Heatmap: Cluster_184 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-6.34 -3.42 -3.99 -5.15 -5.13 -3.79 -4.55 -2.4 -5.79 -3.98 -2.97 -3.77 2.65 0.49 -3.18 4.51 -5.36 - -2.08 - - - -5.41 -3.42 - -4.39 -4.18 - - -3.35 -5.4 -
-0.79 -1.79 -1.43 -2.02 -0.99 -0.22 -0.43 -0.18 -0.08 -0.39 -0.51 -0.99 -1.87 0.05 -0.44 1.02 -1.64 -0.02 0.32 -0.9 2.27 -1.27 -1.51 -0.64 -0.23 0.92 1.63 1.0 -0.42 -0.12 -0.31 -0.18
0.25 -0.64 0.19 0.68 0.2 -0.61 0.26 0.63 0.07 -0.1 -0.39 0.08 0.45 1.62 0.87 2.91 -4.36 -3.67 0.08 - - - - -1.54 1.05 - -0.48 -1.86 -3.5 -1.75 -5.76 -1.65
-1.16 -0.98 -0.39 -0.52 -0.82 -0.54 -1.01 -0.46 -1.2 -0.45 -0.53 -1.17 2.2 -0.78 -0.24 2.74 -2.96 -2.83 0.5 - -0.96 -2.21 -1.03 -0.19 0.99 1.4 0.43 -1.49 -1.01 -1.03 -0.31 -2.48
-4.96 -3.15 -3.03 -3.68 -3.69 -3.99 -2.88 -3.36 -4.01 -5.6 -4.64 -3.93 -1.09 -1.22 -6.51 2.75 -2.51 0.8 1.4 -4.57 -1.54 -3.21 -4.23 -0.69 -3.0 2.17 2.21 0.48 0.05 -0.21 1.56 1.16
-0.71 -0.64 -0.56 -0.85 -0.4 -0.71 -0.72 -0.45 -0.45 -0.48 -0.46 -0.76 1.06 1.33 0.33 2.62 -1.09 -0.65 1.06 -1.7 -3.38 - -1.29 0.29 -0.18 -0.07 0.16 0.63 -0.63 0.07 -1.86 -1.53
-0.27 -0.43 -0.4 -0.01 -0.1 -0.02 -0.21 0.27 0.64 0.49 0.68 0.34 1.45 0.71 -0.19 2.57 -1.31 -3.4 -1.12 -6.57 - -2.67 -0.5 -0.34 -1.88 0.47 -0.87 -1.0 -0.96 -0.61 -0.97 -0.6
-0.98 -0.68 -0.88 -1.16 -0.58 -1.13 -0.91 -0.75 -0.32 -0.86 -0.45 -0.64 -1.67 0.01 -9.32 2.64 0.05 -0.5 1.57 - - - -1.14 0.87 -3.6 0.89 0.66 -0.52 0.33 0.91 -0.57 1.22
-3.75 -3.59 -3.8 -3.32 -3.06 -2.62 -2.85 -3.13 -3.19 -3.96 -3.83 -3.44 0.07 1.04 0.05 2.69 -1.72 2.37 1.48 -0.08 -0.98 -5.48 -2.06 0.14 -3.18 -0.76 1.35 -0.64 0.21 0.29 -0.1 0.94
0.41 0.34 0.25 0.44 0.74 0.54 0.02 -0.1 0.2 0.25 -0.09 -0.22 1.66 0.32 -1.96 2.32 -0.59 -1.23 -0.49 -3.12 -1.13 -6.76 -0.9 -0.65 -1.92 -0.85 -1.03 -0.45 -0.44 -0.54 -1.04 -1.04
-2.4 -1.33 -2.43 -1.76 -1.42 -1.9 -1.51 -0.01 -0.51 0.0 -0.62 -0.78 2.7 -0.82 -1.27 3.51 -1.03 -0.33 0.14 -9.7 -1.59 -7.2 -2.07 -1.15 -3.53 -0.14 -2.15 -2.39 -0.36 -0.51 -1.41 -1.13
0.12 -0.63 -0.57 -0.45 -0.75 -0.72 -0.79 -0.66 0.05 0.14 0.39 0.53 1.81 -0.02 -0.87 3.04 -2.03 -4.39 -1.95 -2.02 -3.69 -1.48 -0.9 -0.6 0.55 0.52 -0.58 -0.82 -1.45 -1.04 -1.35 -0.96
- - - - - - - - - - - - -0.21 - - 4.74 - - 0.7 - - - - - - - - - - -0.15 -0.09 -0.21
-1.44 -1.68 -2.1 -1.61 -1.11 -1.77 -1.31 -1.05 -1.44 -0.7 -1.13 -1.63 2.18 0.56 -0.91 3.01 -1.01 -1.45 1.59 - -4.32 - 0.84 0.77 -3.13 0.19 -0.65 -0.54 -0.09 -0.46 -0.78 -1.01
-3.4 -3.43 -3.15 -3.27 -2.26 -3.43 -3.14 -2.42 -2.57 -3.03 -2.37 -2.89 1.22 0.01 -2.04 1.94 -3.29 0.75 1.96 0.75 2.04 -0.32 -2.84 -0.87 -2.49 -0.1 1.21 -1.13 -0.26 -0.31 1.02 1.28
-1.52 0.54 -1.44 -1.25 - -0.61 -0.78 -2.76 -1.97 -1.26 -1.89 0.16 1.79 - -1.58 3.31 -0.2 -0.59 2.25 - - - - -0.08 -0.54 -1.4 -1.35 - -1.13 1.13 -0.37 -2.66
- - - - - - - - - - - - 0.55 - 2.7 3.97 - 1.05 - - - - - - - - - - 0.26 1.4 - 1.29
-1.08 -0.97 -2.9 -1.17 -2.21 -1.15 -0.82 -1.53 -2.15 -2.82 -0.88 -1.58 1.81 2.41 -0.64 3.56 -2.22 -0.05 0.59 - - - -4.04 -1.91 - -0.32 -0.3 -2.77 -1.05 -1.16 -1.78 -1.46
- - - -0.9 - - - - - -1.79 - - 1.49 1.92 0.71 4.28 - 0.04 - - - - - -0.52 - - - 0.84 - - - -
0.66 -1.53 -0.94 -0.53 -1.55 0.6 -0.52 -0.62 -1.04 -1.1 -0.89 -0.61 1.32 1.14 -1.55 3.3 -1.53 -2.35 -0.15 - -0.62 - -1.12 -0.69 1.82 -1.86 - - -1.17 -1.8 -1.47 -0.85
0.37 -0.12 -0.32 -0.02 0.47 0.13 -0.35 0.08 0.62 0.78 0.74 0.35 2.2 0.43 0.82 2.71 -6.49 -7.26 -3.25 - -6.48 - -5.4 -1.98 -1.85 0.86 -3.19 -2.39 -3.93 -2.48 -4.43 -3.06
-0.4 -3.17 -1.77 -0.91 -1.7 -0.75 -0.41 0.12 -1.68 -0.78 -0.55 -1.7 0.98 2.25 0.29 2.81 -1.93 -0.78 -1.26 - -3.27 1.27 -3.54 -2.54 -0.41 -0.54 1.12 0.8 -1.03 -1.12 -2.29 -2.67
-1.76 - - -1.5 - - - -1.3 -1.95 -1.18 -0.46 0.0 2.15 2.23 1.89 3.32 -4.06 - -3.93 0.22 - 0.58 -4.01 -1.99 - 0.81 - -1.31 -4.04 -1.43 - -
-4.04 -1.3 -2.5 -2.01 - -2.46 -2.29 - -4.19 -3.43 -2.45 -3.28 -2.57 -1.28 -0.03 2.79 -4.12 1.33 2.75 - 1.0 - -2.66 -0.12 -2.05 -2.1 -0.57 -0.29 -0.26 0.3 0.46 2.0
0.65 -0.4 -0.26 -0.47 0.13 -0.7 -0.45 0.01 -0.25 -0.16 -0.35 0.31 -0.77 -2.42 -2.13 2.59 0.58 0.64 1.38 -1.18 - - -0.48 0.68 -1.37 -0.92 -1.65 -1.0 0.28 0.83 -1.18 -1.73
-0.16 -0.92 0.44 0.37 -1.13 0.46 0.27 -2.58 0.16 -1.9 -0.26 0.23 0.91 -2.43 -0.71 3.4 -1.74 -2.86 -0.42 -1.61 -0.93 -0.97 -0.48 -0.11 -0.21 -2.28 -0.85 -2.71 -2.37 -0.74 -0.85 -0.33
-3.11 -2.93 -1.1 -0.4 -1.04 -1.43 -3.27 -1.79 -1.72 -1.83 - -1.11 -0.78 -0.4 -1.44 2.33 -3.28 -0.94 2.48 - 0.08 - -0.64 0.36 1.4 0.43 - - 0.47 0.44 1.6 1.34
- - - - - - - - - - - - - 3.12 - 4.29 - - - - - - 1.92 - - - - - - - - -
0.05 -0.04 -0.02 -0.16 0.02 -0.18 -0.16 -0.37 -0.12 -0.15 0.01 -0.06 -0.12 0.58 -0.5 0.94 -0.97 -0.28 0.24 -1.51 1.17 0.2 -0.85 -0.09 -0.17 0.69 0.56 -0.34 -0.46 -0.35 -0.34 -0.17
-1.47 -0.58 -0.79 -0.88 - - -0.51 -2.25 0.31 - 1.32 -1.05 0.74 2.45 1.7 3.7 - - - - - - - - - - - - -1.01 -0.38 - -
-0.69 - - - -0.62 -0.33 - - -0.18 0.67 - - 0.69 1.76 - 3.25 -1.55 - 1.8 - 0.65 - 0.02 - - 1.78 1.65 - - - - -
-0.59 -1.71 -1.39 -0.79 -2.04 -1.57 -1.63 -3.11 0.16 0.3 -2.3 -1.29 2.54 1.99 1.01 3.6 -4.46 -1.98 -2.13 - - - - -1.46 - -2.32 -2.0 - -4.47 -1.25 -4.44 -1.69
-4.43 -4.11 -3.67 -3.73 -3.07 -3.06 -2.91 -3.2 -3.44 -2.97 -2.8 -3.57 0.47 0.64 -0.46 2.57 -2.0 0.71 1.8 -2.78 1.75 -0.06 -3.02 0.2 -2.24 0.92 0.72 -0.72 0.18 0.04 0.36 1.2
-0.48 -0.45 -1.53 -0.2 0.34 -0.13 -0.07 0.1 -0.06 -0.06 -0.34 -0.34 1.86 0.32 0.23 1.96 -0.88 -2.2 0.71 - - - -0.29 -0.16 -1.21 0.53 0.16 -0.73 0.26 -0.0 0.22 -0.69
0.01 -0.23 0.27 0.08 -0.26 0.05 0.9 0.84 1.14 0.27 0.51 0.43 1.0 0.06 -1.15 2.52 -2.2 -0.87 -2.69 - -3.55 - 0.42 0.38 0.02 -3.79 -1.19 -1.3 -1.63 -0.6 -2.72 -2.05
-2.16 - - - 1.82 - - -1.04 - 1.35 - - 0.33 2.42 1.9 3.43 - - -0.98 - 1.05 - - -0.97 - - - - -0.98 -0.97 - -
- -0.5 - - - - - - - 1.6 0.47 - 2.13 0.63 -0.52 2.63 0.74 - 2.11 - - - 0.82 0.74 - - 1.13 - 0.65 - -0.21 -
-1.07 -1.14 -0.82 -0.97 -0.96 -1.11 -0.86 -0.66 -0.53 -0.77 -0.86 -0.86 1.02 0.35 0.07 3.49 -1.21 -1.9 -1.08 -0.85 -0.66 -4.64 -0.82 -0.22 -2.56 0.02 -0.05 -0.24 -0.23 -0.14 -0.62 -0.61
-1.86 -1.88 -0.92 -2.2 -2.02 -1.48 -0.54 -0.84 -0.4 -0.76 -0.73 -1.62 -0.68 0.99 -0.38 1.09 -1.29 1.78 0.07 -0.09 -0.86 -0.7 -0.0 1.03 -0.91 -0.67 1.52 0.61 0.07 0.09 0.41 1.03
- - - - - - - - - 0.07 - - 0.38 1.38 1.94 3.96 - 1.54 - - - - - - - - - - 1.2 1.28 - -
- - - - - - - - - - - - - - - 4.08 - - - - - - 3.91 - - - - - - - - -
- - - - - - - 1.25 - - - - - - - 4.01 - 2.81 - - - - - - - - - - 1.71 - 1.67 -
-0.48 -0.48 -1.2 -0.98 -0.86 -0.45 -0.59 -0.88 -0.73 -0.52 -0.71 -0.23 -0.8 0.63 -0.16 1.24 -1.21 0.78 1.65 -0.12 1.29 -0.49 -1.41 -0.08 0.34 0.23 -0.37 -0.91 0.1 0.32 -0.02 0.34
0.18 -0.27 -0.69 -0.18 -0.33 -0.39 -0.31 -0.68 -0.65 -0.18 -0.28 -0.46 1.39 1.32 1.25 2.21 -0.96 -1.2 1.24 -6.24 - - -1.39 -1.27 -4.36 0.79 0.17 0.29 -0.73 -0.59 -1.38 -1.13
-3.94 -4.86 -3.98 -4.28 -3.12 -3.38 -3.68 -3.22 -4.85 -4.89 -4.48 -4.67 1.19 1.54 -1.23 3.73 -5.02 0.14 -1.88 -3.6 -4.94 - -4.83 -0.84 -6.1 -0.81 2.64 0.45 -1.1 -0.93 -1.14 -0.8
-0.56 -0.63 -0.67 -0.25 -0.69 -0.57 -0.65 -0.37 -0.6 -0.66 -0.67 -0.49 2.11 0.56 0.15 2.24 -1.44 -1.72 0.64 - -3.88 - 0.56 0.81 -1.69 0.84 0.29 0.5 -1.08 -0.86 -0.8 -1.46
-2.73 -1.97 -2.24 -2.37 -2.12 -2.54 -2.34 -2.53 -2.11 -2.46 -2.45 -2.58 0.72 -2.12 -2.12 3.27 -0.95 -0.46 1.71 -0.83 -0.73 -4.72 0.03 1.08 -0.99 -0.11 0.1 -0.99 0.36 0.58 0.75 0.66
-0.37 -0.45 -0.27 -0.03 0.06 -0.24 0.02 0.16 0.16 0.51 0.16 0.02 1.23 0.43 -0.15 1.72 -0.24 0.16 0.02 -0.48 -1.16 0.27 -0.62 0.11 -3.09 -0.3 -0.89 -1.65 -0.41 -0.35 -0.32 -0.18
- - - - - - - - - - - - 2.36 - - 2.96 0.89 - 2.74 - - - 0.67 1.76 - - - - 0.92 0.85 0.91 -
- - - - - - - - -1.12 - - - -0.86 3.02 -0.34 4.14 - 0.65 -0.02 - - - - -1.08 - - - - -0.14 -1.0 - -
-0.87 -0.66 -0.42 -0.76 -0.8 -0.78 -0.86 -0.93 -0.64 -0.59 -0.56 -1.01 1.63 0.1 -1.31 1.97 -0.56 -1.13 0.53 -0.75 -1.91 -0.4 0.28 0.24 -0.31 1.08 0.51 0.2 -0.15 0.21 -0.02 0.21
- - - - - - - - -0.85 0.72 0.38 - 0.21 2.32 0.83 4.1 - - - - - - - - - - - 1.77 - - - -
-1.47 -1.06 -1.41 -0.59 -3.3 -0.76 -0.85 -1.9 -1.49 -0.72 -1.06 -1.12 0.98 0.1 0.03 2.45 -1.41 1.19 2.05 -2.38 -2.07 - -0.99 -0.02 -1.15 0.47 1.63 -0.69 -0.17 -0.36 -1.11 -0.36
-1.27 -1.32 -1.01 -0.9 -2.24 -0.89 -1.15 -0.88 -1.3 -1.03 -1.55 -1.91 1.49 1.13 -0.85 3.48 -2.54 -0.42 0.14 -4.03 -3.2 - 0.18 1.15 -1.51 -2.36 -0.29 -0.36 -0.66 -0.26 -1.26 -0.67
- - -1.15 -3.51 - - - - -4.08 - - - -0.23 - -3.57 4.42 - -1.29 - - - - - - - - - - 1.43 0.38 -1.99 2.15
-1.23 -1.14 -1.24 -1.65 -1.47 -1.43 -1.56 -1.48 -1.5 -1.76 -1.55 -1.49 0.42 0.82 -0.23 2.41 -0.46 0.48 1.74 -1.56 -3.2 -2.27 0.21 1.24 0.31 0.64 -0.04 -0.78 0.15 0.27 -0.09 0.11
-0.94 -1.16 -1.72 -2.06 -1.41 -1.39 -1.21 -0.38 -2.31 -1.18 -0.27 -2.12 -0.91 -0.13 -0.39 2.34 -0.45 -0.9 1.56 - - -1.63 1.41 1.83 -1.13 -1.38 -2.45 -0.54 1.92 0.95 -0.61 -0.53
- - - - - - - - - - - - 2.3 - - 2.44 1.28 - 0.63 - - - 0.69 1.13 - - - - 0.82 2.58 2.41 -0.25
0.18 0.03 -0.06 -0.36 0.27 -0.3 0.02 -0.37 -0.52 0.05 -0.01 0.16 0.81 0.99 0.98 2.0 -1.04 -0.99 0.66 -6.15 -1.0 -1.25 -1.62 -1.49 -0.54 0.28 -0.35 -0.28 -0.15 -0.13 -0.69 -0.72

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.