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Heatmap: Cluster_198 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.51 0.01 -0.21 0.15 -0.42 0.1 0.37 0.63 0.5 0.64 0.66 0.62 -0.3 -0.34 -0.76 0.0 -0.64 -1.7 0.14 -3.99 -0.07 -3.1 -0.36 -0.1 0.36 0.98 0.17 0.1 -0.16 -0.2 -0.35 -0.4
0.47 0.24 -0.03 0.41 0.35 0.28 0.27 0.51 0.6 0.67 0.57 0.75 -0.63 -0.09 0.06 -0.43 -0.86 -5.11 -0.46 -2.1 0.03 -0.97 -0.7 -0.48 0.37 0.91 0.46 0.22 -0.95 -0.9 -0.76 -0.74
-0.03 0.42 0.94 0.19 -0.48 -0.54 0.25 -0.3 0.16 0.62 0.72 0.73 -1.69 -2.08 -2.56 -0.77 -0.43 0.37 0.66 -6.31 0.11 - 0.52 0.46 0.19 0.6 -0.91 -0.73 0.02 -0.11 0.59 0.27
0.74 0.4 0.58 0.51 0.86 0.61 0.43 0.61 0.94 0.98 1.13 0.63 -2.02 -2.96 1.02 -1.32 -0.3 -1.04 -1.17 -1.95 -5.49 -7.0 0.33 -0.75 -5.65 -0.1 -0.84 -0.46 -0.44 -0.38 -0.19 -0.12
0.7 0.58 0.34 0.32 0.25 0.28 0.35 0.2 0.37 0.32 0.23 0.42 -0.08 0.36 0.03 -0.14 -0.01 0.06 -0.32 -2.29 -1.5 -5.9 -0.19 -0.39 -1.6 -0.07 0.3 0.25 -0.16 -0.06 -0.3 -0.12
0.89 0.71 0.47 0.4 0.34 0.2 0.04 0.15 0.17 0.24 0.27 0.39 0.08 1.01 0.44 -0.03 -0.33 -0.55 -0.12 -4.01 -2.91 -3.68 -0.41 -0.43 -1.7 -0.19 0.08 0.13 -0.37 -0.27 -0.13 -0.01
0.58 0.21 0.22 0.29 0.2 0.07 0.12 0.36 0.39 0.64 0.59 0.5 0.01 -0.29 -0.22 -0.33 -0.71 -0.82 -0.33 -1.21 -0.18 -1.31 -0.66 -0.38 0.08 0.21 0.13 0.08 -0.45 -0.39 0.07 0.15
0.33 0.26 -0.21 0.2 0.05 0.05 -0.04 0.35 0.35 0.54 0.7 0.51 -0.19 0.35 -0.38 -0.08 -0.85 -3.25 -0.3 - -1.71 -0.81 -0.5 -0.46 0.76 1.04 0.66 0.67 -0.52 -0.62 -0.57 -0.25
0.47 0.12 -0.22 0.15 0.21 0.32 0.7 0.77 0.95 0.9 0.73 0.93 -2.56 -1.6 -1.6 -1.41 -0.25 -2.66 -0.72 -1.3 -0.85 -0.83 -0.41 -0.73 0.44 0.74 0.24 0.24 -0.18 -0.1 -0.14 -0.6
0.64 0.11 0.33 0.31 0.03 0.29 0.13 0.17 0.22 0.59 0.8 0.72 -0.61 0.16 -0.43 -0.44 -0.49 -2.47 -0.55 -0.7 -1.02 -2.2 -0.6 -0.8 0.19 1.16 0.22 0.21 -0.63 -0.46 -0.28 0.1
0.75 0.16 0.12 0.14 0.18 0.04 -0.11 0.07 0.24 0.52 0.68 0.73 -0.1 0.19 -0.49 -0.1 -0.27 -3.75 -0.07 -0.66 -0.85 -3.01 -0.37 -0.39 0.02 0.91 -0.15 -0.16 -0.24 -0.25 -0.14 0.38
0.71 0.37 0.08 0.35 0.55 0.29 0.21 0.62 0.58 0.66 0.5 0.64 -0.59 -0.13 -0.41 -0.22 -0.56 -2.73 -0.15 -0.79 -0.92 -0.74 -0.63 -0.61 1.08 0.03 -0.27 -0.26 -0.54 -0.54 -0.7 -0.76
0.25 0.24 0.19 0.26 0.18 0.09 0.39 0.32 0.36 0.49 0.4 0.45 -0.13 -0.43 -0.79 -0.01 -0.51 -0.93 -0.11 -0.47 -0.86 -2.05 -0.42 -0.34 0.63 0.67 0.29 0.45 -0.26 -0.25 -0.59 -0.62
0.88 0.69 0.56 0.43 0.42 0.4 0.4 0.47 0.53 0.57 0.52 0.64 -0.43 -0.06 0.54 -0.51 -0.36 -2.47 -0.2 -1.66 -1.72 -2.88 -0.54 -0.61 -0.23 -0.27 -0.43 -0.36 -0.21 -0.07 -0.37 -0.21
0.09 0.43 0.69 0.61 -0.1 0.51 0.81 0.87 0.48 0.63 0.58 0.71 -0.5 -1.42 -1.88 -0.57 -0.23 0.72 -0.11 -5.55 -0.76 - -0.22 -0.32 0.56 -0.32 -0.4 -1.03 -0.58 -0.21 -0.17 -0.41
0.7 0.73 0.84 0.88 0.73 0.72 0.65 0.01 0.3 0.52 0.67 0.64 -1.87 -0.88 0.81 -0.72 -0.33 -0.46 -0.59 -4.44 -3.62 -1.79 -0.09 -0.14 -5.29 -0.36 -0.86 -0.44 -0.1 0.54 -0.42 -0.85
0.24 0.84 0.66 0.72 0.07 -0.08 0.74 0.1 0.2 0.51 0.51 1.05 -1.89 -1.93 -2.24 -1.32 -0.04 -0.56 0.58 -3.69 -1.29 -5.5 0.51 0.7 1.15 -0.32 -0.54 -0.18 -0.55 -0.43 -0.74 -0.91
1.15 1.19 0.17 0.46 0.0 0.08 0.15 0.19 0.55 0.5 0.67 1.06 -1.15 -0.13 -0.65 -0.3 -1.25 -1.39 -0.4 -1.31 -1.14 -3.28 -1.23 -1.01 0.55 -0.04 0.3 -0.55 -0.89 -0.79 -0.11 0.58
-0.04 0.35 0.28 0.24 0.16 0.02 0.19 0.53 0.66 0.85 0.78 0.66 0.18 -0.18 -0.81 -0.2 -0.95 -1.05 -0.51 -5.27 -2.27 -2.28 -0.25 -0.29 0.92 0.9 0.12 0.33 -0.43 -0.63 -0.83 -0.58
0.89 0.35 0.21 0.22 0.39 0.29 0.14 0.4 0.52 0.54 0.57 0.73 -0.88 -0.39 0.63 -0.62 -0.62 -0.59 -0.62 -1.31 -1.44 -1.34 -0.31 -0.1 -1.42 0.03 0.22 0.42 -0.41 -0.27 -0.26 -0.15
-0.04 -0.1 -0.05 0.03 0.46 0.31 0.76 0.59 0.84 0.78 0.68 0.44 -1.19 -1.12 0.83 -1.21 -0.72 -1.89 0.72 -0.88 -1.12 -0.67 -0.79 -0.74 0.24 0.66 0.03 0.49 -0.46 -0.32 -1.68 -1.49
0.31 0.4 0.06 0.35 0.48 0.39 0.62 0.43 0.26 0.47 0.35 0.44 -0.07 -0.92 -0.58 -0.44 -0.85 -1.75 -0.43 -0.69 -1.55 -1.15 -0.02 0.23 0.69 0.11 0.5 0.56 -0.45 -0.51 -0.82 -0.53
0.54 0.06 0.9 0.95 -1.13 0.57 1.0 1.56 0.95 1.24 1.5 0.85 - - -3.69 -0.57 -0.6 0.62 -0.39 - -1.69 - -0.5 -0.31 - -0.59 -2.57 -0.16 -0.68 0.12 -0.54 -2.07
0.49 0.55 0.67 0.58 0.6 0.76 0.38 0.53 0.78 0.58 0.48 0.45 -0.8 0.36 -0.44 -0.97 -1.44 -1.36 -0.73 -1.03 0.64 -0.99 -1.06 -1.2 0.79 0.07 0.12 0.17 -1.62 -1.5 -2.06 -1.87
0.16 0.65 0.79 0.47 0.18 0.75 0.89 0.52 0.56 0.8 0.83 0.56 -0.55 0.07 -1.9 -0.32 0.65 0.22 -0.22 -4.26 -4.14 - -0.58 -0.73 -0.87 -0.16 -2.09 -0.43 -0.1 -0.05 -0.31 -0.42
1.14 0.68 0.66 0.56 0.55 0.28 0.39 0.24 0.58 0.53 0.74 0.72 -0.84 0.35 -0.26 -0.79 -0.31 -1.41 -0.03 - -6.42 -9.48 -0.61 -0.84 -4.09 -0.25 -0.08 0.01 -0.49 -0.24 0.53 0.28
0.4 0.73 -0.15 0.56 0.32 0.14 0.29 0.93 0.82 1.07 0.66 0.77 -0.31 -0.68 -0.06 -0.2 -0.89 -0.96 -0.14 -6.29 -0.73 -4.32 -0.79 -0.91 0.8 0.21 -0.06 -0.63 -0.43 -0.76 -1.06 -0.49
0.61 0.31 0.35 0.42 0.32 0.18 0.18 0.45 0.62 0.72 0.74 0.63 0.0 0.1 -0.27 -0.07 -1.03 -2.99 -0.46 -0.67 -0.91 -1.45 -0.26 -0.17 0.52 0.43 -0.31 -0.53 -1.05 -0.86 -0.52 -0.18
0.64 0.44 0.12 0.54 0.51 0.51 0.71 0.93 0.91 0.89 0.77 0.82 -4.16 -3.1 -2.88 -4.1 -2.74 -2.68 -2.61 -0.97 0.74 -0.45 -3.42 -4.78 1.68 1.22 0.55 0.77 -3.4 -3.64 -3.11 -3.63
0.58 0.33 0.4 -0.03 0.06 0.45 0.38 0.41 0.37 0.74 0.61 0.37 -0.39 0.33 0.43 -0.5 -0.77 -2.57 -0.82 -1.71 -0.04 -5.07 -0.55 -0.51 0.61 0.71 0.59 0.33 -1.05 -0.85 -0.94 -0.83
0.4 0.38 0.41 0.79 0.38 0.12 0.65 0.66 0.54 0.11 0.71 0.23 -3.98 -2.18 -2.21 -1.83 -0.6 -0.41 0.13 -1.41 - - 0.11 -0.42 1.39 -0.11 0.58 1.64 -0.92 -0.95 -1.42 -1.48
1.04 0.87 0.8 0.53 0.42 0.34 0.43 0.12 0.45 0.64 0.81 0.73 -0.83 0.42 0.81 -0.22 0.01 0.01 -0.44 -3.58 -3.62 -4.32 -0.3 -0.5 -4.36 -0.82 -1.32 -1.42 -0.28 -0.14 -0.38 -0.58
0.35 0.37 0.39 0.52 0.12 0.08 0.51 0.52 0.33 0.37 0.28 0.49 0.08 -0.38 -0.63 -0.07 -0.62 -1.65 -0.12 -1.29 -0.07 -0.77 0.09 0.11 0.73 -0.36 -0.33 -0.56 -0.33 -0.33 -0.44 -0.23
0.7 0.45 0.1 0.09 0.12 -0.04 0.39 0.57 0.53 0.59 0.55 0.69 -0.04 0.3 -0.15 -0.04 -0.8 -1.25 -0.4 -2.75 -0.65 -3.8 -1.03 -1.26 1.11 -0.07 0.57 0.44 -0.35 -0.35 -1.07 -1.25
0.5 0.28 0.13 0.2 0.11 0.2 0.48 0.76 0.84 0.97 0.83 0.9 -0.75 -1.18 -1.42 -0.55 -0.75 -4.23 -0.89 -1.91 -0.46 -1.51 -0.55 -0.46 0.88 1.02 0.16 0.04 -0.38 -0.5 -1.01 -1.27
0.63 0.51 0.44 0.38 0.32 0.18 0.29 0.08 0.18 0.29 0.33 0.5 -0.25 -0.05 -0.0 -0.17 -0.42 -1.79 -0.25 -0.27 -1.32 -1.38 -0.22 -0.23 0.57 -0.31 0.17 0.11 -0.49 -0.32 -0.24 -0.08
0.79 0.66 0.14 0.41 0.02 -0.08 -0.02 0.12 0.32 0.31 0.59 0.77 -0.79 -0.09 -0.79 0.05 -1.11 -5.93 -0.6 -0.8 0.33 -1.38 -0.94 -0.88 0.7 0.12 0.39 -0.39 -0.86 -0.77 0.32 0.87
0.5 0.14 -0.24 0.25 0.23 0.35 0.27 0.72 0.92 0.88 0.8 0.78 -0.96 -1.18 -0.59 -0.78 -0.6 -1.98 -0.67 -1.28 -0.24 -0.26 -0.43 -0.32 0.7 0.37 0.07 -0.11 -0.49 -0.5 -0.55 -0.83
0.62 0.62 0.58 0.46 0.22 0.23 0.45 0.44 0.5 0.62 0.66 0.52 -0.38 0.25 0.54 -0.29 -0.46 -1.23 -1.7 -2.57 -2.37 -1.82 -0.87 -1.16 -0.49 -0.67 -0.05 0.06 -0.46 -0.35 0.71 0.27
0.28 0.39 0.37 0.34 0.38 0.19 0.12 0.44 0.38 0.5 0.51 0.44 -0.22 -0.32 -0.35 -0.22 -0.54 -1.51 -0.17 -0.65 -0.49 -0.73 -0.35 -0.36 0.75 0.27 0.07 -0.1 -0.52 -0.51 -0.4 -0.39
0.38 0.47 0.28 0.21 0.13 0.24 0.18 0.34 0.65 0.63 0.55 0.54 -0.38 -0.36 -0.54 -0.27 -0.54 -3.63 -0.07 -1.29 -0.39 -0.7 -0.39 -0.27 0.69 0.77 0.03 0.13 -0.49 -0.41 -0.72 -0.85
0.52 0.19 -0.31 0.15 0.06 0.4 0.5 0.69 0.83 0.86 0.95 0.86 -1.67 -1.36 -1.85 -0.84 -0.97 -1.7 -1.24 -0.44 -0.68 0.1 -0.78 -0.45 0.64 1.21 0.01 0.1 -0.82 -0.68 -0.79 -0.92
0.36 0.57 0.42 0.46 0.2 0.43 0.1 0.1 0.26 0.27 0.4 0.41 -0.6 0.29 -0.48 -0.26 0.04 -0.51 -0.73 -1.19 -0.55 -1.81 0.24 0.08 0.75 -0.26 -0.08 0.15 -0.47 -0.32 -0.64 -0.57
0.8 1.05 0.48 0.45 0.44 0.34 0.48 0.38 0.43 0.38 0.4 0.68 -0.34 -0.69 -2.24 0.89 -0.53 -3.1 -0.4 -1.49 -2.9 -2.08 -0.59 -1.11 0.72 0.5 0.23 -0.37 -0.16 -0.2 -0.97 -1.42
0.09 0.22 0.22 0.15 0.13 0.15 0.48 0.63 0.52 0.55 0.43 0.36 -0.38 -0.31 -0.11 -0.33 -0.5 -0.64 -0.2 -0.64 -0.75 -0.41 -0.42 -0.51 0.54 0.4 0.12 0.09 -0.42 -0.45 -0.56 -0.38
0.63 0.61 0.53 0.4 0.72 0.47 0.31 0.26 0.4 0.35 0.35 0.32 -0.22 0.09 0.67 0.04 -0.14 -0.04 0.2 -2.74 -2.04 -1.14 -0.3 -0.49 -3.58 -0.72 -0.25 -0.19 -0.25 -0.24 -0.52 -0.23
0.6 0.54 0.58 0.46 0.6 0.51 0.37 0.13 0.57 0.59 0.46 0.23 -0.19 -0.26 -0.15 -0.22 -0.36 -0.67 -0.94 -0.56 -0.25 -2.99 -0.52 -0.48 0.77 -0.28 -0.2 0.12 -0.59 -0.67 -0.84 -1.02
0.35 0.39 0.53 0.31 0.48 0.35 0.41 0.14 0.36 0.65 0.79 0.36 -0.32 -0.19 0.31 -0.39 0.07 -0.21 -0.31 -1.16 -3.36 -1.01 -0.06 0.0 -2.53 -0.27 -0.51 -0.05 -0.13 0.16 -0.35 -0.21
0.75 0.83 0.96 0.66 0.56 0.6 0.51 0.46 0.69 0.85 0.82 0.75 -1.06 -1.9 1.05 -0.18 -1.7 -1.73 -2.21 -3.95 -1.43 - -0.83 -0.75 -5.68 1.07 0.52 0.57 -1.53 -1.24 -1.97 -2.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.