Heatmap: Cluster_92 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00272650 (evm_27.TU.AmTr_v1.0_scaffold00001.549)
- - - - - - - - - - - - - - - - - - - - 4.46 -
-10.82 -8.98 -8.15 -5.56 -9.09 -9.78 -17.26 -10.26 -13.68 -13.48 -9.11 -10.27 -9.93 -10.69 -10.79 -10.83 -9.8 -6.72 -8.82 -9.0 4.46 -11.47
AMTR_s00012p00184400 (evm_27.TU.AmTr_v1.0_scaffold00012.115)
-1.75 -2.2 -1.69 -0.47 -0.95 -2.75 -8.11 -0.62 -7.3 -7.52 -8.49 -7.67 -8.84 -6.78 -7.25 - -8.42 -6.54 -8.26 -6.9 4.25 -9.31
AMTR_s00012p00184530 (evm_27.TU.AmTr_v1.0_scaffold00012.116)
- -3.7 -1.79 -2.31 -2.49 -2.22 -10.7 -3.22 -9.38 -8.33 -5.75 -7.47 -4.58 -5.02 -4.34 -4.63 -3.66 -5.29 -7.3 -4.23 4.36 -5.22
AMTR_s00019p00029530 (evm_27.TU.AmTr_v1.0_scaffold00019.8)
- -1.2 -0.25 0.28 -1.71 - -5.18 -2.51 -2.01 -2.83 0.07 -3.06 -3.34 -3.44 -2.78 - -3.62 -2.25 -1.74 -3.13 4.03 -4.8
-3.75 -3.87 -3.72 -7.11 -4.17 - - - - - -7.84 - -8.57 -7.63 -7.21 -6.62 -8.2 -5.25 -6.41 -4.86 4.43 -10.4
-2.59 -2.89 -2.0 0.23 -1.81 -6.05 -8.99 -4.03 -9.15 -8.12 -7.27 -6.83 -5.35 -5.2 -5.66 -5.22 -3.94 -6.02 -6.87 -2.8 4.29 -6.0
AMTR_s00028p00130230 (evm_27.TU.AmTr_v1.0_scaffold00028.44)
-1.53 -0.55 -1.78 -3.76 -0.61 -6.73 -9.46 -3.11 -10.89 -10.13 -7.45 -5.67 -8.51 -6.11 -6.03 -5.24 -6.17 - -5.32 -4.65 4.3 -6.15
AMTR_s00034p00235600 (evm_27.TU.AmTr_v1.0_scaffold00034.118)
- - - - - - - - - - - - - - -1.31 - - - - - 4.43 -
AMTR_s00055p00210620 (evm_27.TU.AmTr_v1.0_scaffold00055.152)
- - - - -2.08 - - - - - - - -2.92 - -2.31 - - - - - 4.42 -
-2.6 -3.19 -2.43 1.34 -2.28 -5.98 -10.41 -3.79 -10.07 -9.75 -6.7 -5.49 -5.84 -5.51 -6.15 -5.71 -3.09 -5.97 -6.46 -3.27 4.2 -5.95
-2.87 -3.33 -2.79 -2.2 -1.77 -8.26 -10.65 -5.08 -10.49 -10.26 -7.84 -7.49 -8.22 -7.43 -7.15 -7.06 -6.25 -6.31 -6.61 -4.29 4.39 -8.19
AMTR_s00065p00190870 (evm_27.TU.AmTr_v1.0_scaffold00065.166)
- - - - - - - - - - - - - - - - - - - - 4.46 -
AMTR_s00072p00125230 (evm_27.TU.AmTr_v1.0_scaffold00072.64)
-2.75 -2.41 -1.97 0.68 -0.98 -6.25 -8.25 -0.89 -8.9 -8.83 -5.73 -7.76 -7.89 -6.78 -5.35 -7.33 -4.63 -5.95 -7.47 -5.58 4.22 -7.36
-2.12 -2.6 -2.31 -2.69 -2.35 -7.06 -10.71 -5.31 -10.9 -11.12 -6.52 -8.22 -8.54 -7.67 -7.27 -6.96 -5.6 -5.15 -6.4 -4.6 4.38 -8.87
AMTR_s00082p00133500 (evm_27.TU.AmTr_v1.0_scaffold00082.30)
- - - - - - - - - - - - - - - - - - - - 4.46 -
AMTR_s00083p00097430 (evm_27.TU.AmTr_v1.0_scaffold00083.24)
- - - - - - - - - - - - - - - - - - - - 4.46 -
-1.2 -1.18 -2.0 -5.22 -1.19 -8.31 -12.07 -3.57 -10.31 -11.85 -5.92 -6.75 -8.32 -6.84 -6.12 - -3.78 -4.99 -6.27 -4.23 4.33 -9.79
AMTR_s00093p00066420 (evm_27.TU.AmTr_v1.0_scaffold00093.16)
- - - - - - -3.47 - - - - - - - - - - - - - 4.45 -
AMTR_s00102p00106890 (evm_27.TU.AmTr_v1.0_scaffold00102.59)
-4.39 -5.86 -4.9 -1.59 -3.96 -7.91 -12.44 -2.34 -12.05 -12.28 -8.02 -8.29 -8.91 -7.34 -7.38 -8.33 -6.36 -5.04 -5.76 -4.59 4.4 -8.82
AMTR_s00102p00108130 (evm_27.TU.AmTr_v1.0_scaffold00102.61)
-1.63 -2.66 - 0.76 -2.74 - -8.05 -2.29 -8.53 -8.85 -4.96 -4.41 -5.82 -4.06 -4.59 -3.81 -3.16 -4.28 -5.37 -3.77 4.24 -4.81
AMTR_s00102p00108730 (evm_27.TU.AmTr_v1.0_scaffold00102.62)
-4.16 - -3.43 -3.77 -2.2 -3.02 - -1.54 -9.72 -9.63 -6.24 -6.4 -6.44 -5.9 -5.47 - -4.05 -6.59 -6.57 -4.39 4.38 -6.29
AMTR_s00106p00134900 (evm_27.TU.AmTr_v1.0_scaffold00106.104)
- - - - -2.73 - - - - - - - -2.21 - - - - - - -2.42 4.42 -
AMTR_s00140p00081000 (evm_27.TU.AmTr_v1.0_scaffold00140.36)
-7.37 -4.67 -3.85 -2.11 -2.78 -10.11 -11.77 -3.09 -10.06 -9.97 -6.08 -6.96 -7.01 -6.77 -6.7 -6.76 -4.49 -5.95 -6.53 -5.27 4.41 -7.47
AMTR_s00159p00066740 (evm_27.TU.AmTr_v1.0_scaffold00159.26)
- - - - -1.39 - - - - - - - - - -2.23 - - - - - 4.42 -
-8.39 -7.5 -6.96 -4.42 -8.05 -7.26 -14.91 -5.9 -11.69 -12.37 -12.22 - -11.72 -11.21 -11.21 -10.91 -9.74 -6.48 -9.4 -9.07 4.45 -11.29
-8.96 -8.23 -7.58 -3.52 -9.34 -10.16 - -8.23 - - -11.97 -11.53 -12.84 -10.18 -10.29 -10.62 -10.94 -7.57 -10.13 -7.55 4.45 -13.99
-6.66 -6.65 -5.78 -2.25 -6.19 - - -4.17 - - - - - -11.04 - - - -6.32 - -8.08 4.44 -
-9.29 -8.75 -7.65 -4.71 -8.74 -10.05 -15.73 -9.2 -14.83 -16.75 -9.73 -10.53 -12.15 -10.07 -9.67 -11.36 -10.5 -6.68 -8.81 -7.2 4.45 -12.98
AMTR_s00334p00011530 (evm_27.TU.AmTr_v1.0_scaffold00334.2)
-6.15 -6.83 -6.3 0.55 -3.7 -5.52 -11.54 -4.64 -9.79 -10.26 -7.36 -7.91 -8.75 -7.36 -6.94 -5.54 -6.23 -6.88 -7.91 -5.85 4.34 -8.23
-4.37 -4.21 -3.37 -3.83 -3.58 -4.11 -11.85 -4.88 -11.46 -11.07 -7.9 -7.97 -8.58 -7.24 -7.6 -6.88 -6.59 -6.02 -7.47 -5.15 4.42 -8.43
AMTR_s00343p00004460 (evm_27.TU.AmTr_v1.0_scaffold00343.1)
- - - - - - - - - - - - - - - - - - - - 4.46 -
AMTR_s00343p00010490 (evm_27.TU.AmTr_v1.0_scaffold00343.3)
- - - - - - - - - - - - - - - - - - - - 4.46 -
-9.61 -9.0 -8.32 -5.89 -10.55 -7.13 -17.61 -8.57 -16.88 -15.26 -10.77 -10.24 -13.37 -12.14 -11.72 -10.3 -11.48 -7.1 -9.76 -9.42 4.46 -12.99
-1.92 -1.85 -2.37 -2.49 -1.65 -3.61 -12.98 -3.65 -11.3 -9.59 -5.92 -6.32 -7.87 -7.17 -6.07 -8.47 -4.85 -4.75 -6.0 -3.93 4.35 -7.69
-4.68 -6.07 -3.61 -2.82 -2.44 -9.69 -10.99 -5.99 -12.18 -11.34 -7.62 - -8.73 -6.85 -6.34 -6.42 -5.56 -6.05 -6.61 -5.41 4.42 -8.2
AMTR_s00390p00012910 (evm_27.TU.AmTr_v1.0_scaffold00390.4)
-2.68 -1.76 -2.79 -1.34 -1.65 -1.84 -8.5 -1.97 -8.53 -7.24 -6.11 -6.73 -7.59 -6.05 -5.39 -6.12 -4.99 -5.75 -7.61 -4.37 4.32 -7.02
AMTR_s00390p00014170 (evm_27.TU.AmTr_v1.0_scaffold00390.5)
-2.1 -0.92 -1.92 0.63 -1.18 -3.03 - -2.45 -10.2 -9.7 -5.78 -7.1 -7.85 -5.82 -5.12 -5.34 -3.86 -7.29 -7.27 -4.6 4.21 -7.35
AMTR_s00456p00012010 (evm_27.TU.AmTr_v1.0_scaffold00456.1)
- -5.45 -2.23 -2.9 -5.28 -3.43 - -4.27 - -4.0 - - - - -6.54 - - - -3.95 - 4.41 -
AMTR_s00543p00012290 (evm_27.TU.AmTr_v1.0_scaffold00543.3)
-4.18 -6.51 -2.3 -0.96 -3.44 - - -4.33 - -8.88 -8.13 - -7.95 -7.46 -6.54 -6.82 -5.35 - -6.42 -6.76 4.39 -7.42
AMTR_s00585p00000100 (evm_27.TU.AmTr_v1.0_scaffold00585.1)
-2.42 -3.08 -3.82 -1.8 -1.7 -6.08 -11.95 -6.22 -11.46 -10.58 -7.92 -9.25 -7.38 -6.85 -5.26 -5.86 -6.11 -5.54 -5.83 -3.94 4.38 -7.8
AMTR_s00585p00011490 (evm_27.TU.AmTr_v1.0_scaffold00585.3)
0.12 -1.16 -3.49 1.03 -0.86 -5.54 -10.18 -0.56 - -9.17 - - -6.19 -5.38 -4.01 -4.48 -5.52 - - -4.32 4.07 -6.39
AMTR_s00606p00000120 (evm_27.TU.AmTr_v1.0_scaffold00606.1)
- -3.37 -3.94 -2.08 -3.8 -3.49 -8.89 -5.0 -7.49 -7.65 -4.0 -5.42 -4.64 -4.66 -4.81 -4.97 -3.92 -4.28 -4.91 -4.74 4.39 -6.34
AMTR_s00606p00006850 (evm_27.TU.AmTr_v1.0_scaffold00606.2)
-7.75 -8.35 -9.87 -4.78 -7.59 - -12.56 -7.94 -12.59 -12.51 -9.47 -8.58 -10.46 -8.86 -8.47 -8.51 -8.42 -6.47 -8.72 -6.8 4.45 -11.18
AMTR_s00626p00011520 (evm_27.TU.AmTr_v1.0_scaffold00626.1)
-0.96 -2.45 - 0.7 -2.85 - -9.37 -1.68 -6.56 -5.95 -3.6 - -4.87 -4.26 -4.82 -2.48 -4.22 - -5.89 -4.0 4.22 -5.58
-1.78 -2.08 -1.88 -3.38 -2.04 -2.83 -11.11 -5.23 -10.74 -10.89 -7.24 -7.64 -8.66 -7.95 -7.67 -7.58 -5.44 -5.51 -6.64 -5.08 4.36 -9.48
AMTR_s01196p00010070 (evm_27.TU.AmTr_v1.0_scaffold01196.2)
-4.75 -5.31 -4.49 -1.15 -2.62 -4.81 -12.35 -5.03 -12.06 -11.05 -7.27 -7.47 -7.72 -6.74 -6.29 -7.94 -5.99 -4.84 -4.42 -3.52 4.39 -8.96
AMTR_s01499p00009870 (evm_27.TU.AmTr_v1.0_scaffold01499.1)
-1.27 -2.53 -1.83 -0.89 -1.86 - -8.13 -2.51 -7.66 -7.17 -5.33 -4.73 -5.61 -4.71 -4.68 -4.47 -4.17 -5.09 -5.55 -5.0 4.31 -6.37
AMTR_s02490p00007250 (evm_27.TU.AmTr_v1.0_scaffold02490.1)
-4.12 -4.58 -4.08 -0.69 -3.12 -5.72 -9.79 -1.95 -9.42 -10.5 -6.65 - -8.43 -6.45 -6.46 -5.88 -6.44 -6.35 -8.74 -5.67 4.37 -7.52
-3.43 -3.74 -3.0 1.2 -2.91 -6.4 -10.4 -3.87 -11.3 -9.84 -6.03 -6.86 -6.18 -6.09 -6.69 -5.84 -3.76 -5.89 -5.93 -3.86 4.24 -6.33
AMTR_s04036p00005710 (evm_27.TU.AmTr_v1.0_scaffold04036.1)
-5.46 -5.84 -6.24 -2.79 -3.29 -6.38 -11.4 -5.52 -11.8 -11.68 -9.53 -6.7 -8.35 -6.59 -6.27 -8.27 -6.79 -5.19 -5.83 -3.66 4.43 -8.25
AMTR_s04720p00006570 (evm_27.TU.AmTr_v1.0_scaffold04720.2)
- - - -0.27 -0.92 - - - - - - - - - -2.92 - - - - -2.83 4.35 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.