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Heatmap: Cluster_129 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
34.66 30.81 24.83 22.19 23.88 21.53 21.38 30.04 36.75 40.31 44.53 53.23 17.68 10.01 17.25 23.56 17.3 13.6 34.77 7.75 33.88 22.42 22.1 26.99 31.83 30.02 27.82 27.3 36.65 38.81 22.57 21.94
116.01 103.72 78.12 75.37 71.4 69.83 66.53 65.61 70.39 79.41 82.98 94.17 18.03 33.14 20.86 39.61 67.53 60.17 54.91 47.56 94.26 13.2 54.11 45.78 71.16 32.92 37.03 44.04 66.11 68.97 80.81 88.49
20.63 30.25 30.58 24.75 19.36 18.63 21.32 21.7 22.12 27.9 27.01 32.46 4.66 2.05 1.4 6.89 16.78 14.63 19.15 1.03 20.18 0.0 5.11 3.24 8.9 9.06 12.53 13.93 15.28 14.31 9.89 4.29
12.29 7.99 5.23 5.59 4.95 4.81 5.39 7.32 9.85 10.17 11.84 12.37 4.04 2.63 3.14 6.77 2.9 0.91 7.84 9.47 7.14 0.12 3.71 4.58 9.84 21.12 9.63 7.25 4.47 5.04 7.89 10.95
11.98 6.56 3.3 3.65 2.3 3.18 2.53 3.37 3.92 5.23 7.66 12.03 0.59 0.54 1.82 2.79 2.67 2.01 6.24 0.0 4.11 3.09 1.32 0.81 6.1 9.06 8.21 6.97 5.22 6.13 2.87 4.72
113.27 99.95 83.44 81.1 85.33 76.73 85.44 92.41 97.74 116.48 105.18 130.18 67.11 45.67 33.88 77.4 66.8 77.08 108.96 123.84 222.61 99.27 74.15 69.91 136.56 89.63 29.04 35.42 79.03 83.46 43.45 41.8
3.69 2.99 2.73 2.97 0.49 1.81 1.79 1.22 2.06 3.12 2.6 3.79 2.45 2.42 1.84 3.4 2.2 2.52 2.7 6.14 0.48 2.22 2.68 2.79 1.09 1.68 0.91 3.2 1.58 1.61 1.16 0.96
89.79 85.12 70.36 54.72 44.62 39.75 40.3 41.83 48.59 50.45 58.43 65.18 35.92 31.37 23.88 35.45 35.69 39.02 53.41 1.01 40.76 2.52 21.8 22.86 20.47 46.5 43.46 45.98 38.83 36.95 33.28 34.2
69.94 20.93 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.91 0.21 0.0 0.36 0.2 2.48 1.18 9.39 0.03 23.95 0.02 1.78 1.5 4.54 0.0 4.42 3.2 6.38 5.4 8.18 5.04
42.73 39.3 41.85 41.25 44.18 56.23 59.03 70.35 59.04 60.95 55.71 54.8 32.66 51.0 20.4 42.25 33.25 30.34 42.98 62.17 133.86 25.15 28.95 32.55 91.73 34.35 34.0 32.48 45.45 47.56 75.38 65.39
183.1 194.87 181.45 138.74 117.84 100.97 97.02 97.42 113.81 131.64 153.9 190.51 58.71 83.27 59.19 66.01 69.85 60.27 60.96 31.85 116.39 19.13 62.65 47.47 28.73 119.36 70.94 82.73 91.59 89.76 80.92 77.59
64.98 34.94 23.6 25.92 24.81 23.72 24.4 33.74 39.0 41.48 52.39 68.91 18.65 25.81 17.98 23.05 26.13 29.91 33.58 9.72 47.15 11.65 21.37 19.09 49.47 70.53 42.49 40.76 43.41 43.27 48.74 57.73
99.82 95.38 85.37 83.3 86.75 71.55 77.14 88.39 100.31 94.35 97.44 113.61 3.74 24.14 16.57 31.56 68.32 40.36 91.08 30.56 94.52 17.86 28.98 26.74 126.48 97.14 77.25 82.4 77.62 77.85 66.56 59.57
292.94 70.44 37.33 39.6 32.27 31.66 37.08 37.41 37.7 62.56 110.88 227.69 34.2 28.06 29.96 36.11 25.85 41.95 103.44 150.62 127.08 68.14 41.31 33.51 31.4 33.68 19.17 18.34 83.0 84.61 77.19 60.7
200.63 154.79 141.3 160.37 152.91 155.19 164.52 148.89 220.26 230.28 191.7 264.09 8.27 40.36 17.34 18.03 189.55 128.34 47.32 207.25 390.31 41.39 75.04 48.18 272.66 133.99 123.22 107.48 166.98 143.96 177.16 182.87
222.4 193.31 178.21 180.38 178.32 192.26 209.26 216.43 232.34 215.08 230.1 230.46 18.44 50.39 22.79 30.27 160.12 153.1 75.42 211.45 345.98 153.59 85.74 77.38 180.32 202.17 213.83 218.82 149.45 137.1 130.96 133.68
205.46 177.85 152.33 152.38 149.44 133.81 154.22 218.04 210.1 228.43 214.7 247.79 6.26 14.34 2.54 15.69 97.12 69.17 78.12 51.26 181.82 22.8 66.36 42.24 264.6 87.4 99.65 104.38 122.63 111.89 64.65 50.39
7263.89 6135.98 5354.37 5108.4 4352.45 4241.02 3927.8 4093.55 4670.92 4960.82 5716.6 7186.99 70.77 751.3 102.75 558.4 4287.01 4186.18 1595.37 7951.71 18900.7 706.55 3031.34 2390.32 13681.05 4426.33 3655.01 3804.69 3745.88 3304.72 3921.12 4174.12
36.74 33.35 29.61 25.28 24.43 26.27 42.65 31.69 36.61 36.08 37.25 36.43 4.01 14.6 15.9 9.02 25.91 16.97 14.6 15.88 34.87 17.8 7.81 8.8 30.47 37.12 18.92 22.75 25.02 28.91 13.31 14.07
50.31 23.25 17.93 12.65 9.42 7.38 6.97 8.79 12.58 20.18 27.13 38.65 20.42 3.85 1.03 15.33 12.26 20.89 13.26 9.21 32.01 2.96 15.75 16.7 21.68 15.25 6.19 6.46 15.37 18.09 14.99 13.37
14.14 10.75 10.05 12.99 10.93 10.74 12.32 9.78 13.57 13.52 14.12 15.84 10.59 6.92 5.75 10.78 8.01 6.12 10.42 10.85 4.34 15.34 11.11 8.68 23.09 16.08 8.56 9.56 8.66 9.08 7.05 6.28
55.11 32.55 28.46 26.34 28.54 29.81 33.05 43.83 47.85 50.0 53.98 48.01 7.77 11.66 7.16 23.26 25.71 27.71 50.15 24.0 29.49 20.79 28.84 28.8 33.5 53.0 26.41 26.43 38.13 36.68 28.33 27.51
202.2 230.47 191.44 175.82 171.81 143.55 143.74 128.38 140.48 166.43 157.46 187.73 60.37 74.83 30.13 72.7 67.16 80.64 111.28 59.28 137.84 30.37 78.6 57.28 113.66 84.67 70.72 76.03 108.95 114.23 85.84 94.91
142.45 121.27 132.75 123.18 122.3 143.49 125.38 119.02 131.13 127.2 126.44 128.6 67.38 91.72 75.36 67.81 135.06 152.35 96.87 123.06 233.47 84.84 106.07 92.4 219.58 62.28 96.09 122.51 129.46 133.47 81.81 82.12
441.84 368.39 276.9 218.64 161.55 148.47 171.48 249.08 295.48 354.25 391.9 483.58 0.73 14.82 0.11 50.54 263.35 179.11 209.44 187.2 326.43 20.17 160.61 141.73 466.36 237.8 94.28 110.94 402.92 379.73 360.26 326.07
114.15 76.42 67.97 69.3 69.38 63.37 68.36 80.91 101.26 118.79 118.03 133.88 10.29 7.91 6.8 22.12 59.43 48.47 39.25 65.78 124.1 40.02 42.16 35.12 102.83 119.57 56.66 60.63 75.53 73.43 62.2 70.52
6.88 3.97 3.84 5.15 3.96 4.55 4.17 5.38 5.51 6.26 5.39 6.97 0.92 1.29 0.65 1.78 5.06 1.9 7.75 0.78 6.98 0.0 3.92 3.66 5.57 7.28 8.79 7.88 4.84 5.85 5.29 7.52
0.32 0.17 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0
10.89 6.58 1.73 1.52 0.64 0.56 0.55 0.72 0.95 0.91 2.3 10.21 1.99 1.53 4.14 3.44 2.06 1.42 3.12 16.56 2.23 0.51 1.04 0.79 0.28 0.56 0.82 0.96 2.05 2.09 1.78 2.12
6.34 4.75 2.95 2.08 0.69 1.99 1.03 2.98 2.34 2.11 6.67 7.88 0.12 0.87 3.46 0.4 1.54 1.66 6.86 10.86 3.55 3.29 0.73 0.18 4.98 2.41 2.94 4.58 0.76 0.79 1.09 0.61
158.48 119.19 79.14 53.62 39.68 23.28 16.32 18.46 19.75 29.0 55.21 113.38 45.51 35.74 9.19 63.41 56.12 35.58 60.18 88.13 136.44 33.39 51.28 53.0 101.81 70.9 52.06 59.97 58.4 59.34 44.26 40.67
9.31 1.12 1.31 0.74 0.84 0.4 0.99 0.54 1.04 2.56 5.54 7.99 2.76 1.71 0.76 1.42 0.0 0.0 1.31 5.48 5.02 0.77 0.05 0.55 1.89 13.72 1.11 0.2 0.2 0.25 1.03 0.28
38.26 21.92 19.36 15.1 14.73 15.35 22.87 27.27 29.5 34.89 34.1 40.85 0.54 1.55 2.81 1.45 13.77 14.0 8.61 5.58 33.3 0.49 8.35 5.17 42.8 16.74 13.98 16.68 22.5 19.99 10.73 8.26
3.43 0.73 1.93 0.27 0.42 0.0 0.0 0.0 0.52 0.29 2.86 4.07 0.57 0.18 0.08 0.15 0.0 0.0 0.1 5.28 0.0 0.0 0.0 0.0 0.0 5.71 0.96 0.43 0.0 0.0 0.0 0.0
7.73 4.53 2.66 3.41 4.57 2.72 2.44 2.97 3.28 3.46 4.57 5.22 0.07 0.53 1.17 0.47 1.66 0.27 2.53 1.18 2.79 1.61 0.81 2.33 7.19 2.97 3.1 3.79 4.17 3.88 2.7 1.71
125.9 79.9 76.39 64.98 50.58 56.64 66.25 94.2 93.29 108.38 131.81 141.97 59.25 59.19 52.37 65.63 52.85 103.32 88.12 137.59 238.99 165.67 73.65 89.2 82.53 208.14 84.96 69.64 90.06 88.56 92.99 118.72
13.37 12.08 12.33 9.25 5.89 5.45 4.21 7.21 8.59 10.93 14.86 22.0 6.91 2.38 1.62 8.46 8.56 2.92 10.99 5.72 9.89 0.35 12.6 14.06 16.69 16.41 8.64 8.26 13.62 12.36 9.29 7.54
5.25 6.61 6.59 6.84 5.16 4.58 5.34 6.03 6.05 6.58 8.23 9.48 3.73 1.39 0.95 2.35 5.7 2.12 5.32 4.31 7.08 0.54 6.23 6.26 13.94 7.02 8.14 8.62 6.01 5.74 1.63 1.15
12.58 7.03 4.94 3.23 3.09 3.79 3.83 6.09 6.93 6.87 9.51 13.59 0.32 0.25 0.45 0.82 4.29 5.6 2.49 4.31 9.88 1.26 3.09 1.83 13.76 2.89 6.11 5.54 5.9 6.06 4.51 4.7
79.19 78.38 45.47 32.55 20.02 10.3 11.77 10.25 16.6 25.75 39.14 59.56 0.06 0.57 0.07 1.81 42.2 81.4 42.55 44.95 92.6 0.0 18.38 9.81 88.3 19.61 16.45 19.42 65.87 58.55 26.97 25.01
109.56 98.79 138.35 149.8 144.64 140.35 167.97 192.93 190.28 201.87 167.69 141.6 100.2 42.49 18.36 94.15 145.06 78.12 105.41 197.16 400.81 43.84 129.64 145.62 332.17 159.86 83.74 100.01 158.52 149.9 100.91 99.07
56.33 39.61 33.09 32.08 35.39 37.01 37.17 34.26 44.0 47.89 43.84 49.21 9.06 10.76 15.37 14.92 24.06 20.65 29.74 4.09 21.02 1.87 20.68 21.52 7.83 13.3 15.44 15.49 29.75 30.4 33.37 31.91
346.46 289.15 195.78 152.03 134.71 107.49 101.64 106.05 132.18 151.91 170.34 231.7 20.46 58.76 43.03 69.73 154.94 143.73 156.05 381.25 528.98 71.92 115.11 113.81 294.43 152.02 109.2 119.19 169.67 164.3 170.43 146.53
72.45 81.81 79.23 78.76 83.67 93.97 73.57 50.36 51.69 51.58 50.6 52.43 19.47 52.65 64.31 30.0 89.73 97.1 66.79 88.07 119.64 63.34 53.53 35.96 83.07 18.38 52.24 58.67 63.88 63.93 47.02 55.02
16.53 14.41 15.48 17.2 16.25 15.97 13.75 16.57 19.41 19.22 18.8 15.85 24.66 12.18 6.63 23.37 14.86 10.33 26.53 22.87 27.52 22.66 10.96 14.31 18.89 28.91 8.96 8.78 14.39 13.59 10.84 8.98
37.02 33.63 25.38 22.89 20.39 26.25 18.15 22.26 25.99 23.58 22.65 31.04 5.19 7.75 3.9 6.56 28.07 19.14 17.88 22.75 50.7 13.35 16.6 11.74 23.91 15.64 25.4 25.61 22.85 22.11 12.79 12.49
79.87 26.02 13.19 11.21 8.62 5.25 5.08 4.47 6.95 17.38 7.68 27.38 14.37 2.48 2.44 31.17 11.7 16.91 8.86 10.33 10.54 4.62 9.49 6.18 143.62 6.23 0.0 10.81 17.3 19.03 3.18 4.47
56.25 57.57 33.32 23.76 20.69 20.42 21.51 22.83 23.53 31.7 39.18 66.42 22.6 20.69 9.25 30.99 27.9 13.8 25.61 17.07 53.64 7.06 23.31 26.37 102.41 29.8 40.32 52.36 33.17 31.89 11.1 8.33
24.96 20.23 33.68 26.81 25.46 29.77 35.33 41.7 39.6 33.3 34.45 25.23 6.51 8.68 20.71 8.94 44.12 38.06 20.39 20.34 39.63 42.88 23.66 20.9 28.98 27.18 51.18 55.72 43.66 41.96 31.46 23.66
201.48 187.77 150.53 189.43 148.9 181.4 164.85 176.73 147.81 159.02 145.15 201.14 31.51 52.18 22.11 58.5 181.02 177.27 105.05 303.11 734.64 33.16 119.3 85.47 576.99 89.37 127.22 159.69 202.09 205.82 164.11 128.02
29.76 21.52 17.13 20.19 14.33 12.96 19.16 18.06 23.99 24.78 28.6 30.63 18.21 12.08 7.92 20.03 12.78 4.16 15.77 15.07 14.81 5.18 12.55 15.65 34.67 24.08 16.84 18.83 16.89 18.1 12.94 10.54
309.8 319.66 310.38 241.71 211.06 228.92 220.96 231.42 278.32 231.19 260.0 258.08 4.44 22.39 11.44 8.0 278.55 377.71 65.59 307.33 635.71 202.58 97.2 41.46 440.72 57.76 284.1 276.01 209.29 174.96 115.34 111.22
76.96 56.58 37.96 41.03 40.13 32.18 24.24 35.58 46.1 48.61 60.17 90.49 49.98 70.18 24.73 61.89 34.96 29.37 85.2 93.7 100.72 5.84 50.45 54.03 78.2 121.01 47.71 44.08 54.18 56.99 31.72 42.79
446.68 395.4 262.89 181.22 120.21 69.78 22.94 20.44 14.51 31.17 76.01 280.1 10.43 6.64 1.23 51.88 145.81 168.69 166.68 187.56 315.94 9.33 112.39 111.48 252.25 112.75 54.49 101.26 96.59 95.74 83.74 75.68
215.71 172.63 102.62 75.3 37.25 31.13 16.05 19.66 25.66 54.52 78.23 192.63 4.72 11.97 2.83 34.11 135.11 142.47 115.67 13.92 135.5 1.23 85.97 79.71 161.25 115.93 28.29 40.97 104.38 93.5 89.22 53.8
34.33 28.3 28.66 29.79 34.67 32.62 32.97 38.96 36.54 34.43 38.52 35.2 6.53 11.12 23.52 10.98 49.41 34.66 24.07 31.73 58.21 33.68 27.32 18.95 19.33 21.49 43.9 57.69 40.94 40.47 37.26 31.08
12.51 9.83 9.74 9.01 9.41 8.07 8.1 10.82 10.26 10.41 11.1 13.46 2.09 2.78 5.17 3.2 5.57 4.88 5.57 1.81 6.96 0.19 5.53 5.62 4.89 6.37 7.45 7.47 6.68 6.83 7.88 8.19
41.16 23.48 14.48 11.21 10.07 9.34 9.5 10.1 9.75 8.85 10.55 20.92 0.17 1.84 1.11 0.54 12.39 16.24 28.3 16.53 23.41 1.6 10.61 12.08 23.16 7.58 12.36 11.43 15.8 15.88 8.67 8.1
67.24 44.9 34.59 30.77 26.86 29.58 21.99 22.14 23.37 21.35 25.88 30.85 8.05 13.82 6.32 9.83 18.13 28.72 36.46 20.48 42.83 4.85 20.54 18.79 41.5 18.17 19.79 15.4 38.55 35.94 23.08 18.72

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)