1.46 -0.38 -1.03 -1.09 1.18 -0.69 0.43 -0.15 1.19 -1.07
- - - - - - - 0.38 - - - - - - - - - - - 4.22
- - - - - - -1.21 -0.04 -2.01 2.38 - - - -1.95 - 2.16 1.97 - 2.17 -
0.19 - - 1.29 0.63 - 0.83 -1.54 1.54 1.4 1.11 -2.37 -1.59 0.72 0.97 -0.13 - - - -
-1.56 - -1.28 -0.18 - - -3.46 0.87 2.42 2.73 -0.64 1.48 - -1.07 -1.31 -11.11 -13.79 - - -2.73
0.54 -2.82 -4.35 - 0.27 0.73 -6.79 0.46 1.62 0.6 -2.36 0.18 -1.38 -1.2 -2.11 -0.45 0.9 0.3 1.03 0.34
-2.03 - 1.17 - - - - -0.46 2.23 1.58 - -0.93 - - - 1.31 - - 2.61 -
- - - - 4.07 - - 1.69 - - - - - - - - - - - -
-1.27 -3.23 - -0.98 - - - 0.3 2.16 3.46 -0.61 - - 0.54 - - - -2.72 - -
0.45 - - - - 0.5 -0.45 -0.32 2.81 - -0.37 - -2.87 -1.43 - -0.68 -0.91 1.97 0.75 -0.6
0.97 - 1.08 - 2.09 - 0.16 0.23 1.35 1.66 0.91 -1.02 - -0.53 - - - - -0.68 -
- - - - - - - - 1.56 2.44 1.5 - - - 2.46 - 1.71 - - -
- - - - - - - 1.5 4.1 - - - - - - - - - - -
- - - - - - 1.39 - 1.65 2.5 - - - - 3.11 - - - - -
- - - - - - - -1.39 2.14 - - - - 1.21 - - - 2.67 0.24 2.42
- - - - -0.37 - -6.49 0.85 1.66 0.05 - -3.32 -0.47 - -0.91 0.02 2.21 1.29 -2.27 1.85
- - - - - - - 1.6 - 4.08 - - - - - - - - - -
- - - - - - -1.15 0.35 3.22 - - - -1.02 - 2.69 - 1.02 - - -
- - - - - - - -1.18 2.45 1.69 - - 2.04 - 2.24 - - - 1.02 -
0.2 - 0.51 - 0.35 - -2.72 0.5 -4.57 - 2.38 -3.01 1.18 -1.81 2.06 - 0.59 - -3.36 -0.13
- - - - - - - 2.43 3.87 - - - - - - - - - - -
-0.26 - - - -0.1 - -0.92 -0.38 1.89 1.64 0.99 -2.15 - -2.65 -1.34 2.14 1.18 -1.42 -1.82 -
- - - - - - - - 4.32 - - -4.25 - - - - - - - -
- - - - - - - -0.16 3.74 2.51 - - - - - - - - - -
- - - - - - - - 3.41 - - - 2.38 2.05 - - - - - -
- - - - - - - - 4.32 - - - - - - - - - - -
-3.54 -1.39 -1.48 - -2.46 - -2.28 -1.33 1.8 0.22 2.4 -1.39 0.41 -0.13 1.28 -0.85 - - 1.2 -0.84
-1.16 1.9 -0.27 2.44 - - -0.12 0.48 0.43 - - - -1.6 0.23 - 1.24 - - 1.03 -
- - - - - - 3.68 - 2.85 - - - - - - - - - - -
- - - - - - - - 4.32 - - - - - - - - - - -
-2.47 - - - - - - -1.39 2.06 2.42 2.28 -0.75 -2.92 -1.95 1.88 - -2.03 - - -2.82
- - - - - - - - 4.32 - - - - - - - - - - -
- - - - - - - - 2.1 1.96 2.6 - - - 2.52 - - - - -
-2.57 -1.18 -2.34 -2.22 -2.92 -1.69 -1.99 -0.12 1.3 2.99 - 2.13 -3.15 -2.21 - - -0.77 -1.29 -1.66 -0.06
- - - - - -0.48 0.99 0.15 1.53 1.58 1.1 0.15 0.74 -2.32 - 1.21 0.88 0.07 - -
- - - - - - - -0.26 2.45 - - - - - - - - - 1.88 3.33
- - - - - - - 0.29 - - - - - - - - - 4.23 - -
- - - - - - - -0.21 2.41 3.01 - -1.01 - -0.91 0.92 - -0.19 -0.85 0.5 -
0.73 - - - - - 1.07 -0.56 3.43 0.82 - - -0.66 0.83 - - - - -0.71 -
- - - - - - - -0.76 3.27 2.45 - - 2.1 - - - - - - -
- - - - - - 1.71 -0.68 2.07 2.12 1.3 -0.65 - 1.82 - - - - -0.17 -
- 2.68 - - 1.67 - - -0.04 1.71 -0.3 - - - - 0.43 - 2.01 - - -
2.64 - - - - - - 0.36 2.93 - - - - - - - - - 2.29 -
-2.62 - -1.73 - 0.89 - 0.54 -0.22 0.89 1.54 1.38 -1.64 1.22 -3.12 1.46 - -1.61 -0.27 0.12 -2.02
- - - - - - - 2.26 - - - - - - - - - - 3.93 -
- - - - - - - - 2.12 3.95 - - - - - -2.07 - - - -
- - - - - - -1.63 0.08 2.73 1.59 -0.76 -1.9 2.58 -0.14 -1.02 -0.6 -4.5 - - -4.63
1.06 - - - -0.98 - - -3.03 3.34 2.06 - - -7.06 - - - - - 1.56 -
- - - - - 0.84 -2.08 -1.69 2.05 2.32 1.29 - - -4.18 -3.07 -1.72 - - - 2.49
- - - - - - - 4.32 - - - - - - - - - - - -
-0.45 -0.31 -1.48 - -0.38 1.58 1.91 -2.64 2.24 1.52 - -3.42 - -2.87 -1.7 - - -1.64 0.44 -0.73
- - - - - - - - 2.04 3.82 - - - - - - - - 0.39 -1.14
- - - - - - - 4.32 - - - - - - - - - - - -
0.17 - - - - - - -1.09 1.14 - 1.03 - 0.77 3.14 0.94 - - - 0.79 -
0.7 -3.65 -4.26 -4.71 0.32 1.12 -2.93 0.57 0.62 0.34 -1.74 -0.12 -1.22 -1.68 -1.54 -1.94 -0.11 1.35 1.13 1.11
-1.92 -2.79 - -1.24 -2.82 - - -0.42 3.8 1.86 - -4.82 -1.55 -3.87 -1.86 - - - -4.39 -
- 2.19 - - - 1.33 -1.53 -0.05 2.4 1.93 - -2.17 - 0.95 - - - - - -1.41
- - - - - - - 1.55 4.09 - - - - - - - - - - -
1.39 - - - - 2.68 - 0.65 3.23 - - - - - - - - - - -
0.56 - -3.5 - -1.92 1.59 -5.01 -1.02 2.11 2.43 -2.15 -2.47 -1.4 -2.44 -1.99 -2.5 -1.33 -0.46 0.58 -0.18
- - - - - - - - 4.32 - - - - - - - - - - -
- - - - - - 0.92 -0.06 0.88 0.76 - -0.18 0.38 1.94 - - - 2.61 0.58 -
-2.34 - -1.34 - 1.6 1.64 -2.28 -1.09 1.61 1.18 -0.43 -4.07 -0.78 -2.37 -1.25 0.15 0.49 -0.16 -1.38 0.56
- - - - - - - -0.0 2.53 1.26 1.89 - - - - 2.83 - - - -
-0.92 -0.36 -1.53 -0.82 -2.37 -0.65 - 0.1 1.79 2.16 -2.55 -2.16 -1.3 0.04 -1.68 1.53 -1.03 -0.67 0.6 -1.78
0.34 0.31 0.19 0.32 -0.37 0.05 -1.06 0.0 0.91 0.39 0.35 -0.25 -1.74 -1.38 0.25 0.25 -0.14 0.26 0.0 -1.6
- - - - - - - - 4.32 - - - - - - - - - - -
2.7 - - - - - - - 3.14 - - - - 2.22 - - - - - -
- - - - - - - 4.32 - - - - - - - - - - - -
-2.5 -3.37 -2.49 - -1.02 - -1.65 0.47 2.48 0.09 -1.59 -2.07 -0.86 -0.68 - 2.66 1.35 -4.58 -5.94 -
- - - - -6.86 -6.4 - -1.05 2.21 1.35 - -1.93 1.72 1.5 -5.38 2.29 -0.05 -4.34 -8.12 -11.2
- - - - - - - - 2.55 - - - 3.82 - - - - - - -
- - - - - - - 1.5 4.1 - - - - - - - - - - -
- - - - - -0.82 - -1.81 2.33 -0.28 -0.75 -0.44 -0.55 2.5 -3.24 - - 2.35 - -1.23
- - - - 1.98 - - - 4.01 - - - - - - - - - - -
- - - - 1.98 - - - 4.01 - - - - - - - - - - -
-1.52 - -0.56 - - - - -0.46 2.42 2.36 1.38 0.12 - -1.95 0.24 -0.2 0.56 - -1.93 -
-8.6 0.65 -1.91 -5.49 -3.79 -7.99 -6.01 -1.42 2.35 0.14 -3.45 -0.47 -0.18 2.9 -6.73 -3.65 -4.78 1.08 -4.87 -4.7
- - - - - - - -0.95 2.71 1.94 1.62 - - 1.65 - - - - - 1.54
- - - - - 1.72 - -1.24 1.37 - - 0.43 1.17 1.86 1.15 - 1.41 - 0.67 -
-0.69 -0.98 -4.69 -0.98 -0.23 0.26 -2.09 -0.21 2.42 0.99 -2.23 0.24 1.53 0.81 -2.85 -4.81 -7.62 -2.23 -1.83 0.18
- - - - - - - 0.21 3.02 1.28 - 1.54 - - 0.99 1.77 - - - -
- - 2.34 - - - - - 1.58 - - - - - - - - 2.15 - 2.9
-0.53 0.79 1.07 1.03 -0.75 - 0.2 -0.16 1.86 0.3 -0.45 -4.17 0.18 -0.78 -0.98 -2.08 - -2.42 0.77 -0.31
0.02 -0.44 -0.53 1.1 -1.6 0.59 -1.33 -1.08 0.45 1.86 - -3.58 0.55 -0.05 -0.25 1.62 0.09 - -2.22 -
- - - - - - - 1.0 4.17 - - - - - - - - - - -
- - - - - - 2.28 1.76 - - - - - - - - - - 3.56 -
- - - - - - - - 4.32 - - - - - - - - - - -
- - - - - - - -0.26 3.85 - - - - - - - - - 2.24 -
0.36 - 2.32 - - - 0.47 0.36 1.74 2.1 - - - - - - - - 1.78 -
-0.36 -0.84 - - -0.87 -0.8 0.74 -1.43 0.96 0.2 1.27 -0.44 -0.04 1.11 0.13 1.09 1.04 - -1.21 -1.26
-0.05 -1.78 -2.94 1.57 -0.14 -1.67 -0.86 -1.38 2.09 -0.5 0.1 -0.48 -0.89 -0.7 -0.78 1.64 0.32 -2.12 -2.31 -2.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.