Heatmap: Cluster_131 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-1.18 - - - - -0.65 1.09 -1.11 - 2.42 - 0.13 -0.59 - 0.87 - 1.0 - 0.87 - - 2.48 -0.77 -0.78 - - - 2.53 0.85 0.3 - -
-0.35 -1.24 - -0.26 1.04 -1.96 0.64 -0.04 -0.6 2.54 -0.09 0.88 - - -2.22 - - -1.33 -0.98 - - - -1.85 - 1.76 1.67 2.67 0.32 - - - -1.9
0.2 0.3 0.48 0.28 0.7 0.34 -0.26 0.4 0.36 0.93 0.6 0.26 -0.09 -0.07 0.68 0.79 -0.43 -3.21 -0.72 -1.54 0.18 -0.29 -0.63 -0.32 -1.24 0.31 -0.54 0.27 -0.74 -0.79 -1.03 -1.21
0.18 -1.94 -1.58 -1.1 -0.69 -0.41 0.48 1.15 -0.02 1.47 1.15 0.73 - 2.11 1.65 -1.56 -2.79 -2.57 - - - - - -2.73 0.31 1.69 1.38 0.52 -2.87 -2.77 -2.8 -
0.26 0.07 0.22 0.22 0.2 0.3 0.31 0.29 0.39 0.47 0.32 0.24 -0.58 -0.27 0.07 -0.21 -0.2 -0.35 -0.07 -4.35 0.86 0.19 -0.42 -0.41 -1.33 0.25 0.2 0.23 -0.22 -0.22 -0.59 -0.61
- - - - - - -2.27 -0.82 - 3.27 - - - - - - 1.63 3.52 -1.44 - - - - -2.47 - 0.89 - - 0.06 0.47 -0.71 0.63
0.37 - 1.73 - - 1.74 - - - - - 1.03 0.91 1.14 - 0.66 - - - - - - -0.14 -0.25 2.34 0.64 - - 0.93 0.49 1.25 1.17
- - 4.26 - - - - - - - - 3.68 - - - - - - - - - - - - - - - - - - - -
0.78 0.1 - 0.8 - - - -0.04 - 1.95 -0.61 0.76 -0.52 -0.91 1.28 0.56 0.46 - 1.32 - - - - - 2.13 - 0.53 1.55 - 0.92 -0.69 -
-0.19 1.21 1.49 1.17 -1.16 0.71 -1.49 0.38 0.97 2.21 1.26 1.52 - - - -3.54 -3.57 -3.04 -3.7 -1.1 -1.41 -2.19 -3.74 - -0.92 2.04 -1.39 0.66 - - -3.73 -
1.18 - 2.39 1.05 -4.04 2.02 - 1.87 0.09 - - - - -1.11 -0.54 - -0.21 0.82 0.83 - - - 0.21 - 0.42 - 0.1 1.71 -0.99 -0.51 - -
1.25 - 3.42 - - - - - - - - - - - - 2.35 - - - - - - - 3.19 - - - - - 2.21 - -
-0.49 -1.05 0.7 0.21 -1.95 -0.33 -0.31 0.72 0.24 1.1 0.01 -0.41 - 0.42 1.34 -3.23 -3.48 -1.31 -3.6 -0.97 -0.63 -1.87 -4.65 - 0.19 1.53 2.14 2.21 -4.75 -4.6 -3.62 -2.69
-0.73 -3.11 -1.13 -1.64 -1.26 -1.84 -0.43 -0.43 0.8 1.9 -1.52 -0.68 -1.74 1.11 -1.03 -0.07 -1.3 -2.85 2.64 - - - -2.94 -0.54 1.59 0.19 1.82 -0.67 -0.63 -0.29 -1.91 -1.4
0.03 0.31 0.56 -0.43 -0.49 0.08 0.71 -0.28 0.03 0.95 -0.02 0.61 -0.72 0.5 0.14 -0.44 -0.43 -2.62 -0.02 -3.49 -3.24 -1.11 -0.62 -0.69 -0.3 1.18 1.4 0.96 -1.06 -1.05 -0.24 -0.54
- - 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.31 - -2.71 0.84 -1.22 0.87 -0.78 -0.28 -0.39 1.73 -0.17 0.85 -1.41 -1.43 -1.0 - -2.41 -2.34 -2.54 - 1.56 - -0.5 -2.61 1.96 -0.13 2.42 0.93 -1.56 -0.52 - -1.03
- -0.56 - -0.14 - 0.28 1.82 0.57 -1.46 1.53 - -0.49 0.75 -0.46 -2.07 -0.17 -0.4 - 2.39 - - - 0.26 -0.47 0.68 - 2.29 - 0.21 0.2 - -
-2.07 -1.32 - 0.07 -0.05 -0.03 1.96 0.04 -1.19 2.21 0.19 -0.27 -0.92 - -0.6 - -0.01 -0.42 2.52 - - - -1.13 -1.14 - - - - -1.07 0.52 -0.1 2.0
-0.58 - 0.23 -1.15 0.17 1.38 -0.23 -1.51 0.59 - -1.8 -1.18 0.55 -0.48 -0.94 -1.16 -18.38 - 0.47 - - 1.61 - -0.57 2.38 1.74 1.35 0.09 0.35 -1.12 - -1.35
1.15 1.22 2.83 2.26 2.45 - - -0.0 1.6 -0.0 - 1.25 - - - - - - 0.4 - - - - - - - - - - 0.41 - -
-1.15 -0.41 -1.16 -0.08 -1.74 -0.43 -0.03 0.36 -0.3 1.24 0.51 0.1 1.28 -0.05 -1.92 1.32 -0.7 - -1.15 -3.82 - -0.18 0.27 0.37 0.76 0.5 1.26 1.02 -0.57 -1.17 -0.8 -0.88
0.46 1.81 3.9 1.9 - - - - - - - - - - - - - - - - - - - - - 3.07 - - - - - -
0.14 -0.52 0.53 -0.31 -0.86 0.63 0.15 -0.16 -0.43 1.54 -0.51 0.06 0.09 -2.71 1.13 0.05 -0.41 -0.28 -0.49 - - - -0.59 -0.83 -2.35 1.54 0.1 1.0 0.35 0.33 -0.02 -0.34
- - 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.41 - - - - - 1.27 0.53 - 1.73 -0.98 -0.45 -1.82 -2.17 -1.65 -1.66 0.92 1.62 0.35 - 1.35 - 1.1 0.32 - - - 0.29 1.34 0.86 1.19 0.76
0.06 1.37 2.21 2.53 1.64 1.64 - - 1.5 1.9 - 2.36 - - - - - - - - - - - - - - - - - - - -
0.52 0.28 0.51 -0.11 -0.13 0.06 0.48 0.36 0.4 1.27 0.58 0.69 -2.32 -3.37 -2.88 -1.49 -1.13 -0.73 -0.35 -0.13 0.34 -0.53 0.05 -0.23 1.88 -0.6 -1.73 -1.23 -0.47 -0.04 -0.68 -0.41
-2.16 - -0.38 -0.17 - - 2.01 0.6 0.9 2.18 1.47 -0.04 -0.35 - - - - - 0.77 - - - - -2.02 - 2.74 0.47 1.86 - - - -
- - 1.09 - - - -0.63 - -0.61 2.29 - - - - -0.22 0.64 0.55 1.71 2.07 - 1.77 - - -0.44 - 0.59 - 1.7 -0.64 -0.51 1.04 -
- - -0.31 - 0.15 -1.22 -0.59 - -1.62 2.55 - -0.1 - - -2.24 - - - - - - - - - - 0.65 - 4.28 -1.87 -1.72 - -
0.21 - - - - - - - - 3.67 - - - - 0.66 - - - - - - - - - - 4.05 - - - - - -
-1.27 -1.94 1.51 -0.59 - 0.29 - 0.21 - 1.85 - 0.73 -0.74 - - -0.63 - 2.21 0.13 - - - 0.45 - 1.76 1.92 0.68 - -0.27 0.5 -0.25 -
0.83 1.14 1.57 0.1 -0.38 0.6 0.31 0.37 0.93 1.82 1.58 0.38 0.27 0.2 0.23 -1.5 -2.45 -1.84 -1.72 - - - -1.49 -0.84 -1.69 0.92 -0.66 -2.26 -1.72 - -1.72 -2.28
-0.53 - - - - -0.91 - - - 2.61 - - - - 2.49 - - - - - - - -1.21 - 3.7 0.05 2.04 - - -1.11 - -
1.07 0.07 -0.13 -1.26 -0.7 1.79 1.45 - 0.45 0.89 -0.67 0.13 - - - - -0.66 -0.12 0.78 - - - 1.38 1.26 2.07 1.14 - - -0.87 -0.78 - -
-1.07 -0.14 -0.88 -0.12 -2.02 -0.39 0.78 0.27 -0.88 1.61 0.27 -0.75 -1.24 0.69 1.26 -0.0 -2.12 -3.52 0.21 - -1.9 - -0.78 -1.6 -0.71 2.03 1.54 1.6 -1.68 -3.17 -1.04 -2.28
- - 1.01 - - 0.49 0.29 - - 2.62 0.27 - - 0.21 - 0.63 - 2.49 - - - - - - - 2.44 1.84 - 0.48 - - 0.38
- 1.85 3.67 - - 0.2 - - 2.62 - 3.06 - - - - - - - - - - - - - - - - - - - - -
- 1.17 0.47 -0.25 -1.09 2.47 0.87 - 0.91 0.13 - 1.7 -1.0 0.7 0.13 - -1.02 -0.48 0.44 - - - -1.01 -1.22 1.67 0.86 - - -1.26 -0.14 - -1.23
- 1.88 2.74 1.6 - 2.43 2.01 - 1.73 0.13 - - - - - 0.58 - 0.85 - - - - 0.56 - - - - - - - - -
-0.03 0.38 - -0.49 - -1.49 -1.39 0.43 -2.04 1.63 1.03 0.45 -1.61 - -1.59 -1.44 0.95 1.26 1.83 - - - -1.77 - - 1.8 0.91 1.82 -0.19 -0.14 -1.75 -
-0.47 -1.85 -2.05 0.18 - -0.65 -1.77 -2.04 -1.02 1.73 0.2 0.17 -0.63 - - 0.48 0.64 2.13 -0.19 - - - -0.62 -1.72 1.86 1.4 -0.22 0.6 1.6 -1.73 -1.75 -1.81
-1.33 0.69 0.69 1.24 0.46 1.96 1.36 -1.35 - 1.83 - -0.23 - - - - - - - - - - -1.23 -1.25 2.69 -0.03 1.27 1.18 - - - -1.26
- -1.98 -1.56 -2.32 0.29 - 1.38 - - 2.4 -1.66 - -0.1 -0.44 0.61 0.59 0.98 0.23 -0.9 - - - -0.14 -1.03 1.89 - 0.99 0.45 -0.44 0.01 0.63 0.73
-1.41 -0.79 -1.26 -2.95 -0.59 -1.59 -0.32 1.01 0.59 1.89 0.6 -1.32 -8.16 -1.98 -0.61 -0.63 -0.59 -0.27 -0.32 1.2 -5.32 -4.32 1.04 1.04 -0.52 2.27 -0.62 -29.36 -0.22 -0.3 -1.1 -0.1
- - - - - - - 1.02 -0.32 2.4 -0.16 - -0.12 - -0.93 -0.09 - - 1.34 - - - - 0.68 2.58 0.88 1.18 2.0 1.24 - - -
1.15 1.44 1.74 -0.48 0.88 2.01 0.95 2.01 2.13 1.01 -1.13 1.09 - - - - - - -0.94 - - - - -1.02 - - 0.25 - - - - -
-0.36 -2.2 -3.39 -1.78 -3.33 1.1 0.94 0.21 -1.17 1.11 -3.18 0.42 - -1.11 -1.38 -0.83 -0.6 -0.92 -0.02 - - - -0.16 0.01 2.06 1.39 1.85 0.8 0.6 0.45 -1.45 -1.52
-0.08 0.08 0.55 0.25 0.2 0.47 0.48 0.66 0.71 1.17 0.98 0.46 -1.2 -0.81 0.75 -1.88 -0.92 -4.55 -1.31 -0.84 0.69 -1.74 -1.05 -0.91 0.05 0.72 0.41 0.94 -1.78 -0.94 -2.05 -2.21
-0.16 -0.77 - 0.61 - -1.63 -0.09 1.05 -0.53 1.76 0.88 0.85 -2.65 -0.87 -3.29 -1.65 0.46 0.85 0.39 - - - -1.76 0.24 2.11 0.0 -0.43 0.5 -2.77 -0.46 -0.22 0.71
-0.26 1.38 1.23 -0.5 - -1.38 -0.82 0.69 -0.0 1.88 -0.36 0.04 -0.68 0.19 - - - 1.48 1.68 - - - -1.46 -1.47 - - 1.43 1.79 - -0.4 - 0.08
- - 4.37 - - - - - - 3.49 - - - - - - - - - - - - - - - - - - - - - -
0.86 1.07 0.38 0.78 1.16 2.36 2.46 1.17 0.7 0.73 0.54 0.93 -2.38 - 0.07 - - - - - - - - - - - - 1.07 - - - -
-0.2 -1.4 -0.1 -0.73 -2.71 0.02 -1.34 -1.76 -0.57 -1.27 -3.71 -1.1 -1.69 0.83 -0.09 -1.31 -0.59 -1.63 1.1 - 0.53 -0.07 -0.06 0.2 1.68 1.28 1.3 1.03 0.32 0.11 -0.13 0.36
- - 3.39 - - - - - - - - - - - - 1.89 1.87 2.91 1.74 - - - - - - - - - - - 1.72 -
-0.05 0.17 -0.97 -0.89 0.43 -0.23 0.36 -0.16 -0.4 1.18 -0.87 -2.45 0.3 0.21 1.37 0.17 -0.62 -1.04 0.43 -0.25 - 0.49 -0.08 -0.21 -0.26 0.03 -0.34 0.55 -0.15 -0.08 0.11 0.04
- - 2.77 -0.17 - - 0.16 - 0.26 2.66 - - - - - - 0.39 - 3.39 - - - - - - - - - 0.39 - 1.35 -
-3.11 - -0.62 -0.22 - 0.29 0.44 2.22 0.82 2.18 0.92 0.77 2.31 1.39 -2.31 0.16 - - -2.6 - - - - -1.6 - 1.31 -1.37 -0.24 - - -2.62 -
-2.03 -1.48 0.01 -0.66 -1.34 -2.22 -0.23 -1.85 0.57 2.1 -0.21 0.51 1.79 -1.82 -1.63 1.36 -1.13 - 1.45 - - - -3.8 -1.29 - 1.46 -0.67 1.97 -1.01 0.09 -1.7 -0.99
- - - - - - - - - 3.6 - - - - - 0.16 - - - 1.47 1.6 - - - 3.69 - -15.15 - - - - -
- 2.08 - 0.7 1.96 1.3 -1.94 - 1.31 2.75 -1.78 - - 2.55 - - - -0.51 - - - - - - - -0.7 1.51 - - - - -
- - -17.37 - - - - - - 3.91 - - - - - - - - - 2.66 - - - - 3.42 - - - - - - -
1.61 1.74 1.95 0.18 1.3 1.35 -0.21 0.73 0.9 -2.04 1.62 0.84 - -1.08 - - - - - -1.2 - - -0.82 -4.4 - 0.06 1.68 -1.54 - - -22.34 -
- - - 0.68 -0.02 0.56 0.4 0.18 -0.16 2.24 - -1.3 - - - - - - - 1.39 - - - -1.15 - 0.04 2.58 3.15 -1.06 - - -
-0.13 -1.7 -0.91 0.69 1.88 -0.43 1.72 0.22 0.01 2.63 -0.78 -0.71 -1.69 1.14 2.59 -1.64 -1.65 0.01 -1.81 - - - - - - - - - -1.7 - -1.75 -1.79
0.17 0.27 -0.65 -1.32 - 0.55 0.61 1.31 -0.32 2.39 -2.11 -0.27 0.19 - 0.32 -0.63 -0.8 - 0.06 - - -0.26 0.41 0.05 - 0.25 1.13 0.42 0.68 0.42 -0.88 -
-0.35 2.06 1.85 1.03 -0.36 -0.08 0.51 0.72 0.74 1.74 0.88 1.13 -2.57 -0.37 -2.11 - -0.84 -1.51 -13.92 -3.29 -4.19 - -0.62 -1.78 -1.25 0.12 -0.72 -1.41 -2.94 -1.36 -0.4 -0.69
-0.41 -0.33 -0.75 0.45 -0.06 0.36 0.55 0.98 -0.13 1.22 -0.02 -0.7 -0.06 -0.45 1.51 0.03 -0.91 -3.05 -0.36 - -0.07 - 0.55 0.53 -2.17 -0.1 0.58 1.21 -0.7 -0.87 -1.24 -0.81
- - - - - - 2.72 1.4 1.74 3.18 - 1.7 - - - 1.96 - - - - - - - - - - - - - 1.69 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.