Heatmap: Cluster_53 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light - ZT1	Light - ZT3	Light - ZT5	Light - ZT7	Light - ZT9	Light - ZT11	Light - ZT13	Light - ZT15	Dark - ZT17	Dark - ZT19	Dark - ZT21	Dark - ZT23	Light - ZT25	Nutrient stress - Low nitrogen - 10%	Nutrient stress - Low phosphate - 0%	Nutrient stress - Low sulfate - 2%	Nutrient stress - Low micronutrients - 0%	Nutrient stress - NaCl - 75 mM	Nutrient stress - Mannitol - 100 mM	Nutrient stress - Control	Environmental stress - Prolonged darkness - 72h	Environmental stress - Cold - 4C	Environmental stress - Heat - 37C	Environmental stress - Control	Environmental stress - High light - 150 uE	Environmental stress - Control high light - 40 uE
Cpa\|evm.model.tig00000057.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000057.147	-	-	-	-	-	-	-	1.1	1.13	1.03	-	2.18	1.48	-	-	2.06	-	-	1.73	-	-	-	-	0.98	-	1.5
Cpa\|evm.model.tig00000057.24	-	-	-	-	-	-	-1.3	-	-	-	-	-	-0.91	-1.89	-0.39	1.5	-0.2	1.35	2.9	1.94	-	-	1.45	-0.7	0.04	1.07
Cpa\|evm.model.tig00000139.26	-3.09	-3.65	-3.0	-	-	-3.32	-2.22	-2.34	-	-	-3.26	-2.12	-3.33	0.13	1.32	2.11	1.56	1.41	2.93	1.42	-	-2.62	-	-3.33	-1.54	-1.65
Cpa\|evm.model.tig00000158.36	-0.67	-0.2	-2.81	-1.23	-0.67	-0.03	-0.86	-1.93	-0.74	-0.29	-0.87	-0.39	-0.98	-0.56	0.54	0.5	0.35	1.1	1.5	-1.19	1.04	0.33	-0.87	-0.33	0.54	0.95
Cpa\|evm.model.tig00000158.8	-	-1.45	-	-0.95	-	-	-1.02	1.31	-	-	-1.02	-	-	0.64	1.07	1.52	0.18	1.99	2.39	1.48	-	-0.35	-1.41	-	-	-0.29
Cpa\|evm.model.tig00000189.30	-0.32	-	-	2.09	-	-0.06	-	-	-	-	-0.38	-0.22	-	-	-	1.97	-	0.34	-	-0.69	1.04	1.2	-	0.29	1.2	2.24
Cpa\|evm.model.tig00000246.29	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000248.48	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000270.6	-	-	-	-	-	-	-	-	1.07	-	-	-	-	-	-	3.51	-	2.68	-	2.62	-	-	-	-	-	-
Cpa\|evm.model.tig00000378.26	-	-1.92	-	-	-	-	0.3	-	-1.04	-	-	-	-1.66	-0.05	0.82	1.68	2.1	1.26	2.72	1.37	-1.03	-	-	-0.57	-1.11	-1.63
Cpa\|evm.model.tig00000383.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.58	0.66	-0.9	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000403.36	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.49	-	-	1.83	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000445.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.85	-	-	-	3.53
Cpa\|evm.model.tig00000480.9	-	-	-	3.22	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.89	1.76	-	-	2.56
Cpa\|evm.model.tig00000492.112	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.4	-	-	3.06	-	-	-	-	-	-	2.84
Cpa\|evm.model.tig00000526.10	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000581.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000760.22	1.62	-	-	-	-	-	-	-	-	-	-	1.57	-	-	-	-	-	-	3.13	-	-	-	-	-	-	3.49
Cpa\|evm.model.tig00000764.16	-1.53	-2.0	-2.32	-2.95	-0.98	-0.77	-1.68	-1.57	-2.31	-1.39	-2.89	-1.8	-1.69	1.5	1.59	1.8	1.42	1.04	1.58	1.59	-1.38	-2.71	-4.28	-4.0	-0.84	-0.43
Cpa\|evm.model.tig00000806.4	2.58	2.03	-	-	-	-	-	-	-	-	2.38	-	-	-	-	3.43	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00000850.5	1.44	-	-	-	1.64	-	-	-	1.43	-	-	-	-	-	2.19	0.92	0.18	-0.76	2.25	-	-	-0.41	-	1.21	-	0.56
Cpa\|evm.model.tig00000946.8	-	-	-	-	-	-	-	-	-	-	-	-	-	1.63	2.55	-	1.77	-	3.44	1.47	-	-	-	-	-	-
Cpa\|evm.model.tig00001182.3	0.88	-1.31	-0.66	-	0.88	-	-0.44	-	-0.85	-	0.12	-0.8	-	0.46	1.01	-0.91	-	0.41	2.44	-	1.51	0.3	-	-	0.04	1.34
Cpa\|evm.model.tig00001250.3	-	-	-	-	1.35	-	-	-	-	-	-	-	1.85	-	-	3.07	-	-	-	2.37	1.51	-	-	-	1.78	-
Cpa\|evm.model.tig00001372.6	0.15	-1.53	-0.69	-2.41	-2.07	-0.52	-0.02	-0.95	-0.49	0.3	-0.46	-0.63	-0.87	0.85	0.84	1.57	0.31	0.93	1.19	0.48	-1.89	0.09	-3.31	-1.17	0.06	0.16
Cpa\|evm.model.tig00001375.5	-2.09	-	-	-	-1.28	-	-2.08	-	-	-	-0.8	-	-	1.56	1.78	2.13	0.56	1.39	1.76	1.77	-2.05	-	-0.94	0.53	-0.95	-2.66
Cpa\|evm.model.tig00001387.10	-	-	-	-	-2.47	-	-	-	-	-	-	-	-	1.71	1.82	1.76	1.3	1.49	2.18	0.52	-1.66	0.65	-4.07	-1.47	-1.15	0.7
Cpa\|evm.model.tig00001387.11	-4.27	-	-5.33	-4.48	-3.53	-5.65	-5.55	-3.76	-5.57	-3.61	-5.63	-3.46	-5.66	1.77	2.15	1.57	0.86	0.78	2.2	1.43	-1.35	-0.12	-2.31	-0.33	0.04	-1.04
Cpa\|evm.model.tig00001387.9	-	-1.69	-	-3.36	-	-3.54	-	-	-2.38	-3.49	-3.43	-3.35	-	1.94	1.99	1.44	1.49	1.34	2.04	1.1	-1.33	-1.09	-1.59	-0.52	-1.11	-0.88
Cpa\|evm.model.tig00020553.92	-	0.43	0.29	-	1.78	-	-	-	-	0.21	-	-	-	-	-	2.27	-	0.65	1.22	-	0.91	-	1.32	-	1.96	0.87
Cpa\|evm.model.tig00020563.12	-	-	-	-	2.75	-	-	-	-	-	-	-	-	-	3.22	2.84	-	-	0.63	-	-	-	-	-	0.36	-
Cpa\|evm.model.tig00020572.27	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.32	-	2.59	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020597.2	0.55	-	-0.89	-	-0.7	-	-0.69	0.32	0.15	-	-	-	-	2.14	-0.14	1.97	1.34	-0.48	1.84	2.11	-	-	-	-	-	-
Cpa\|evm.model.tig00020603.9	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020608.3	-	2.77	-	-	-	-	2.84	-	-	-	2.56	-	-	-	-	2.61	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020608.8	-1.85	-1.85	-	-	-	0.26	-1.54	-1.96	-	-2.03	-1.04	-	-1.55	0.91	1.17	2.1	1.05	0.02	1.98	2.25	-1.16	-1.31	-0.33	-2.09	-1.63	-2.57
Cpa\|evm.model.tig00020610.51	-	-	-	-	-	0.74	-	-0.32	-	-	-	-0.25	-	1.34	-0.59	2.96	0.86	0.12	-	2.35	-	-	-	-	1.89	-
Cpa\|evm.model.tig00020693.4	-	-	2.63	-	-	-	-	-0.05	-	-	-	2.04	-	-	-	3.14	-	-	2.56	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020703.11	-	2.66	0.68	-	-	-	-	0.9	0.81	0.57	2.44	0.79	-	-	-	0.67	-	0.09	1.65	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020703.29	-	-	-	-	-	-	-	-	-	-	-	-	-	3.39	-	3.96	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020786.7	-1.17	1.08	1.64	-	-2.53	-1.09	-2.32	-1.71	-1.38	-2.55	-1.38	-3.34	-1.59	-0.61	2.84	2.67	-1.14	-0.41	-0.33	-2.52	-2.4	-1.63	-1.35	-3.53	-1.98	-2.3
Cpa\|evm.model.tig00020816.143	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020824.42	-0.23	-	-	-1.21	-0.14	-	-0.05	-	-	0.07	-1.23	-	-	1.74	1.77	1.01	-0.93	0.7	2.21	1.85	-	-	-0.5	-	-	0.62
Cpa\|evm.model.tig00020828.14	-	-	-	2.41	0.03	2.61	0.34	0.54	1.78	0.28	-	-	-	-	-	2.31	0.3	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020876.5	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020912.109	-	-	-	2.57	0.69	-	1.61	-	0.48	-	0.5	-	-	1.91	-	-	-	-	-	-	-0.49	2.56	-	0.39	-0.18	-
Cpa\|evm.model.tig00020934.11	-2.53	-2.64	-	-	-2.52	-	-	-1.01	-	-	-1.21	-0.54	-	0.08	1.96	2.94	1.29	0.11	1.93	1.34	-	-	-	0.14	-	-1.64
Cpa\|evm.model.tig00020951.3	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00020961.85	-3.0	-2.24	-	-	-0.92	-0.77	-3.13	-	-3.09	-1.86	-1.4	-	-1.03	1.8	1.23	1.68	-0.14	0.68	2.08	1.53	-0.84	-3.54	-2.52	-0.92	-2.01	1.54
Cpa\|evm.model.tig00021012.4	-0.46	0.06	0.1	0.27	-0.05	-1.22	-0.76	1.37	1.33	-0.89	-0.83	-1.26	-0.96	0.69	-1.45	1.99	0.44	-1.95	1.06	0.81	-0.76	-1.12	-	-	-1.43	-
Cpa\|evm.model.tig00021036.106	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021036.68	-	-	-0.83	-	-	-	-0.82	-	-0.84	-	-	-	-	2.21	2.13	1.46	1.95	-	1.62	1.67	-	-1.08	-	-0.23	-	0.18
Cpa\|evm.model.tig00021036.77	-	-	-	0.25	-0.81	2.2	1.89	1.41	-0.66	-0.79	-0.78	-	-	-0.36	-	2.73	-	-1.25	-1.06	-1.09	1.19	-	-	-	-1.32	-
Cpa\|evm.model.tig00021036.97	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021036.98	-	-	-	-	-	-	1.62	2.44	-	-	1.35	-	-	0.83	-	3.72	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021099.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021127.138	0.79	-	1.4	0.67	-	1.49	-	-	-	-	-0.38	-	-0.45	-	-	1.76	-	-1.09	-	-	0.72	0.99	-	1.14	-	2.6
Cpa\|evm.model.tig00021221.4	-	2.13	-	-	2.18	1.9	-	-	-	-	-	2.09	-	-	-	1.97	-	-	-	-	-	-	1.33	-	-	1.42
Cpa\|evm.model.tig00021254.47	-	-0.7	-	-1.99	-	-	-1.94	0.64	-	-2.06	-	-0.86	-0.51	-2.53	-	-1.06	-	1.47	1.9	0.47	0.88	-0.27	0.22	-	1.99	2.45
Cpa\|evm.model.tig00021254.52	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021326.24	-	-	-	-0.25	1.28	-	-	-	-	2.71	-	-	-	-	-0.46	2.95	0.03	-	1.03	1.0	-	-	-	-	1.44	-
Cpa\|evm.model.tig00021332.20	-	-	-	-	-	-	-	-	-	-	-	-	-	2.95	-	-	-	2.46	-	-	-	2.21	-	-	-	3.03
Cpa\|evm.model.tig00021438.13	1.56	-	-	1.65	-	-	1.58	-	1.7	-	-	-	1.47	-	-	3.14	-	-	-	-	-	-	-	-	-	1.07
Cpa\|evm.model.tig00021534.14	-	-	1.42	-	1.31	-	-	-	-	-	1.38	-	-	-	-	1.56	1.62	-	-	2.33	0.48	1.16	-	-	-	1.84
Cpa\|evm.model.tig00021536.9	-	-	-	-	1.59	0.53	-	0.51	-	-	1.55	-	-	0.46	2.83	2.6	-	-	-	0.54	-	-	0.25	-	-	-
Cpa\|evm.model.tig00021587.8	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021589.35	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021591.5	-	-0.59	-0.03	-0.49	-0.18	-1.9	0.03	-	-0.51	-1.22	-1.14	-2.04	-0.98	0.81	1.24	0.0	0.78	0.74	1.94	0.99	-	-0.06	-1.66	0.36	-0.81	0.74
Cpa\|evm.model.tig00021721.1	-	-	1.96	-	-	-	0.97	0.85	-	-	-	-	1.85	1.79	-	2.52	-	-	2.47	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021745.13	-	-	-	-	-	-	3.13	-	-	-	-	-	-	-	-	4.11	-	-	-	-	-	-	-	-	-	-
Cpa\|evm.model.tig00021758.22	-	-	-	0.91	-	-	-	-	0.88	0.78	-	-	1.27	-	-	1.81	-	0.68	-	-	1.39	-	1.45	2.01	-	1.86
Cpa\|evm.model.tig00021763.2	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.7	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.