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Heatmap: Cluster_109 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.2 -0.4 0.26 0.04 0.19 0.19 -0.06 0.22 -0.41 0.06 -0.07 -0.47 0.49 -0.24 1.13 0.34 -0.42 -0.37 0.44 1.09 -1.44 1.32 -0.51 -0.1 -2.4 -1.5 -1.4 -1.4 -0.23 0.15 -0.44 0.06
0.54 0.27 0.32 0.11 0.49 0.56 0.66 0.6 0.66 0.31 0.12 0.21 -0.72 -0.83 0.23 -0.74 -0.53 -1.18 -0.37 0.2 -0.46 0.82 -0.51 -0.5 0.02 -0.4 -0.24 -0.55 -0.43 -0.29 -0.75 -0.69
0.13 0.64 0.6 0.59 0.2 0.37 0.3 0.12 0.35 0.37 0.46 0.43 -1.13 -0.37 1.17 -0.63 -0.58 -0.37 -2.08 0.01 0.44 -0.63 -0.88 -0.6 -3.06 0.08 -0.02 0.18 -1.07 -0.66 0.1 -0.35
-0.06 0.14 -0.31 -0.01 0.13 0.24 0.31 0.29 0.26 0.39 0.25 0.09 -0.02 -0.39 0.3 -0.02 -0.38 -0.19 0.35 -0.63 -2.22 -1.13 -0.18 -0.02 -0.22 0.57 0.03 0.14 0.14 0.05 -0.05 -0.03
0.24 0.08 0.16 0.18 -0.04 0.3 0.34 0.57 0.56 0.63 0.38 0.2 -0.63 -0.54 0.67 -0.47 -0.55 -0.88 -0.17 -0.88 -1.14 -0.47 -0.68 -0.6 0.44 0.31 0.03 0.14 -0.11 0.06 -0.28 -0.28
-0.0 0.27 0.27 0.56 0.38 0.53 0.65 0.54 0.51 0.42 0.37 0.24 -0.72 -0.56 0.3 -0.8 -0.06 -0.54 -0.31 0.54 -1.04 -1.29 -0.42 -0.62 -0.78 -0.13 0.15 0.39 -0.15 -0.08 -0.91 -0.91
0.29 0.32 0.27 0.47 0.06 0.48 0.49 0.49 0.63 0.83 0.59 0.36 -0.16 -0.48 0.58 0.15 -0.58 -0.97 0.1 -0.57 - -5.05 -0.39 -0.44 -3.29 -0.5 0.03 -0.04 -0.06 0.04 0.02 0.13
0.53 0.41 0.28 0.38 0.55 0.44 0.39 0.38 0.51 0.51 0.38 0.41 -0.05 -0.17 0.28 0.1 -0.55 -0.53 -0.02 -0.63 -3.62 -3.25 -0.49 -0.45 -1.23 0.16 0.16 0.2 -0.3 -0.32 -0.2 -0.45
-0.23 0.04 0.51 0.57 0.95 0.86 1.09 0.44 0.61 0.37 0.34 -0.23 -0.78 -0.51 1.13 -0.69 -0.29 0.14 -1.2 -0.5 -3.6 -0.94 -0.28 0.23 -3.68 -1.27 -0.85 -0.49 -0.26 0.25 -0.51 -0.32
-0.31 0.2 0.59 0.62 0.85 0.9 1.05 0.35 0.59 0.27 0.14 -0.39 -0.67 -0.09 1.79 -0.46 -0.17 0.32 -1.9 -1.1 -3.91 -0.52 -0.86 -0.56 -3.34 -0.78 -0.42 -0.13 -0.52 -0.13 -1.16 -1.33
-0.07 0.35 0.28 0.22 0.06 -0.1 0.73 0.45 0.67 0.9 0.59 0.47 -0.5 0.48 0.17 -0.24 0.32 0.56 0.94 -2.85 -1.82 -1.75 -0.83 0.08 -2.51 0.27 -1.58 -1.59 -0.52 0.25 -0.75 -1.12
-0.47 0.32 0.64 0.57 0.87 0.66 0.6 0.22 0.12 0.11 0.08 -0.3 -0.44 -0.89 1.22 -1.29 -0.63 -1.41 -0.53 -1.9 -0.96 -0.31 0.27 0.47 -0.45 -0.19 0.53 0.5 -1.66 -1.5 -0.51 0.14
0.18 0.03 0.4 0.3 0.12 0.17 0.42 0.21 0.42 0.5 0.61 0.28 -0.26 -0.62 -0.07 -0.69 0.5 -0.21 -0.28 0.87 -2.16 -0.25 -0.72 -0.52 -2.25 -0.45 -0.83 -0.65 0.1 0.33 0.29 0.08
0.41 0.57 0.56 0.41 0.21 0.43 0.54 0.15 0.26 0.65 0.66 0.45 -0.86 0.11 0.45 -0.36 -0.38 -1.29 -0.31 0.78 -2.74 -0.21 -0.37 -0.73 -1.24 0.06 -1.06 -0.16 -0.39 -0.37 -0.71 -0.44
-0.3 0.68 0.62 0.32 0.46 0.42 0.64 0.09 0.54 0.76 0.75 0.37 -0.79 -0.96 -0.17 -0.37 0.04 0.33 0.35 0.32 -1.15 -0.82 0.2 0.32 -5.3 0.04 -0.82 -0.56 -1.01 -0.48 -1.05 -1.42
-0.74 -0.34 -0.01 0.29 0.33 0.24 0.57 0.2 0.32 0.09 -0.01 -0.33 -0.88 0.73 1.58 0.04 0.1 -0.21 -0.13 -0.62 -2.09 -1.02 -0.73 -0.68 -1.82 -0.04 0.11 0.32 -0.21 0.21 -0.2 0.11
0.23 0.21 0.1 0.15 0.35 0.28 0.2 0.28 0.41 0.45 0.13 0.06 0.01 0.18 0.12 -0.16 -0.64 -0.59 0.17 -0.01 -0.89 -0.32 -0.55 -0.43 0.24 -0.26 0.16 0.2 -0.39 -0.28 -0.02 -0.65
0.79 1.06 0.49 0.58 0.95 0.64 1.15 0.18 0.74 -0.03 0.18 0.46 0.07 0.86 0.92 0.01 -1.54 -1.11 -0.15 - - - -0.32 -0.41 -3.42 0.1 -0.08 -0.23 -1.12 -1.26 -2.01 -2.73
0.28 0.47 0.55 0.72 0.33 0.63 0.41 0.89 0.49 0.49 0.75 0.61 -0.84 0.12 0.17 -0.72 -1.12 -2.24 -0.29 0.85 -1.5 -1.18 -0.66 -0.36 -0.17 -0.09 -0.13 -0.24 -1.1 -1.22 -0.97 -1.29
0.12 0.21 0.23 0.33 0.18 0.47 0.55 0.33 0.51 0.68 0.5 0.43 -0.21 -0.54 0.19 -0.12 -0.49 -0.88 -0.21 0.1 -0.42 -0.68 -0.59 -0.66 -0.6 -0.36 -0.1 -0.31 -0.32 -0.15 0.02 -0.1
0.57 0.61 0.79 0.66 -0.1 0.45 0.44 0.79 0.69 0.52 1.06 0.97 -2.7 -1.14 -3.28 -2.05 0.31 0.73 -1.89 1.2 -1.29 - -0.46 -2.32 -1.61 -1.16 -0.14 -1.09 -0.17 -0.78 0.14 -0.46
-0.21 0.18 0.66 0.7 0.94 0.87 0.96 0.67 1.16 0.78 0.82 0.19 -3.37 -1.24 0.95 -2.11 -0.13 0.01 -0.68 0.2 -3.52 -1.17 -0.91 -1.13 -2.9 -0.95 -1.33 -0.78 -0.58 -0.25 -0.6 -0.04
-0.09 0.12 0.62 0.49 0.11 0.38 0.73 -0.21 0.87 0.73 0.73 0.64 -0.67 -0.68 0.2 -0.38 -0.55 -0.05 -1.48 0.16 -4.91 -0.46 1.06 1.47 -3.58 -2.0 -2.92 -1.62 -0.33 -0.4 -0.66 -0.91
0.21 0.14 0.11 0.12 0.11 0.23 0.15 0.12 0.36 0.44 0.38 0.14 -0.02 -0.08 0.41 0.06 -0.58 -0.64 -0.16 0.8 -0.34 0.38 -0.29 -0.3 -1.35 -0.39 -0.32 -0.71 -0.42 -0.46 -0.07 0.17
0.26 0.22 0.21 0.35 0.59 0.49 0.54 0.35 0.65 0.39 0.44 0.41 -0.86 -0.27 0.7 -0.05 -0.94 -2.5 -0.31 0.72 -1.25 0.76 -0.66 -0.52 -0.57 -0.65 0.03 -0.2 -1.06 -0.75 -0.87 -0.72
-0.33 0.25 0.65 0.62 0.41 0.48 0.08 -0.15 -0.02 -0.06 -0.14 -0.32 -0.04 -0.44 1.15 0.22 0.02 -0.83 -0.4 0.69 -1.5 -0.53 0.38 0.14 -1.85 -0.06 0.22 0.5 -0.53 -0.2 -1.52 -1.43
-0.11 0.63 0.6 0.68 1.0 0.64 0.59 0.16 0.37 0.36 0.55 -0.01 -0.49 -1.35 1.1 -0.42 -0.15 -1.63 0.06 -0.47 -0.93 0.69 -0.21 -0.39 -3.85 0.27 -0.73 -0.36 -1.24 -0.75 -1.07 -1.87
-0.19 0.4 1.01 0.65 0.71 0.69 0.33 0.13 0.3 -0.01 -0.02 -0.14 0.07 -1.05 1.16 -0.01 -0.01 -0.6 0.38 -0.33 -1.33 0.05 -0.21 -0.55 -4.06 0.17 0.02 -0.02 -1.08 -0.8 -1.09 -1.69
-0.27 -0.26 0.52 0.43 0.16 0.13 0.7 0.56 -0.01 0.98 0.88 0.5 -2.33 -0.21 1.77 -2.38 -1.02 -0.3 -1.05 -0.05 -0.54 -1.73 -2.15 -1.65 -1.85 0.32 0.88 1.54 -2.92 -1.48 -3.14 -2.34
-0.18 -0.05 0.34 0.48 0.26 0.37 0.62 -0.04 0.45 0.14 0.16 -0.0 -0.66 0.71 0.72 0.09 0.25 -0.32 -1.36 0.23 -0.55 0.06 -0.32 -0.37 -0.72 -1.64 -0.3 0.12 -0.38 -0.14 -0.34 -0.33
0.39 0.35 0.37 0.37 1.23 0.58 0.8 0.65 1.06 0.78 0.91 0.55 -1.04 -0.51 1.07 -1.38 -0.58 -2.94 -1.27 -0.29 -0.45 0.02 -1.99 -1.64 -2.08 -0.25 -1.0 -0.58 -0.87 -0.61 -0.76 -1.07
-0.64 0.26 0.74 0.81 0.88 0.92 0.95 0.27 0.12 0.05 -0.07 -0.44 -1.26 -0.4 1.62 -0.41 0.3 -0.39 -1.1 -1.43 -2.12 -0.52 -0.64 -0.82 -4.52 0.7 0.07 0.43 -0.86 -0.79 -0.97 -1.35
-0.53 -0.55 0.33 0.35 0.77 1.01 0.64 0.51 0.3 0.26 -0.41 -0.93 -0.78 0.22 1.42 0.15 -1.03 -0.34 -0.62 1.06 -2.4 0.06 -1.15 -0.84 -0.98 0.2 0.33 0.02 -0.5 -0.33 -2.28 -1.96
0.09 0.57 0.62 0.82 0.99 0.99 0.48 0.34 0.18 0.58 -0.22 0.09 0.05 0.37 0.95 -0.64 -1.08 -1.18 -1.27 -5.08 -3.01 -1.8 0.09 0.4 -1.76 -0.82 0.3 0.24 -1.64 -1.63 -0.33 0.23
-0.26 0.07 0.61 0.46 0.62 0.48 0.73 0.44 0.58 0.58 0.46 0.03 -1.84 -1.33 0.31 -1.1 0.55 0.77 -1.38 -0.06 -1.88 0.69 -0.06 -0.74 -3.14 -0.86 -1.39 -0.75 -0.08 0.21 -0.12 -0.22
-0.12 0.23 0.54 0.65 0.76 0.58 0.2 -0.11 0.27 -0.1 -0.06 -0.15 -1.18 -0.71 1.08 -0.7 0.68 0.54 -0.46 0.83 0.29 -2.5 -0.32 -1.24 -1.28 -0.71 0.07 0.34 -1.02 -1.05 -0.59 -0.57
0.66 0.07 0.6 0.91 -0.56 -0.25 1.02 0.46 1.27 0.26 0.84 1.09 -2.32 -0.76 0.16 -2.52 -0.93 1.14 -0.97 0.69 - - -1.33 -1.62 -0.99 0.9 0.35 -0.61 -1.34 -0.72 -1.94 -1.73
0.54 0.82 0.82 1.13 0.91 0.86 0.3 0.12 1.0 0.85 1.06 0.88 -2.59 -0.53 1.09 -0.5 -1.13 -2.48 -1.11 -0.53 -7.55 -1.31 -2.71 -2.72 -1.2 -0.77 -0.76 -0.21 -1.05 -0.36 -0.8 -0.79
0.25 0.44 0.14 0.35 0.34 0.33 0.53 0.46 0.41 0.59 0.34 0.48 -3.37 -0.03 -0.23 -2.14 -0.47 -0.12 0.28 0.2 -1.71 -1.68 -0.27 -0.99 0.2 0.33 0.77 0.84 -0.6 -0.62 -1.19 -1.01
0.36 0.75 0.23 0.51 1.2 0.6 0.5 0.35 1.03 0.29 0.33 0.31 -0.24 -0.02 0.46 -0.01 -0.89 -2.89 -0.23 -2.79 -0.9 0.11 -0.4 -0.1 -1.45 -0.34 -0.44 -0.23 -0.96 -0.71 -0.92 -0.72
0.05 -0.11 -0.06 -0.07 0.04 0.17 -0.03 -0.01 0.01 0.18 0.09 -0.05 0.23 0.06 0.79 0.33 -0.47 -0.23 0.12 1.08 -0.25 0.75 -0.12 0.09 -1.43 -0.45 -1.18 -1.15 -0.36 -0.17 -0.31 -0.18
0.13 0.03 -0.1 0.0 0.38 0.42 0.52 0.49 0.34 0.56 0.26 0.2 -0.23 -0.56 0.59 -0.27 -0.3 -0.45 -0.17 -0.45 -1.16 -1.7 -0.12 -0.13 -0.62 0.05 0.36 0.35 -0.26 0.03 -0.44 -0.12
-0.17 -0.24 -0.16 0.04 0.22 0.22 0.47 0.43 0.44 0.44 0.25 0.17 -0.42 -0.29 0.76 -0.67 -0.76 -0.53 -0.2 0.35 -0.42 -0.52 -0.7 -0.59 0.24 0.36 0.42 0.33 -0.75 -0.57 -0.11 -0.02
0.22 0.14 0.2 0.1 0.29 0.31 0.26 0.19 0.0 0.04 0.01 -0.11 -0.24 -0.26 0.39 -0.0 -0.57 -0.49 -0.02 0.85 -0.45 0.39 -0.45 -0.32 0.08 -0.18 0.06 0.15 -0.6 -0.49 -0.32 -0.41
-0.33 0.12 0.35 0.38 0.55 0.5 0.41 0.18 0.22 -0.04 -0.06 -0.36 -0.67 -0.16 1.04 -0.2 0.22 -0.24 -1.26 0.42 -1.34 1.82 -0.17 -0.31 -3.17 -0.66 -0.52 0.08 -0.58 -0.5 -1.61 -1.72
-0.76 -0.64 -0.21 -0.3 0.64 0.52 0.31 0.5 0.3 -0.4 -0.56 -0.49 -0.87 -1.65 1.44 -0.38 -0.69 -0.21 -1.07 -1.55 -0.11 2.45 -1.11 -0.88 -0.75 -0.19 0.69 0.42 -1.0 -0.79 -2.03 -1.87
0.01 0.01 0.16 0.12 0.26 0.28 0.22 0.34 0.24 0.41 0.16 0.15 0.33 -0.24 0.94 0.3 -0.57 -1.42 -0.21 -0.09 -0.9 0.09 -0.14 0.21 -0.81 -0.31 -0.21 -0.06 -0.31 -0.03 -0.47 -0.46
-0.27 -0.25 0.21 0.69 0.7 1.0 0.88 -0.28 0.13 0.05 0.03 -0.33 -0.13 0.11 2.1 -0.06 0.3 -0.06 -0.56 -1.1 -1.26 -0.5 -2.49 -2.75 -3.61 -0.57 -0.1 0.24 -0.93 -0.47 -0.89 -0.7
0.32 0.72 0.57 0.49 0.95 0.76 0.49 0.22 0.58 0.68 0.63 0.5 -1.22 -0.81 1.07 -0.82 -0.45 -1.24 -2.32 0.67 -1.22 -0.1 -0.94 -0.74 -3.44 -0.4 -0.74 -0.35 -1.03 -0.78 -0.2 -0.53
0.5 0.52 0.49 0.41 0.29 0.43 0.24 0.16 0.5 0.67 0.58 0.41 -0.61 -0.4 0.57 -0.35 -0.6 -0.84 -0.56 0.69 -0.52 -0.18 -0.26 -0.03 -0.67 -0.46 -0.76 -0.59 -0.59 -0.44 -0.85 -0.83
0.31 0.3 0.29 0.32 0.48 0.42 0.33 0.35 0.34 0.56 0.31 0.34 -0.28 0.07 0.34 -0.24 -0.62 -1.25 -0.25 -0.09 0.11 0.05 -0.49 -0.67 0.54 -0.36 -0.26 -0.29 -0.54 -0.36 -1.18 -1.15
-0.76 0.37 0.69 0.83 0.97 1.04 0.9 0.04 0.58 -0.25 -0.11 -0.33 -0.82 -0.83 0.63 -0.65 0.19 -0.91 -0.41 -1.9 -2.93 1.36 -0.24 -0.34 -0.02 -1.41 -0.66 -0.41 -0.64 0.06 -0.66 -1.57
-0.12 -0.19 -0.25 -0.19 0.39 0.39 0.5 0.58 0.49 0.55 0.3 0.09 -0.34 -0.71 0.06 -0.01 -0.24 -0.67 0.21 -0.7 -4.11 -6.99 0.03 -0.19 -1.62 0.75 0.55 0.74 0.06 0.18 -0.17 -0.09
0.09 0.14 0.28 0.45 0.38 0.48 0.45 0.31 0.32 0.27 0.07 -0.09 -0.72 -0.58 0.7 -0.31 0.01 -0.9 -0.58 0.66 -0.97 1.16 -0.4 -0.27 -1.07 -0.56 0.05 -0.03 -0.55 -0.35 -1.01 -0.87
0.04 -0.01 0.22 0.07 0.04 0.2 0.09 0.11 0.3 0.27 0.27 -0.08 0.52 -0.12 -0.02 0.4 -0.35 -0.61 -0.25 1.03 0.1 0.53 -0.23 -0.18 -0.62 -0.65 -0.61 -0.61 -0.43 -0.48 -0.43 -0.3
-0.14 0.12 0.14 0.31 0.55 0.55 0.29 -0.22 -0.13 -0.31 -0.24 -0.67 0.23 -1.28 0.75 0.2 0.37 -0.47 -0.29 -0.47 0.33 1.39 -0.8 -0.83 -0.53 -0.68 0.25 0.31 -0.28 -0.04 -1.27 -1.02
-0.07 0.42 0.39 0.7 0.64 0.86 0.44 0.26 0.51 0.26 0.09 -0.16 -2.19 -1.28 0.66 -0.86 0.69 -0.03 -1.13 0.57 -1.91 0.29 -0.92 -2.43 -2.24 -0.45 0.01 0.34 -0.06 0.27 -0.24 -0.89
0.43 0.24 0.39 0.38 0.22 0.54 0.58 0.54 0.77 0.6 0.6 0.3 -0.77 -0.56 0.24 -0.79 -0.45 -1.41 -0.38 -0.19 -1.5 -1.1 -0.77 -0.48 -0.09 -0.32 0.13 0.08 -0.52 -0.35 0.02 0.04
-0.53 -0.2 -0.01 0.43 0.43 0.68 0.74 0.35 0.47 0.19 -0.01 -0.24 -0.56 -0.35 1.22 -0.44 -0.28 0.29 0.27 -0.62 -3.25 0.16 -0.28 -0.23 -0.72 -0.38 0.15 0.25 -0.27 -0.09 -0.92 -0.91
0.22 0.06 0.02 0.16 0.6 0.18 0.47 0.43 0.71 0.52 0.6 0.43 -0.67 -2.35 0.52 -0.61 -0.48 -0.69 -0.19 -0.08 -1.53 -4.17 -1.06 -0.68 0.2 -0.33 0.21 -0.31 -0.51 -0.09 0.47 0.86
0.46 0.52 0.36 0.21 0.73 0.37 0.23 0.51 0.61 0.5 0.29 0.33 -0.06 -0.11 0.3 0.2 -0.65 -0.78 0.48 -0.71 -2.31 -2.17 -0.28 -0.38 -0.59 -0.03 -0.28 -0.4 -0.38 -0.21 -0.55 -0.45
-0.02 0.14 0.39 0.49 0.71 0.64 0.63 0.27 0.36 0.02 -0.03 -0.03 -0.36 -0.02 0.31 -0.48 -0.07 -0.84 -0.53 0.23 -0.57 0.53 -0.45 -0.7 -0.64 -0.58 0.11 0.1 -0.46 -0.41 -0.45 -0.41
0.25 0.31 0.31 0.28 0.52 0.63 0.67 0.53 0.56 0.69 0.43 0.17 -0.66 -0.53 -0.11 0.15 -0.31 -0.44 -0.15 0.08 -4.01 -1.21 -0.4 -0.6 -2.97 -0.41 0.08 0.04 -0.2 0.04 -0.12 -0.02
-0.81 -0.88 -0.08 0.43 0.68 0.97 1.1 0.96 0.95 0.31 0.21 -0.25 -2.47 -2.41 0.81 -2.46 0.36 -1.11 -1.59 0.7 -1.05 0.49 -2.1 -2.75 -1.14 -1.72 0.85 1.17 0.04 -0.05 -1.21 -2.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.