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Heatmap: Cluster_219 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.08 -0.26 -0.25 0.0 0.23 0.31 0.3 0.58 0.41 0.36 0.28 0.15 -0.25 -0.93 0.17 -0.19 -0.42 -1.03 0.0 -3.37 -4.46 -5.0 -0.13 -0.14 -0.76 1.18 0.9 0.92 0.04 -0.02 -0.08 0.19
-0.04 0.02 0.15 0.36 0.31 0.26 0.25 0.61 0.39 0.43 0.31 0.24 -0.28 0.15 -0.58 -0.3 -0.78 -0.89 -0.21 -2.53 -1.8 -3.85 -0.34 -0.28 -0.48 1.08 0.88 0.91 -0.48 -0.57 0.09 -0.22
-0.02 0.19 0.09 0.23 0.34 0.35 0.31 0.62 0.43 0.46 0.35 0.21 -0.41 -0.71 0.07 -0.39 -0.77 -1.33 -0.19 -8.66 -2.77 -2.11 -0.5 -0.41 -0.23 0.93 1.13 1.08 -0.72 -0.55 -0.04 -0.08
-0.23 -0.07 0.29 0.42 0.4 0.21 0.38 0.28 0.3 0.25 0.21 -0.13 -0.04 0.44 0.06 0.11 -0.29 -1.04 0.11 -2.43 -2.85 -3.05 -0.01 0.01 -1.1 0.44 0.76 0.7 -0.13 -0.13 -0.16 0.02
0.17 0.11 0.19 0.31 0.32 0.19 0.24 0.49 0.39 0.44 0.36 0.2 -0.19 -0.35 0.02 -0.32 -0.64 -0.93 -0.06 -3.28 -1.59 -2.36 -0.44 -0.31 -0.22 0.79 0.75 0.84 -0.6 -0.43 0.15 0.02
0.05 0.11 0.09 0.33 0.33 0.41 0.43 0.57 0.56 0.49 0.48 0.18 0.18 -0.25 0.35 -0.12 -0.22 -0.91 -0.3 -1.87 -4.73 -2.27 -0.44 -0.39 -1.54 0.58 0.8 0.78 -0.31 -0.19 -0.66 -0.47
0.07 0.07 0.06 0.33 0.58 0.28 0.13 0.43 0.19 0.26 0.13 -0.13 -0.24 -0.32 -0.96 0.19 -0.78 -2.73 0.01 -2.6 -1.95 -4.47 -0.07 -0.1 -0.26 1.35 0.92 1.05 -0.67 -0.73 0.36 -0.26
-0.05 0.17 0.3 0.32 0.6 0.48 0.43 0.56 0.25 0.32 0.29 0.07 0.07 -0.19 0.43 0.12 -0.36 -1.29 -0.13 -0.94 -3.73 -3.39 -0.04 0.08 -2.1 0.49 0.56 0.61 -0.31 -0.16 -0.57 -0.34
0.06 0.25 0.46 0.51 0.47 0.49 0.43 0.53 0.31 0.14 0.06 -0.02 -0.71 -0.09 -0.52 -0.42 0.17 -0.24 0.12 -4.27 -2.29 -5.06 -0.23 -0.36 -0.52 0.05 0.73 0.9 0.06 0.15 -0.24 -0.36
0.12 0.06 0.08 0.48 0.43 0.43 0.33 0.42 0.36 0.24 0.1 0.04 -0.43 0.09 -0.27 -0.2 -0.15 -0.91 0.05 -3.91 -1.45 -4.22 -0.1 -0.21 -0.12 0.64 0.79 0.85 -0.33 -0.22 -0.37 -0.21
-0.06 -0.05 0.31 0.35 0.63 0.48 0.49 0.45 0.4 0.35 0.16 0.03 -0.06 -0.05 0.54 0.17 -0.32 -0.69 0.32 -1.64 -3.66 -2.12 -0.01 0.04 -1.89 0.67 0.19 0.29 -0.38 -0.3 -0.38 -0.49
-0.02 0.2 0.19 0.36 0.41 0.29 0.32 0.36 0.36 0.37 0.21 0.13 -0.04 -0.13 -0.01 0.19 -0.38 -0.95 -0.01 -1.17 -3.98 -1.99 0.02 0.09 -1.2 0.99 0.62 0.74 -0.49 -0.3 -0.58 -0.8
0.06 0.16 0.36 0.31 0.44 0.38 0.38 0.4 0.34 0.23 0.31 0.02 0.04 0.07 0.64 0.13 -0.37 -0.74 -0.12 -1.87 -1.65 -3.08 0.16 0.28 -2.25 0.5 0.45 0.54 -0.43 -0.33 -0.68 -0.56
-0.08 0.17 0.14 0.45 0.61 0.24 0.7 0.63 0.5 0.47 0.38 0.12 -0.21 -0.22 0.83 0.01 -0.52 -1.57 0.08 -6.64 - - -0.49 -0.19 -4.1 0.95 0.71 0.89 -0.35 -0.34 -0.97 -0.65
-0.07 -0.01 0.02 0.25 0.41 0.33 0.4 0.48 0.29 0.31 0.14 -0.07 0.03 -0.89 -0.63 0.25 -0.49 -1.48 0.52 -1.89 -1.94 -1.5 -0.16 -0.18 -0.15 0.73 0.85 1.03 -0.09 -0.01 -0.86 -0.82
-0.06 -0.1 -0.13 0.17 0.38 0.01 0.45 0.56 0.41 0.48 0.19 0.27 -0.34 -0.51 -0.19 -0.16 -0.41 0.15 0.13 -2.31 -2.37 -3.1 -0.25 -0.12 -0.6 1.02 0.61 0.64 0.04 0.15 -0.55 -0.39
-0.3 -0.29 -0.07 0.05 0.27 0.23 0.41 0.6 0.42 0.42 0.33 0.09 -0.1 -0.76 -0.41 0.0 -0.22 -0.46 0.05 -2.61 -1.76 -3.76 -0.11 -0.1 0.17 0.79 0.64 0.78 0.06 -0.0 -0.13 -0.31
0.15 0.06 0.32 0.28 0.44 0.4 0.15 0.25 0.26 0.22 0.05 -0.06 0.17 -0.19 0.39 0.3 -0.58 -1.03 0.1 -0.69 -2.09 -1.09 -0.15 0.0 -0.53 0.39 0.43 0.57 -0.53 -0.47 -0.21 -0.08
-0.25 -0.19 -0.1 0.04 0.18 0.1 0.19 0.39 0.25 0.16 0.11 0.04 -0.37 -0.33 0.07 -0.2 -0.45 -0.59 0.05 -2.01 -1.05 -1.73 -0.35 -0.33 0.14 1.09 1.05 0.91 -0.37 -0.35 -0.06 -0.01
-0.11 -0.12 0.01 0.23 0.33 0.3 0.43 0.66 0.51 0.5 0.33 0.16 -0.48 -0.5 0.02 -0.34 -0.58 -1.28 0.07 -1.62 -1.55 -2.37 -0.54 -0.42 -0.51 0.72 0.89 0.92 -0.31 -0.2 -0.14 0.02
0.02 0.02 0.06 0.23 0.15 0.21 0.34 0.5 0.43 0.35 0.23 0.19 -0.39 -0.13 -0.41 -0.42 -0.59 -1.01 -0.34 -2.65 -0.87 -3.17 -0.48 -0.58 0.14 0.97 1.12 1.02 -0.42 -0.44 -0.15 -0.18
0.14 0.25 0.29 0.25 0.27 0.33 0.36 0.4 0.33 0.47 0.32 0.25 -0.15 -0.29 -0.22 -0.12 -0.83 -1.04 0.15 -1.56 -1.24 -1.62 -0.64 -0.55 -0.49 0.92 0.81 0.86 -0.52 -0.44 -0.55 -0.36
-0.26 -0.27 0.05 0.11 0.23 0.35 0.42 0.56 0.46 0.31 0.23 0.05 0.11 -0.39 0.37 0.11 -0.3 -0.74 0.05 -2.63 -1.41 -1.42 -0.07 0.08 -0.13 0.81 0.51 0.62 -0.12 -0.03 -0.79 -1.16
-0.16 -0.31 -0.22 0.23 0.42 0.33 0.52 0.71 0.45 0.39 0.25 0.04 -0.22 -0.52 -1.1 0.16 -0.58 -2.21 0.43 -5.33 -2.63 -4.95 -0.2 -0.33 -1.54 1.18 0.96 0.94 -0.17 -0.17 0.14 0.14
-0.16 -0.49 -0.32 0.03 0.5 0.51 0.64 0.7 0.57 0.3 0.21 0.09 -0.68 -1.25 -0.15 -0.23 -0.66 -1.89 -0.05 -4.03 -2.51 -1.11 -0.72 -0.49 -1.59 1.43 1.23 1.31 -0.3 0.01 -0.79 -0.6
0.03 0.03 0.23 0.36 0.51 0.51 0.59 0.69 0.49 0.36 0.36 0.11 -1.0 -0.9 -0.89 -0.67 -0.49 -1.12 -0.44 -1.72 -2.01 -1.08 -0.58 -0.69 -0.7 0.85 1.3 1.35 -0.55 -0.51 -0.66 -0.66
-0.39 -0.11 0.33 0.55 0.69 0.71 0.76 0.75 0.64 0.5 0.33 -0.06 -1.43 -1.45 0.08 -1.32 0.23 -0.67 -0.94 -3.06 -3.61 -2.27 -0.7 -1.05 -1.56 0.57 1.1 0.98 -0.43 -0.29 0.16 0.19
-0.11 -0.29 -0.23 0.23 0.37 0.37 0.54 0.68 0.48 0.5 0.28 0.26 -0.39 0.22 -0.15 -0.11 -0.51 -1.79 0.27 -3.84 -2.88 -4.18 -0.37 -0.48 -0.99 0.93 0.92 0.98 -0.26 -0.2 -0.23 -0.29
0.16 -0.03 -0.15 0.07 -0.05 -0.03 -0.08 0.22 0.29 0.34 0.36 0.26 -0.39 0.42 -0.1 -0.05 -0.51 -0.96 -0.1 -1.48 -2.26 -2.24 -0.26 -0.1 -0.34 1.01 0.96 0.91 -0.35 -0.33 0.1 -0.08
0.2 0.15 0.29 0.36 0.48 0.38 0.29 0.28 0.1 0.12 -0.02 -0.07 -0.24 -0.43 0.04 0.1 -0.19 -0.97 0.48 -4.2 -4.55 -4.04 -0.06 -0.01 -0.69 1.04 0.65 0.71 -0.23 -0.21 -0.04 -0.18
-0.26 -0.11 -0.03 0.07 0.33 0.17 0.19 0.51 0.26 0.19 0.14 -0.15 0.05 -0.81 -1.06 0.28 -0.46 -1.48 0.24 -4.12 -3.39 -5.61 0.07 0.23 0.08 1.18 0.74 0.79 -0.03 0.02 0.3 0.04
0.26 0.22 0.18 0.27 0.36 0.17 0.14 0.31 0.14 0.17 0.15 0.1 -0.39 -0.36 -0.02 -0.18 -0.52 -0.86 -0.03 -1.48 -0.49 -4.95 -0.48 -0.36 -1.62 1.18 1.12 1.23 -0.42 -0.43 -0.57 -0.63
0.14 0.35 0.3 0.37 0.38 0.17 0.42 0.3 0.28 0.29 0.28 0.1 -0.13 0.27 0.58 0.24 -0.33 -1.2 -0.0 -0.96 -2.93 -5.03 -0.35 -0.42 -1.97 0.21 0.62 0.67 -0.33 -0.2 -0.12 0.01
-0.23 0.04 0.01 0.45 0.54 0.45 0.76 0.75 0.64 0.42 0.22 0.12 -0.22 -0.27 0.38 0.16 -0.44 -1.2 -0.04 - - -4.59 -0.13 -0.08 -3.48 0.18 1.0 0.92 -0.16 0.03 -0.67 -0.73
0.22 0.07 0.07 0.22 0.33 0.38 0.47 0.4 0.26 0.33 0.06 0.14 0.08 -0.04 0.48 0.3 -0.43 -0.96 0.11 -1.96 -2.59 -2.86 0.01 0.13 -0.95 0.49 0.64 0.55 -0.24 -0.2 -0.49 -0.53
0.2 0.12 0.32 0.27 0.45 0.41 0.36 0.37 0.39 0.29 0.28 0.23 -0.24 -0.3 0.18 0.11 -0.37 -0.57 -0.07 -4.57 -5.13 -3.11 -0.06 -0.02 -1.0 1.06 0.67 0.86 -0.27 -0.26 -0.86 -0.92
-0.11 0.08 0.09 0.21 0.03 0.12 0.43 0.58 0.44 0.58 0.47 0.3 -0.31 -0.75 -1.06 -0.33 -0.34 -1.13 0.44 -5.76 -7.62 - -0.09 0.05 -3.75 1.25 0.81 1.0 0.17 0.18 -0.28 -0.33
0.14 0.19 0.31 0.51 0.48 0.3 0.11 0.19 0.1 0.05 0.06 -0.05 -0.35 -0.22 -0.22 0.03 -0.18 -0.76 0.21 -1.37 -1.58 -2.82 -0.07 -0.17 -0.61 0.88 0.82 0.97 -0.37 -0.28 -0.51 -0.4
0.03 0.22 0.39 0.37 0.49 0.28 0.34 0.28 0.36 0.33 0.32 0.13 -0.07 -0.49 0.6 -0.0 -0.31 -1.33 0.09 -0.08 -2.4 -0.67 -0.4 -0.31 -1.44 0.1 0.32 0.53 -0.26 -0.14 -0.35 -0.34
-0.27 -0.16 0.05 0.35 0.37 0.26 0.53 0.59 0.52 0.42 0.35 0.24 0.17 0.13 -0.04 0.01 -0.22 -1.0 -0.47 -2.99 -1.86 -3.56 -0.14 -0.04 -1.25 0.7 0.56 0.71 -0.13 -0.08 -0.18 -0.4
0.04 0.14 0.12 0.28 0.32 0.2 0.35 0.33 0.33 0.32 0.18 0.17 -0.54 0.05 -0.12 -0.36 -0.05 -0.67 0.07 -1.41 -1.77 -2.8 -0.23 -0.28 0.1 0.38 0.75 0.91 -0.16 -0.15 -0.34 -0.36
0.21 0.23 0.35 0.21 0.2 0.37 0.3 0.41 0.18 0.17 0.18 0.05 -0.13 0.16 0.68 0.1 -0.34 -0.11 -0.21 -1.94 -2.75 -4.75 0.1 -0.12 -1.8 0.27 0.67 1.0 -0.25 -0.19 -0.64 -0.62
0.03 0.07 0.01 0.51 0.38 0.3 0.3 0.37 0.38 0.39 0.46 0.19 -0.39 -0.06 -0.2 -0.3 -0.26 -0.37 0.37 -1.72 -3.06 - -0.21 -0.16 -0.26 0.71 0.88 0.85 -0.32 -0.12 -0.98 -1.02
-0.15 -0.28 0.04 0.22 0.51 0.81 0.65 0.81 0.62 0.61 0.42 0.03 -0.92 -0.28 0.15 -0.65 -0.25 -0.82 -0.06 -3.12 -2.39 -5.23 -0.49 -0.65 -0.38 0.53 0.81 0.85 -0.33 -0.37 -0.06 -0.45
-0.08 -0.03 0.01 0.2 0.31 0.36 0.47 0.55 0.4 0.41 0.26 0.21 -0.2 0.2 0.18 -0.08 -0.24 -0.77 -0.17 -2.47 -1.75 -2.3 -0.2 -0.15 -0.32 0.48 0.68 0.86 -0.13 -0.09 -0.46 -1.07
0.09 0.07 0.31 0.54 0.38 0.35 0.19 0.27 0.17 0.16 0.15 0.0 -0.14 -0.14 -0.7 0.29 -0.46 -1.1 0.25 -5.6 -4.46 -8.3 -0.04 -0.03 -2.43 1.34 0.73 0.9 -0.44 -0.51 0.34 -0.15
-0.01 -0.05 0.04 0.19 0.22 0.03 0.18 0.47 0.36 0.55 0.46 0.35 -0.21 -0.58 -0.67 0.16 -0.36 -1.31 0.17 -8.25 -1.46 -2.27 -0.31 -0.36 -0.92 1.16 0.49 0.58 0.13 0.2 0.09 0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.