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Heatmap: Cluster_195 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.6 -3.13 -3.33 -1.81 -0.33 0.29 -0.61 -0.42 0.08 0.56 0.21 -0.05 -3.05 - -1.5 - -0.88 -1.36 1.52 - - 2.86 -1.81 -1.04 2.77 -1.31 -1.69 -0.67 -0.79 -0.53 -1.31 -0.72
0.1 -0.03 -0.4 -0.31 -0.1 -0.07 -0.21 -0.15 0.15 0.1 0.04 0.08 -1.0 0.01 -1.21 -0.78 -0.49 -0.38 -0.29 0.35 0.12 1.45 -0.61 -0.85 1.48 -0.54 -0.19 -0.53 -0.16 -0.38 0.58 0.17
-3.76 1.48 0.11 -1.24 0.09 0.18 -0.8 -0.1 -0.17 -2.1 0.45 -1.98 -2.73 -2.02 -2.28 -2.83 -0.97 -4.52 -2.17 1.07 1.46 1.42 -1.26 -1.2 3.29 - -1.49 -2.11 -2.25 -1.66 -2.2 -2.74
-0.64 -0.53 -0.7 -0.26 -0.97 -0.18 -0.49 -0.27 -0.65 -0.47 -0.76 -0.56 -0.02 -0.4 -0.02 0.32 0.02 -0.08 0.51 -0.13 1.07 1.68 0.02 0.12 1.23 -0.34 -0.32 -0.29 0.11 0.05 -0.89 -0.8
-0.12 -0.31 -0.44 -0.1 -0.39 0.04 0.07 -0.11 -0.22 -0.29 -0.19 -0.22 -0.45 -0.81 0.4 -0.21 -0.13 -0.37 0.47 -0.55 0.31 1.27 -0.23 -0.09 0.69 0.39 0.3 0.04 -0.23 -0.26 -0.32 0.1
-2.19 -1.3 0.7 -3.18 0.38 -0.02 -0.46 - -0.46 -1.08 -2.3 -0.4 - -1.38 -0.38 - - 0.6 - 1.79 1.51 2.62 - - 2.36 0.79 -0.13 0.62 - - - -
-0.2 -0.27 0.01 0.02 -0.03 -0.09 0.01 -0.14 -0.16 -0.25 -0.21 -0.51 0.05 -0.21 0.0 0.28 0.12 -0.39 0.23 -0.22 -0.26 1.17 0.19 0.07 -0.09 0.55 -0.12 0.02 -0.16 -0.17 -0.15 -0.23
-0.36 -0.68 0.05 -0.67 -0.36 -0.12 0.21 0.03 -0.54 -0.12 0.11 0.09 -0.73 -2.2 -3.59 -1.35 -1.0 0.77 -0.43 -6.26 0.65 1.43 -0.53 -0.44 1.86 0.81 0.6 0.78 -0.99 -1.03 -0.1 -0.29
-0.22 -0.46 -0.56 -0.34 -1.0 -0.32 -0.86 -0.57 -0.44 -0.55 -0.49 -0.23 0.63 0.02 0.51 0.82 -0.88 -0.26 0.08 0.59 -0.45 1.26 -0.77 -0.39 1.41 0.36 -0.01 -0.39 -0.96 -0.57 0.26 0.25
-0.13 0.17 0.19 -0.14 0.04 -0.03 -0.04 -0.13 -0.02 -0.15 -0.17 -0.6 0.35 0.8 -0.25 0.34 -0.11 0.39 -0.4 -2.24 0.68 0.06 0.52 0.5 0.89 -0.81 -0.5 -0.85 -0.28 -0.16 -0.53 -0.61
-1.5 -1.69 -0.72 -3.41 -3.82 -1.74 -0.67 -1.07 -3.77 -1.75 -1.76 -3.2 -1.71 -1.71 -0.38 -1.42 -2.23 -3.25 2.99 -4.35 0.77 2.99 -1.25 -1.98 2.26 -3.7 0.28 0.12 -1.73 -2.08 -2.37 -3.18
- - - -1.35 - - - - -1.0 - - -1.8 - 1.03 -0.81 - - 1.74 - 0.44 -0.37 2.48 0.82 0.93 1.04 1.88 0.9 2.35 - -1.86 -1.89 -1.95
-0.25 -0.52 -0.4 -0.57 0.33 0.2 -0.28 0.01 -0.45 -0.59 -0.45 -0.4 -1.4 -0.25 0.66 -1.53 -1.38 -0.43 -0.78 0.03 -0.18 1.9 -1.41 -1.19 2.29 0.19 0.8 0.35 -1.09 -1.25 -1.74 -1.55
-0.35 -0.41 0.1 -0.25 0.28 0.28 -0.17 0.16 -0.05 -0.39 -0.35 -0.38 0.63 0.07 0.86 0.27 -0.32 0.25 0.63 0.29 -1.8 -0.17 0.61 0.68 0.56 -1.24 -0.85 -0.62 -0.38 0.15 -0.59 -1.03
-1.24 -2.29 -1.82 -0.55 -0.05 -0.78 -0.65 -1.46 -1.77 -2.76 -1.22 -2.3 -2.42 -1.86 -2.21 -1.7 -1.63 -0.35 -1.29 0.32 0.57 2.79 -1.54 -2.19 2.28 1.31 1.55 1.55 -1.59 -1.26 -3.06 -4.44
-0.08 0.05 -0.26 0.01 -0.2 0.25 -0.41 -0.02 -0.31 -0.2 -0.26 -0.3 -0.05 0.38 0.73 -0.1 -0.47 -1.56 0.39 0.01 0.31 0.3 -0.19 -0.23 1.46 -0.28 0.21 0.08 -0.49 -0.6 -0.45 -0.45
-0.45 -0.28 -0.22 -0.35 -1.1 -0.82 -1.67 -0.56 -0.71 0.63 -2.08 -1.89 0.42 0.73 0.36 0.94 -1.63 -1.82 2.87 -0.99 -2.22 1.25 -3.43 -2.86 1.56 -0.47 0.1 -0.29 -2.51 -2.47 -1.7 -1.26
-0.76 0.26 0.05 0.12 0.1 -0.3 -0.58 0.29 -0.39 -0.13 -0.72 -0.97 -0.49 0.01 0.02 -0.21 -0.66 0.14 0.07 -0.1 -0.65 2.22 0.09 -0.22 0.05 -0.16 0.71 0.73 -1.14 -1.34 -1.1 -1.12
-1.04 -1.21 -0.55 -0.61 -0.22 -1.1 0.55 -0.66 0.44 0.34 0.2 -0.27 -2.7 -1.01 -1.08 -1.44 -0.2 -4.67 -0.17 -6.03 -0.1 2.24 -0.65 -0.32 1.56 0.17 0.85 0.15 -0.08 -0.29 0.21 0.51
-0.55 -0.58 -0.45 -0.38 -0.29 -0.03 0.22 0.37 0.56 0.43 0.13 -0.21 -0.28 -0.61 0.82 -0.43 -0.97 -1.03 -0.2 -0.77 0.92 0.89 -0.48 -0.32 1.32 0.15 -0.03 0.27 -0.54 -0.28 -1.08 -0.68
-1.11 -0.84 -0.65 -0.27 0.2 0.22 0.61 0.46 0.24 -0.01 -0.59 -0.79 -0.36 -0.92 1.4 -0.43 -0.84 -1.06 -0.25 -0.72 1.43 1.14 -0.3 -0.19 0.92 -0.37 0.06 0.35 -0.59 -0.34 -1.58 -1.58
0.16 -0.06 0.1 -0.2 -0.67 -0.26 0.03 0.04 -0.03 0.26 0.13 0.0 -0.79 -0.59 -0.52 -0.45 -0.81 -1.07 0.05 -2.54 1.47 1.06 -0.69 -0.57 1.66 0.08 0.32 0.4 -0.81 -0.57 -0.92 -0.8
-0.56 - -1.85 -0.13 -1.6 -1.52 -0.62 -1.84 -0.83 -0.07 0.99 - -0.33 - -2.13 -1.33 -1.49 1.17 - 0.91 1.06 2.22 - -1.56 2.02 0.59 1.88 0.8 -1.62 - -0.51 -
-0.02 - - - - - 1.78 0.62 - 0.66 - - - - - - - - 2.44 - - 4.1 - - - - - - 0.9 - - -
-0.14 -0.36 0.27 -0.08 -1.07 0.34 -0.01 0.84 0.15 0.05 -0.51 -0.18 -0.96 -1.13 -0.59 -0.74 -1.59 - -1.39 0.76 1.79 2.44 -1.57 -0.75 1.58 -0.08 -0.82 -1.58 -2.63 -2.2 -2.77 -3.41
-0.88 -0.27 -1.16 -0.66 0.16 -0.22 0.02 0.13 -0.3 -0.27 -1.13 -0.95 -1.53 -2.66 0.11 -0.5 0.03 -2.47 0.3 0.3 -1.69 1.69 0.37 -0.34 1.8 0.39 0.57 0.95 -0.1 -0.37 -0.41 -0.82
-0.44 -0.29 -0.15 -0.07 0.36 0.24 -0.08 -0.16 0.04 -0.03 -0.0 -0.45 -1.24 -1.2 -0.37 0.05 0.15 -0.3 0.59 -0.64 0.74 0.61 -1.33 -0.87 1.49 0.12 0.09 -0.02 -0.28 0.1 -0.03 -0.19
0.1 -0.47 0.42 0.17 0.52 0.25 0.4 0.53 -0.59 0.27 0.41 0.03 -0.74 -1.79 -2.13 -0.18 -1.18 -0.23 -0.35 0.16 1.31 1.18 -0.97 -0.29 1.69 -0.23 -1.06 -0.65 -1.26 -1.03 -1.58 -1.23
0.02 -0.18 -0.03 -0.14 0.08 0.21 -0.55 -0.53 -0.81 -0.28 -0.61 -0.46 -0.04 0.53 1.1 0.39 -0.52 -0.53 -0.22 0.43 0.52 1.81 -0.65 -0.34 1.2 -1.64 -1.36 -0.66 -0.46 -0.46 -1.13 -1.16
1.1 -0.45 - - - - - - - 0.89 -0.22 1.15 -0.19 - 0.58 - -0.31 0.36 1.27 - 2.04 2.88 - - - - 0.92 - -0.41 0.7 -0.33 -0.4
-1.42 -0.23 -1.15 -1.77 -1.31 -1.71 -2.91 -1.73 -2.06 -0.64 -0.78 -0.92 0.46 -4.09 -2.34 0.27 0.28 0.94 0.36 -0.34 1.77 2.4 0.06 0.55 1.75 -2.43 - - 0.22 0.28 0.09 -0.62
-1.19 -1.23 -2.0 -0.75 -0.84 -0.25 -0.21 -0.43 -0.36 -0.21 -0.86 -0.56 -1.53 -1.35 -0.78 -1.18 -1.03 -0.51 -0.68 -0.56 1.55 2.33 -0.55 -0.34 2.26 0.01 0.59 -0.1 -0.88 -0.68 -0.63 -0.59
-0.41 -0.85 -1.87 -0.23 -1.45 -0.54 -0.96 -0.11 -0.55 -0.85 -0.43 -0.32 -1.43 -2.1 -1.6 -0.9 -1.26 -2.19 -0.81 0.79 -0.3 3.14 -0.83 -1.24 2.78 -1.86 -2.57 -2.04 -1.93 -1.79 -0.8 -0.86
-0.59 -0.41 -0.66 0.57 0.29 -0.34 0.09 0.29 -0.19 0.36 -0.17 -0.11 -0.25 -0.77 -0.33 -0.44 0.04 -2.48 -0.18 -1.32 -0.29 1.53 -0.03 -1.23 0.84 -0.34 0.71 0.29 -0.23 0.27 0.24 -0.05
-1.24 0.93 -2.97 0.66 0.48 0.09 0.8 -19.42 1.38 - -1.35 -14.6 -1.57 -3.19 -3.53 -20.02 0.19 - 0.49 -0.1 -2.41 1.89 - -1.67 3.3 - 1.42 -10.99 - -21.37 - -16.65
-0.57 -0.24 -0.26 -0.24 -0.39 -0.19 -0.15 -0.18 -0.48 -0.02 -0.43 -0.53 0.02 0.1 0.43 0.24 -0.43 -0.84 0.27 0.38 0.56 1.3 -0.08 0.19 1.53 -0.3 -0.25 -0.2 -0.61 -0.36 -1.19 -0.94
-0.65 0.56 -0.83 -0.46 0.66 -0.26 0.25 -0.04 -0.42 -0.1 0.74 -1.03 -1.89 0.44 0.66 -1.84 -2.04 -1.39 -1.11 1.32 1.28 1.78 -2.04 -3.15 1.02 0.96 0.35 0.08 - -1.37 -2.75 -3.83
- - - - - 1.66 - - - - - - - - - - - - -21.31 -12.05 - 3.18 -17.88 - 4.26 - - - - -0.62 - -
-0.28 -0.34 -0.46 -0.2 -0.08 0.11 0.25 0.14 0.46 0.34 -0.06 0.09 -1.01 -1.51 0.2 -0.68 -0.66 -1.19 -0.1 0.13 1.17 0.99 -0.31 -0.03 1.47 -0.71 -0.55 -0.53 -0.28 -0.29 -0.47 -0.07
-0.69 0.11 -0.97 0.12 -0.48 -0.25 -0.27 -0.59 -0.26 -1.04 -0.68 -0.85 -1.0 -1.83 0.81 0.47 -0.38 0.81 0.6 0.62 0.94 2.29 -0.89 -1.98 0.95 -0.28 -1.07 -1.36 -0.64 0.26 -1.38 -2.18
0.26 -0.2 0.25 -0.21 0.57 0.31 0.13 0.89 -0.02 0.42 0.14 0.3 0.22 -1.21 -0.92 -0.01 -0.64 -1.76 -0.48 -0.09 0.51 0.43 -0.59 -0.27 -0.15 0.49 0.28 0.1 -0.59 -1.36 -0.37 0.21
-0.79 -0.44 -0.11 -0.38 0.03 0.25 -0.21 -0.19 0.08 -0.28 -0.87 -0.6 -0.25 -0.87 0.51 -0.59 -0.34 -0.0 -0.1 -1.06 0.8 1.56 -0.5 -0.4 1.43 -0.29 0.43 0.67 -0.8 -0.29 -0.74 -0.6
-0.88 -0.41 -0.84 -0.48 -0.2 -0.13 -0.2 0.12 -0.47 -0.73 -0.62 -1.46 -0.78 -1.79 -0.33 -0.65 -0.78 -0.93 -0.11 0.79 0.54 2.2 -0.42 -0.23 1.86 0.31 0.63 0.33 -0.61 -0.44 -2.08 -1.6
-0.2 -0.22 -0.1 -0.01 0.02 -0.12 -0.23 -0.37 -0.37 -0.31 -0.34 -0.39 0.48 0.56 0.27 0.39 -0.34 -0.42 0.06 0.22 0.26 0.04 0.14 0.36 0.98 -0.75 -0.64 -0.32 -0.15 0.06 -0.06 0.0
-0.92 -1.68 -1.6 -0.74 -0.99 0.96 0.18 0.26 0.51 0.15 -0.8 -0.91 -2.18 -2.62 -0.13 -1.65 -0.48 -1.12 -0.48 -0.51 0.42 2.47 -1.02 -1.4 1.75 -0.9 0.76 0.34 -0.4 -0.16 -0.42 -0.78
-0.44 -0.07 -0.28 -0.09 0.2 0.04 -0.16 -0.01 -0.1 0.1 -0.1 -0.36 0.08 0.22 0.68 -0.02 -0.9 -1.61 -0.05 -0.09 1.02 0.71 -0.35 -0.33 1.0 0.81 0.23 0.08 -0.74 -0.7 -1.55 -1.32
-0.81 -1.04 -0.73 -0.9 0.04 0.29 0.32 0.73 0.19 0.19 0.06 -0.51 -1.97 -2.86 0.02 -1.76 -0.83 -0.92 -1.27 -0.04 1.16 1.23 -1.13 -1.46 2.38 -0.87 0.52 0.07 -0.69 -0.62 -0.3 -0.5
-0.33 -0.46 -0.25 0.01 0.26 0.36 0.43 0.4 0.36 0.18 -0.04 -0.08 0.77 -0.2 0.83 -0.02 -0.74 -1.16 -0.49 -0.99 0.51 -0.06 0.07 0.12 0.5 -0.07 0.21 0.14 -0.46 -0.41 -1.13 -1.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.