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Heatmap: Cluster_76 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.23 0.5 0.49 0.5 0.24 0.4 -0.22 -0.45 0.3 0.14 -0.07 -0.39 0.2 1.1 2.27 0.4 0.48 0.12 -1.75 -5.13 -2.37 -1.4 -0.41 -0.86 -0.97 -1.52 -1.09 -0.73 -0.49 0.01 -0.74 -1.35
0.47 0.36 0.56 0.59 0.87 0.7 0.73 0.01 0.7 0.58 0.44 0.36 -0.95 -2.63 2.02 -0.68 0.54 0.11 -0.4 -2.73 -3.2 -0.62 -0.51 -1.26 -6.51 -1.74 -1.89 -1.27 -0.33 -0.22 -0.69 -0.91
-0.24 -0.35 0.08 0.03 0.9 0.79 0.68 0.55 0.62 0.5 0.4 -0.04 -0.99 -1.41 1.86 -0.23 0.55 0.69 -0.75 -2.45 -5.5 0.26 -0.66 -1.9 - -1.77 -0.28 -1.14 0.26 0.1 -0.51 -0.99
-0.05 0.09 0.08 0.01 0.01 0.03 0.2 0.16 0.29 0.47 0.32 0.31 0.22 1.15 1.29 0.28 -0.35 -0.42 -0.27 -0.12 -0.33 -1.34 -0.13 -0.1 -1.49 -0.83 -1.35 -1.41 -0.3 -0.26 -0.23 -0.02
-0.22 0.14 0.3 0.23 0.08 0.4 0.36 -0.17 0.43 0.26 0.17 -0.24 0.34 0.75 2.01 -0.39 0.41 -0.11 -0.84 0.66 -0.94 0.54 -3.09 -2.89 -4.92 -1.69 -1.78 -0.96 -0.3 0.35 -1.09 -0.99
0.51 0.36 0.42 0.26 0.59 0.41 0.1 0.05 0.51 0.58 0.59 0.26 0.45 -0.82 2.38 0.93 -0.65 -0.56 -0.92 -0.25 -1.61 -2.43 -1.44 -0.8 -4.81 -0.74 -1.33 -0.93 -1.49 -0.95 -1.73 -1.97
0.36 0.44 0.66 0.58 0.64 0.62 0.55 0.02 0.49 0.34 0.39 0.12 -1.65 -1.19 1.65 -0.72 0.79 0.09 -1.21 -1.2 -1.75 0.05 -1.49 -1.84 -3.7 -1.3 -1.46 -0.9 0.07 0.34 -0.11 -0.19
0.26 0.34 0.26 0.33 0.28 0.43 0.37 -0.06 0.11 0.12 0.25 0.04 -0.86 -0.14 1.33 -0.48 0.62 -0.05 -0.67 0.3 -0.01 -0.65 -0.55 -0.52 -0.19 -1.16 -0.83 -0.59 -0.07 0.22 -0.54 -1.11
0.07 0.03 0.04 0.12 0.04 0.07 -0.12 -0.07 0.04 0.05 -0.19 -0.08 0.56 0.46 0.8 0.36 -0.28 -0.56 0.39 -0.45 -1.0 -0.05 0.1 0.29 -1.16 0.01 -0.3 -0.51 -0.26 -0.35 0.02 0.25
-0.04 0.18 0.32 0.3 0.21 0.18 0.26 -0.05 0.08 0.04 -0.03 -0.16 0.14 0.89 1.36 0.3 0.12 -0.37 -0.06 -0.01 -1.96 -2.0 -0.05 -0.02 -1.76 -0.41 -0.39 -0.04 -0.27 -0.07 -0.48 -0.51
0.23 0.29 0.39 0.34 0.24 0.13 0.39 0.09 0.66 0.7 0.63 0.51 -0.67 0.36 1.79 -0.55 0.33 0.35 -1.62 -1.16 -1.88 -0.13 -1.34 -0.94 -3.47 -1.08 -2.08 -1.66 -0.3 -0.04 0.02 -0.27
0.33 0.25 0.3 0.33 0.71 0.4 0.32 0.42 0.74 0.88 0.61 0.36 -0.61 -0.08 1.61 -0.33 0.07 -0.11 -0.43 -4.17 -4.08 -2.34 0.05 -0.45 -6.16 -0.75 -1.1 -1.53 -0.12 0.03 -0.69 -0.03
0.23 0.49 0.69 0.39 0.62 0.31 0.47 0.13 0.21 0.22 0.19 0.12 -0.87 0.5 2.09 0.15 0.64 -2.74 -1.06 0.19 -4.22 -4.27 -0.75 -0.88 -3.3 -0.25 -0.96 -0.55 -0.12 0.07 -1.45 -1.6
0.11 0.11 0.28 0.16 0.24 0.23 0.29 0.03 0.37 0.22 0.27 0.07 -0.57 0.66 1.41 -0.06 0.04 -0.3 -0.24 -0.44 -0.99 -0.65 -0.18 -0.45 -2.45 -0.88 -0.27 -0.37 -0.53 -0.44 0.21 0.32
0.1 0.1 0.02 0.28 0.42 0.6 0.04 0.02 0.46 0.46 0.54 0.26 -0.45 0.24 2.32 0.03 -1.19 -1.91 -2.39 0.43 -0.36 1.54 -3.12 -1.85 -0.52 -0.84 -1.71 -1.56 -1.82 -1.15 -1.99 -2.26
0.22 0.52 0.64 0.54 0.52 0.63 0.6 -0.12 0.4 0.19 0.41 0.24 -0.49 0.79 1.41 -0.02 0.12 0.18 -1.19 -0.02 -2.2 -5.44 -0.16 -0.14 -0.93 -1.35 -1.36 -1.55 -0.53 -0.44 -0.63 -0.93
-0.18 0.21 0.26 0.1 0.09 -0.13 0.21 0.19 0.3 0.5 0.31 0.01 0.32 1.36 1.59 0.49 -0.19 -0.33 0.31 0.17 -3.83 -1.05 -0.63 -0.06 -2.37 -0.52 -1.28 -1.32 -0.66 -0.48 -1.17 -0.75
0.19 -0.17 -0.19 -0.08 -0.25 -0.06 -0.3 0.16 -0.01 0.14 0.18 0.06 0.4 0.84 1.02 0.39 -0.39 -0.11 0.24 -0.15 -1.34 -0.13 0.03 0.16 -2.41 0.04 -0.38 -0.61 -0.35 -0.4 -0.01 0.39
-0.49 -0.05 0.09 0.29 0.21 0.33 0.44 0.18 0.36 0.18 0.17 -0.11 -0.79 0.64 0.98 -0.13 0.27 -0.25 -0.33 -0.2 -1.04 0.03 0.21 0.4 -1.01 -1.39 -0.64 -0.3 -0.03 0.18 -0.29 -0.54
-0.25 0.1 -0.12 0.36 0.26 0.24 0.22 -0.02 -0.02 0.18 0.42 -0.08 0.36 -0.37 1.84 0.34 0.36 1.17 -0.96 -0.85 -2.58 0.81 0.13 0.12 -4.31 -4.11 -3.92 -2.96 -0.24 -0.13 -0.38 -0.93
-0.03 0.03 0.33 0.27 0.26 0.62 0.46 0.57 0.56 0.59 0.85 0.56 -1.44 -2.32 2.0 -0.25 0.43 -0.51 0.25 -5.11 -1.27 -5.75 -1.34 -2.22 -1.91 -0.84 -1.16 -0.61 0.18 0.44 -0.37 -0.37
-0.21 0.05 0.07 0.37 0.08 -0.19 0.68 0.2 1.0 0.63 0.56 0.33 -2.68 1.51 2.79 -1.78 -0.28 -0.53 -2.6 -4.13 -2.29 -3.62 -1.45 -1.2 -0.52 -1.59 -1.74 -1.12 -0.7 -0.37 -1.27 -2.7
-0.02 -0.04 0.16 0.12 0.16 0.14 0.45 0.32 0.52 0.51 0.55 0.18 -1.59 -1.9 1.86 -0.5 0.25 -0.51 -0.51 -2.2 -3.59 -0.29 -0.81 -0.9 -2.27 0.54 -0.12 0.36 -0.01 0.08 -0.21 0.01
-0.06 -0.14 -0.18 0.0 0.16 0.38 0.45 0.71 0.68 0.41 0.48 0.09 -2.08 -0.63 1.44 -1.25 0.11 -0.01 0.0 -1.6 0.03 -1.41 -0.87 -1.43 -0.96 0.12 0.35 0.36 0.2 0.12 -0.63 -0.56
0.61 0.63 0.79 0.56 1.0 0.63 0.55 0.3 0.72 0.77 0.78 0.45 -1.61 -3.37 1.76 -0.72 0.02 -0.19 -2.15 -1.17 -2.98 -0.3 -3.59 -3.17 -5.31 -0.42 -0.78 -0.44 -0.88 -0.55 -0.36 -0.23
-0.2 0.87 0.97 0.23 -0.3 -0.38 0.65 0.2 0.21 0.46 0.2 0.36 -2.97 2.11 2.83 -1.47 -1.32 -1.79 -1.24 -4.34 -4.65 -2.54 -1.65 -2.61 -4.04 -1.41 -0.84 -0.24 -1.4 -0.55 -4.14 -2.64
0.22 0.32 0.32 0.19 0.45 0.55 0.79 -0.25 0.5 -0.06 0.12 0.13 0.57 1.02 2.02 -0.16 0.28 -1.43 -0.81 - 0.51 0.05 -3.49 -2.95 -5.54 -1.68 -1.31 -1.65 -0.25 0.23 -1.17 -1.16
-0.35 0.05 0.08 0.32 0.53 0.56 0.68 0.35 0.39 0.3 0.14 -0.15 -0.71 -0.96 1.91 -0.97 0.51 0.02 -1.17 -0.35 -1.09 0.48 -0.55 -0.86 -1.78 -1.17 -0.56 -0.22 -0.13 0.2 -0.86 -1.06
-0.04 0.07 0.31 0.23 0.38 0.45 0.5 0.24 0.7 0.57 0.64 0.24 -1.68 -2.75 1.69 -0.03 0.24 -0.08 -1.33 -0.8 -1.63 -0.26 -1.09 -1.18 -3.2 0.2 -0.99 -0.98 -0.3 0.02 0.46 0.19
-0.11 -0.1 -0.01 0.2 0.06 0.29 0.18 0.05 0.54 0.62 0.53 0.17 -0.35 -0.89 1.94 0.04 0.34 0.1 -0.11 -1.44 -3.5 -1.2 -0.8 -0.17 -6.16 -0.89 -1.44 -0.94 -0.14 0.12 0.45 0.46
-0.0 -0.15 0.24 0.61 0.36 0.41 0.5 -0.12 -0.06 0.27 0.11 0.22 -1.86 -1.83 2.13 -1.21 0.87 -0.54 0.23 -1.46 -5.45 -1.1 -0.75 -1.44 -1.12 -0.32 0.2 0.54 0.02 0.31 -0.74 -1.15
0.29 0.37 0.62 0.43 0.23 0.34 0.39 0.28 0.56 0.49 0.67 0.29 -1.65 -0.82 1.66 -0.99 -0.15 -1.37 -0.08 -0.01 -1.07 0.48 -1.07 -1.18 -1.72 -0.6 -0.62 -0.36 -0.01 -0.05 -0.95 -0.93
0.27 0.31 0.46 0.35 0.36 0.33 0.56 0.24 0.39 0.35 0.32 0.18 -0.08 0.77 2.16 -0.07 0.04 -0.73 -1.47 -2.79 -3.94 -2.29 -0.99 -0.63 -2.7 -1.11 -1.08 -0.68 -0.54 -0.34 0.17 -0.32
0.16 0.15 -0.18 0.35 0.39 -0.07 -0.0 -0.3 0.14 -0.29 -0.27 -0.57 -1.46 0.65 1.66 -0.49 0.05 -0.1 0.35 1.17 -4.17 -1.14 -1.62 -0.85 -1.25 0.51 -0.41 0.31 -0.63 0.03 0.11 -0.26
-0.09 0.11 -0.65 -0.14 -0.6 -0.17 -0.23 -0.58 -0.63 -0.63 -1.09 -0.37 -1.61 0.64 1.86 -0.76 0.18 0.93 0.83 1.05 -1.82 -3.27 -0.67 -0.93 -0.93 1.03 0.54 0.79 -0.14 -0.13 -1.89 -1.16
0.17 0.31 0.35 0.45 0.45 0.51 0.06 0.12 0.35 0.54 0.24 0.34 -0.71 1.15 2.36 0.14 -0.5 -0.68 -1.92 0.2 -5.12 -0.92 -1.65 -1.38 -1.88 -1.69 -0.65 -1.17 -0.86 -0.59 -0.9 -1.33
0.32 0.4 0.43 0.25 0.36 0.41 0.78 -0.26 0.42 -0.11 0.3 0.44 -1.0 -0.55 1.68 -0.43 0.08 -0.28 -0.67 0.75 -2.65 -0.44 -0.76 -1.11 -1.83 -0.16 -0.67 -0.24 -0.39 -0.01 -0.74 -0.7
-0.09 0.18 0.4 0.23 0.29 0.33 0.65 0.36 0.48 0.44 0.48 0.05 -0.79 0.34 1.91 -0.2 0.21 -1.01 -1.31 0.32 -0.99 -0.19 -1.25 -1.28 -2.95 -0.13 -0.94 -0.75 -0.28 -0.28 -0.89 -0.74
-0.37 -0.05 0.2 0.15 0.37 0.45 0.5 0.2 0.31 0.36 0.42 0.16 -1.34 -0.87 1.68 -0.63 -0.13 -0.73 0.29 0.27 -0.95 0.27 -2.02 -2.34 -1.7 0.21 0.39 0.37 -0.68 -0.52 -0.66 -0.18
-0.14 0.25 0.32 0.22 0.29 0.25 0.72 0.05 0.29 0.17 0.15 -0.04 -1.27 0.28 1.68 -0.42 0.43 -0.11 -0.99 0.56 -1.1 0.14 -1.25 -0.89 -2.54 -0.48 -0.55 -0.06 -0.34 0.05 -0.49 -0.89
0.55 0.46 0.46 0.37 0.32 0.52 0.73 -0.09 0.3 0.31 0.47 0.3 -0.58 -1.09 1.21 -0.29 0.28 0.02 -0.89 0.53 -1.21 0.46 -0.83 -0.92 -1.37 -1.5 -0.69 -0.54 -0.31 -0.0 -1.12 -1.21
0.17 0.61 0.34 0.5 0.15 0.4 0.16 -0.53 -0.14 -0.39 -0.25 -0.32 -0.2 0.56 1.73 0.29 0.2 -0.13 -0.46 -0.97 -0.63 0.76 -0.19 -0.16 -0.56 -1.35 -1.02 -0.95 -0.4 -0.02 -1.05 -0.97
0.58 0.48 0.57 0.15 0.46 0.25 0.41 -0.2 0.54 0.31 0.6 0.25 -2.2 -4.16 1.57 -1.9 0.98 0.03 -1.7 1.05 -0.91 1.08 -4.45 -5.91 -2.1 -2.03 -1.39 -0.85 0.2 0.43 -0.79 -1.82
0.22 0.63 0.65 0.6 0.45 0.58 0.28 -0.08 0.19 -0.22 0.09 -0.06 -0.07 1.29 2.36 0.2 0.34 -0.5 -1.26 -7.92 - -2.34 -0.03 -0.86 -1.84 -3.34 -1.46 -0.85 -0.4 -0.2 -2.05 -2.5
0.32 0.17 0.46 0.37 0.71 0.35 0.54 -0.07 0.32 0.4 0.57 -0.0 -1.3 -0.16 1.83 -0.61 0.43 0.57 -0.45 -5.18 -4.43 -0.85 -0.79 -1.3 -5.1 -0.09 -0.37 -0.31 -0.25 -0.09 -0.29 -0.39
0.29 0.06 0.15 0.22 0.2 0.18 0.34 -0.25 -0.16 0.13 -0.08 -0.23 0.01 1.62 1.39 0.72 0.66 0.6 -0.37 0.3 -2.47 -6.59 0.01 0.47 -4.08 -3.03 -2.15 -1.85 -0.62 -0.45 -0.4 -1.22
0.2 0.29 0.49 0.36 0.68 0.45 0.45 0.22 0.67 0.48 0.73 0.16 -0.94 -0.53 1.98 -0.31 0.54 0.65 -1.15 -6.72 -6.75 - -1.42 -1.87 - -0.84 -0.8 -0.54 -0.03 0.3 -0.37 -0.35
0.07 0.02 0.14 0.26 0.29 0.46 -0.1 0.23 0.1 0.09 0.07 -0.17 0.1 0.83 1.53 0.05 0.09 0.31 -0.07 -0.31 -2.77 -1.83 0.01 -0.16 -1.15 -0.95 0.04 0.12 -0.7 -0.33 -0.63 -0.82
-0.42 0.0 -0.03 0.11 -0.04 -0.07 0.23 0.64 0.73 0.89 0.78 0.27 -0.73 -0.85 2.2 0.4 -0.08 -0.49 -0.37 -2.37 -4.48 -0.39 -0.27 -1.66 -2.21 -0.14 -0.9 -0.54 -0.27 -0.11 -0.33 -0.89
0.0 0.05 0.15 0.49 0.46 0.47 0.42 0.38 0.71 0.38 0.7 0.17 -0.79 0.48 1.92 -0.45 -0.32 -1.87 -2.75 1.1 -1.72 0.95 -2.63 -2.88 -6.26 -0.13 -0.75 -0.68 -1.14 -1.19 -1.09 -1.0
0.85 0.56 0.12 0.28 0.16 0.12 0.17 0.14 0.72 0.54 0.69 0.61 -1.83 -1.07 1.56 -1.0 0.28 -0.29 -0.39 0.48 -1.63 -1.84 -0.69 -1.06 -0.23 -0.88 -0.8 -0.28 -0.05 0.04 -1.12 -1.37
0.45 0.11 0.11 0.04 0.11 0.01 0.23 0.3 0.62 0.75 0.77 0.68 -0.59 -0.23 1.46 -0.37 0.16 -0.53 -0.53 0.12 -1.52 -0.43 -2.11 -1.93 -0.77 -0.3 -0.2 0.01 -0.22 -0.03 -0.72 -0.97
-0.02 -0.13 0.08 0.08 0.08 0.42 0.34 0.16 0.45 0.55 0.05 -0.05 -0.27 -0.19 0.92 -0.15 -0.26 -0.47 -0.28 -0.67 -0.48 -0.21 -0.04 -0.02 -0.43 0.0 0.33 0.31 -0.33 -0.25 -0.48 -0.47
-0.38 -0.31 -0.23 -0.17 -0.05 -0.2 0.36 0.4 0.57 0.57 0.55 0.43 -0.6 -0.44 1.96 -0.15 -0.27 -0.3 0.03 -1.39 -4.02 -5.36 -0.95 -0.98 -2.74 0.64 0.33 0.4 0.07 -0.04 -0.23 -0.06
-0.27 0.18 0.47 0.32 0.3 0.61 0.78 0.06 0.43 0.31 0.13 0.03 -1.46 0.53 1.54 -0.29 0.01 -0.07 -1.4 0.42 -1.85 -0.59 0.09 0.49 -3.66 -1.59 -2.03 -1.51 -0.12 0.29 -0.39 -0.64
-0.71 -0.35 0.19 0.48 0.54 0.59 1.09 -0.13 0.08 -0.17 -0.25 -0.49 -1.48 0.15 2.24 -0.41 0.3 -0.7 -0.72 0.09 -1.58 0.4 0.09 0.33 -1.63 -1.79 -1.04 -1.14 -0.09 -0.21 -1.38 -1.51
0.31 0.76 0.56 0.53 0.47 0.61 0.12 -0.54 0.02 -0.22 -0.14 -0.14 0.33 -0.74 1.7 -0.26 0.82 0.24 -1.21 0.49 -0.08 -2.38 -0.33 -1.01 -0.44 -3.47 -1.38 -0.73 -0.27 0.17 -1.15 -1.34
0.39 0.0 -0.24 0.03 0.22 0.11 0.23 0.27 0.69 0.51 0.67 0.54 -1.66 -0.98 1.62 -1.25 0.07 -0.42 -1.5 -0.92 -1.66 -0.08 -1.08 -1.31 -1.33 0.12 0.36 0.14 -0.32 -0.21 0.07 0.51
0.29 0.27 0.52 0.45 0.5 0.61 0.61 0.36 0.81 0.74 0.64 0.39 -1.37 0.13 1.9 -0.82 0.11 -0.69 -0.98 -2.12 -5.22 -1.86 -1.91 -2.01 -4.71 -1.57 -0.86 -0.61 -0.29 0.01 0.24 0.14
0.15 0.18 0.28 0.32 0.33 0.21 0.53 -0.19 0.39 0.28 0.25 0.21 -0.92 -1.71 1.07 -0.81 0.82 0.48 -1.11 0.71 0.02 -0.43 -1.27 -1.76 0.02 -0.75 -1.0 -0.66 0.38 0.26 -0.57 -0.91

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.