Heatmap: Cluster_84 (HCCA)

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(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_00144	-4.74	0.63	-0.09	-	-	-4.58	3.88	-1.27	-3.06	-2.38	-2.04	-1.34	-2.06	-0.27	-2.95	-	-	-	-6.19	-3.46
Gb_00313	-	-	-	-	-	-	4.15	-3.11	-0.8	-1.59	-	-1.33	-	-	-	-	-	-	-3.19	-0.47
Gb_00457	-4.38	-	-4.58	-	-3.91	2.36	3.85	-6.9	-6.22	-	-	-7.45	-5.95	-	-	-6.29	-5.26	-4.36	-3.7	-4.52
Gb_00582	-	-	-	-	-	-0.42	4.26	-8.45	-	-	-	-5.13	-	-	-	-	-	-	-4.09	-
Gb_00681	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_00953	-	0.78	-0.31	-	1.31	-	3.7	-6.73	-2.95	-1.19	-	-	-	-	-	-	-	-1.43	0.13	-
Gb_01220	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_01999	-	-	-	-	-	-1.59	4.3	-10.89	-7.29	-	-	-9.37	-	-	-	-	-	-	-7.85	-6.48
Gb_02111	-	-	-	-	-	-0.66	4.27	-7.99	-	-	-	-	-8.34	-8.39	-	-	-	-	-4.25	-6.29
Gb_02170	-0.14	-2.29	-1.92	-1.48	-0.83	0.42	3.12	-1.45	-2.78	-1.99	-2.51	-0.61	-2.16	-1.09	-4.31	-5.48	-2.21	-1.44	-0.87	2.06
Gb_02230	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_02863	-2.27	-2.85	-2.04	-2.66	-	-1.42	4.19	-4.03	-4.53	-2.54	-	-	-4.27	-4.98	-3.32	-	-	-3.34	-4.84	-
Gb_02984	-4.66	-	-	-1.99	-	-	4.16	-1.87	-2.67	-	-1.41	-3.34	-3.95	-2.77	-	-	-3.63	-	-0.68	-3.98
Gb_03142	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_04229	-0.57	-2.35	-0.45	-1.69	-0.58	0.33	2.78	-3.02	-	-4.32	-	-	-	-4.9	-	-3.2	-	2.3	1.54	0.15
Gb_04938	-	-	-	-	-	-	4.11	-0.84	-	-	-	-	-	1.12	-	-	-	-	-	-
Gb_05596	-7.82	-	-	-5.22	-	0.38	4.21	-7.89	-8.5	-	-	-8.9	-8.26	-5.36	-	-	-	-	-3.71	-6.18
Gb_07207	-1.65	0.84	0.91	-2.03	-2.98	-3.15	3.81	-2.81	-5.83	-6.07	-4.38	-1.62	-1.83	-1.04	-4.02	-5.37	-6.05	-4.81	-6.04	-4.89
Gb_07554	-	-	-	-	-	2.06	3.96	-6.84	-	-3.31	-	-5.94	-5.52	-	-	-3.84	-	-	-3.36	-
Gb_07555	-7.52	-	-6.41	-3.85	-	1.23	4.13	-7.74	-5.86	-5.77	-6.66	-7.52	-7.89	-8.06	-	-5.05	-	-	-6.05	-
Gb_07626	-	-	-	-	-	-	4.25	-6.76	-	-	-	-	-	-	-	-	-	-	-	0.02
Gb_07630	-3.61	-	-	-	-	-	3.95	-6.89	-	-1.97	-	-	-	-3.03	-	-	-	-	2.04	-
Gb_07688	-4.18	2.83	-4.15	-7.19	-5.09	-4.84	3.67	-14.28	-	-	-	-	-	-	-	-	-	-7.94	-10.51	-7.52
Gb_08782	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_08783	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_09124	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_09278	-1.32	2.3	0.26	-1.72	-0.53	0.45	3.05	-2.96	-2.48	-2.92	-1.12	-3.29	-2.52	-2.84	-1.36	-3.77	-4.0	-1.24	-1.23	-3.09
Gb_09754	-	-	-	-	-	-4.46	4.3	-6.58	-7.35	-	-	-	-2.1	-4.72	-	-	-	-	-6.33	-
Gb_09774	-	-	-	-	-	-1.88	4.3	-	-	-	-	-	-	-	-	-	-	-	-4.71	-
Gb_10504	-	-	-	-1.96	-2.08	2.3	3.8	-6.44	-5.24	-4.48	-3.68	-	-	-4.06	-3.85	-	-	-1.85	-4.18	-
Gb_10697	0.4	0.57	-1.6	0.11	0.2	-0.08	3.34	-1.99	-3.37	-1.4	-3.7	-2.95	-4.77	-4.1	-2.14	-	-1.76	-1.42	-0.09	-0.54
Gb_11018	-5.68	-	-6.3	-4.59	-	1.22	4.13	-7.34	-7.19	-	-	-6.66	-7.63	-6.72	-	-	-	-6.46	-4.06	-5.57
Gb_11170	-4.71	-	-3.55	-1.99	-	1.69	4.03	-6.04	-5.28	-	-	-4.65	-5.09	-	-	-	-	-	-	-
Gb_11342	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_11973	-3.5	-5.21	-4.09	-3.5	-4.56	2.34	3.78	-3.88	-4.41	-4.52	-4.19	-2.93	-3.72	-3.72	-4.98	-4.61	-3.92	-5.11	-2.83	-4.27
Gb_12197	-0.1	-1.07	-1.33	-1.85	-1.65	-1.7	3.24	-0.14	0.12	0.4	-2.3	-0.03	-2.2	-1.68	-2.11	-0.39	0.53	-4.6	-2.9	-2.24
Gb_13048	-	-2.26	-	-	-3.42	1.37	4.04	-5.56	-5.27	-4.16	-	-5.39	-	-4.92	-	-1.91	-	-	-2.43	-
Gb_13684	-	-	-	-4.55	-	-1.04	4.28	-9.46	-	-	-	-	-	-	-	-	-	-	-6.9	-
Gb_13824	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_14109	-	-	-	-	-	0.19	4.24	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_14245	-5.92	-	-	-	-7.28	-	4.31	-8.82	-	-7.09	-	-	-	-	-	-	-	-	-	-2.37
Gb_14456	-2.38	-3.69	-	-	-1.56	0.9	4.09	-4.5	-	-5.59	-	-3.25	-4.55	-	-	-	-3.02	-4.9	-5.35	-4.15
Gb_14533	0.65	1.64	1.36	0.14	1.18	-5.22	2.9	-3.75	-3.78	-3.32	-4.18	-1.42	-	-3.38	-15.31	-4.72	-1.07	-2.24	-1.77	-3.98
Gb_14542	0.65	0.65	-0.02	1.56	1.3	-3.27	3.09	-3.28	-5.11	-3.05	-4.65	-0.83	-5.2	-2.93	-4.79	-6.64	-3.52	-3.14	-2.85	-1.29
Gb_15170	-5.89	-5.1	-7.11	-	-6.1	1.08	4.14	-6.85	-8.15	-7.09	-6.32	-7.17	-5.61	-5.92	-5.47	-5.75	-	-5.8	-4.11	-4.64
Gb_15491	-	-	-	-	-	-	4.02	-2.99	-	-	-	-	-	-	-	-	-	-	-	1.86
Gb_15647	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_16050	-6.25	-	-4.72	-4.89	-6.01	1.44	4.08	-6.08	-6.52	-7.37	-	-3.66	-6.92	-7.04	-	-7.3	-6.27	-6.14	-4.77	-5.82
Gb_16344	-7.6	-	-5.61	-4.32	-7.61	0.63	4.2	-8.15	-7.33	-	-	-7.4	-	-9.11	-	-	-	-	-5.57	-5.85
Gb_16428	-1.74	-2.1	-4.7	-1.56	-2.51	1.82	3.59	-3.12	-3.22	-5.66	-4.95	-3.56	-2.03	-1.27	-2.44	-3.34	-	-1.3	0.24	-1.14
Gb_16654	-	-	-	-	-	-2.1	4.26	-3.97	-	-2.75	-4.0	-3.89	-	-	-4.21	-	-	-4.03	-4.5	-4.28
Gb_17159	-6.47	-	-	-	-	1.09	4.09	-6.37	-7.15	-6.32	-5.62	-7.36	-	-5.6	-	-	-	-5.75	-0.45	-5.37
Gb_17264	-0.45	1.2	-0.52	-1.81	0.18	-0.26	3.09	-1.67	-1.82	-2.61	-2.65	-2.69	-2.12	-1.73	-2.62	-1.45	-1.92	0.06	0.54	-0.76
Gb_20475	-5.56	-5.09	-6.11	-2.96	-4.23	1.2	4.12	-6.73	-	-6.06	-	-5.58	-5.89	-	-	-	-	-	-4.64	-6.34
Gb_21481	-	-	-	-3.48	-	-1.06	4.27	-	-	-	-	-	-6.52	-	-5.41	-4.89	-5.07	-	-4.0	-
Gb_21902	-4.87	-	-7.07	-4.78	-6.97	2.78	3.7	-8.59	-9.92	-7.84	-	-7.68	-7.72	-9.57	-7.27	-	-	-5.62	-6.43	-6.78
Gb_22039	-6.49	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-5.59
Gb_22902	-	-	-	-	-	-	4.28	-7.84	-	-	-	-	-1.19	-3.64	-	-	-	-	-	-
Gb_22905	-6.31	-	-	-	-	-0.63	4.26	-6.81	-6.92	-	-4.44	-5.22	-4.93	-6.85	-	-4.05	-	-	-4.88	-
Gb_23499	-6.33	-	-6.34	-5.71	-5.72	1.4	4.1	-9.38	-8.14	-	-	-6.47	-8.75	-8.87	-	-5.71	-5.45	-7.58	-5.45	-7.5
Gb_23690	-6.82	-	-	-2.39	-5.58	1.34	4.03	-6.73	-	-	-4.72	-7.64	-	-	-6.9	-4.98	-	-	-0.35	-
Gb_23818	0.12	0.47	1.46	-1.8	0.14	-	3.46	-2.04	-2.39	-2.74	-3.6	-4.45	-	-3.36	-1.38	-	-	-2.69	-0.55	-1.39
Gb_24476	-3.77	3.24	-5.02	-6.59	-5.27	-7.85	3.38	-17.72	-	-	-	-	-12.73	-11.2	-	-	-	-10.48	-12.95	-
Gb_24492	-	-	-	-	-	-	4.28	-	-	-	-	-	-	-	-	-	-	-	-0.71	-
Gb_25258	-3.61	-3.05	-2.75	-	-7.93	-3.57	4.04	-7.78	-	-7.26	-8.12	-4.27	-	-7.94	-	-	-	-3.68	-0.34	1.08
Gb_25998	-2.18	-	-3.41	0.15	-	1.53	3.9	-4.62	-5.41	-	-2.05	-	-	-5.06	-3.75	-2.86	-	-	-2.4	-3.81
Gb_26535	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_26995	-3.51	-3.05	-5.68	-2.73	-4.09	0.54	4.14	-6.09	-	-5.83	-6.06	-	-	-5.49	-	-6.32	-	-	-1.51	-
Gb_27172	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_27184	-	-	-	-	-	-	4.05	-1.87	-	-	-	-1.98	-	-	-	-	-	1.47	-2.62	-
Gb_27617	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_27909	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_28252	-0.95	-0.39	-0.17	-0.51	-1.55	1.93	3.25	-1.81	-4.13	-2.29	-	-0.26	-1.58	-3.95	-	-	-0.06	-2.6	-1.25	-2.85
Gb_28281	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_28845	-	-	-	-	-	-	4.32	-8.27	-	-	-	-	-	-	-	-	-	-	-	-4.32
Gb_29876	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_30267	1.73	1.3	-0.71	0.84	-	-	3.49	-3.52	-	-	-	-	-	-	-	-	-	-	-	-1.12
Gb_32048	-6.72	-5.0	-0.91	-3.72	-2.24	-0.98	3.9	-6.04	-10.35	-	-	-8.59	-6.28	-7.21	-	-6.72	-4.92	-0.42	0.16	0.81
Gb_32403	-	-	-	-	-	-2.0	4.3	-7.85	-	-	-	-	-	-	-	-	-	-	-	-
Gb_32650	-	-	-2.21	-0.65	-	1.98	3.78	-3.45	-	-	-	-	-	-	-1.44	-	-	-	-0.31	-2.65
Gb_32781	-2.51	-	-	-	-	0.08	4.16	-5.66	-4.42	-	-	-	-	-	-	-	-1.03	-	-	-1.78
Gb_33211	-0.45	0.96	-0.08	-0.35	-0.58	-0.71	3.64	-1.17	-8.16	-3.83	-7.28	-5.17	-4.3	-1.5	-5.06	-8.63	-9.82	-0.21	-8.35	-7.06
Gb_33481	-6.12	-3.96	-4.13	-	-	-5.93	4.26	-7.24	-8.02	-5.94	-	-	-	-	-	-	-	-3.27	-0.92	-4.69
Gb_34756	-	-	-	-	-	-	3.5	-1.42	-1.06	-0.13	-	0.31	-1.74	-0.83	0.46	-	-	-	-0.33	1.39
Gb_34872	-	-	-	0.39	-3.28	-	3.5	-0.05	-1.95	-0.12	-	-	1.2	0.18	0.16	-	-0.81	-	-	-
Gb_35451	-5.56	-	-4.52	-	-	1.48	4.06	-9.15	-7.45	-	-	-7.58	-	-	-	-	-	-	-1.34	-5.9
Gb_36207	-	-	-	-4.62	-	-1.28	4.28	-7.46	-	-	-	-	-	-	-	-	-	-5.4	-3.34	-
Gb_36425	-4.61	-	-0.1	-	-	0.33	4.01	-4.8	-4.25	-2.87	-	-3.52	-3.89	-3.52	-	-	-	-	-	0.19
Gb_36982	-2.84	-0.78	-0.26	-0.24	-	0.86	3.88	-1.97	-3.51	-	-	-3.75	-3.12	-	-2.17	-	-	-2.13	-3.56	-
Gb_38021	-4.91	-	-	-2.31	-2.94	1.4	4.02	-4.45	-5.59	-	-1.48	-5.99	-	-	-	-	-	-3.18	-3.49	-2.65
Gb_38811	-	-	-	-	-	1.26	4.13	-7.2	-	-	-	-	-	-	-	-	-	-	-3.48	-
Gb_38830	-2.62	-1.79	-1.87	-3.06	-3.02	1.55	4.01	-8.49	-7.61	-	-	-	-	-	-	-	-5.65	-	-7.4	-
Gb_39045	-	-	-	-	-	1.93	4.0	-8.31	-	-4.79	-	-7.37	-	-	-	-5.28	-4.25	-	-3.61	-4.86
Gb_40109	-2.59	-3.77	-2.06	-3.23	-3.31	-4.59	3.79	-1.79	-1.92	-1.74	-2.17	-1.4	-2.48	-1.71	-2.06	0.95	-0.03	-2.5	-3.01	-5.02
Gb_40342	-	-3.65	-	-	-	1.37	4.09	-6.34	-6.4	-	-3.85	-6.59	-	-6.2	-4.89	-	-	-	-2.22	-
Gb_40470	-6.8	-7.17	-4.71	-5.82	-6.35	0.35	4.21	-7.38	-8.5	-9.16	-7.97	-6.55	-7.28	-7.75	-6.61	-6.63	-8.08	-5.83	-3.64	-5.97
Gb_40498	-7.04	-	-6.07	-4.37	-	-3.8	4.31	-10.21	-	-	-	-	-7.46	-	-	-	-	-	-5.53	-6.16
Gb_40932	-	-	-	-	-	-	4.32	-3.51	-	-	-	-	-	-	-	-	-	-	-	-
Gb_41038	-7.47	-6.94	-8.1	-	-	-2.18	4.3	-10.74	-7.71	-6.86	-	-	-	-	-	-	-	-	-	-3.4
Gb_41716	-	-	-	-	-	-0.48	4.27	-	-	-4.31	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.