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  5. Gb_20713

Gb_20713


Description : pepsin-type protease


Gene families : OG0000010 (Archaeplastida) Phylogenetic Tree(s): OG0000010_tree ,
OG_05_0001533 (LandPlants) Phylogenetic Tree(s): OG_05_0001533_tree ,
OG_06_0000814 (SeedPlants) Phylogenetic Tree(s): OG_06_0000814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20713
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00241440 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AMTR_s00014p00246430 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
AT1G01300 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
AT2G42980 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
GSVIVT01009155001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
GSVIVT01036015001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
Gb_08122 No alias pepsin-type protease 0.04 Archaeplastida
Gb_20723 No alias pepsin-type protease 0.03 Archaeplastida
Gb_20896 No alias pepsin-type protease 0.03 Archaeplastida
Gb_23858 No alias pepsin-type protease 0.04 Archaeplastida
Gb_25235 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os01g48750.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os03g20260.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os03g20290.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os05g51220.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os07g34850.1 No alias pepsin-type protease 0.02 Archaeplastida
MA_10180837g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_15755g0030 No alias pepsin-type protease 0.01 Archaeplastida
MA_20545g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_333359g0010 No alias pepsin-type protease 0.03 Archaeplastida
MA_85737g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_86776g0010 No alias pepsin-type protease 0.02 Archaeplastida
Pp3c15_8690V3.1 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
Pp3c26_9030V3.1 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
Pp3c3_11110V3.1 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
Smo64135 No alias Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
Solyc05g009890.1.1 No alias pepsin-type protease 0.03 Archaeplastida
Solyc06g069190.4.1 No alias pepsin-type protease 0.02 Archaeplastida
Solyc08g074917.1.1 No alias pepsin-type protease 0.03 Archaeplastida
Zm00001e022543_P004 No alias pepsin-type protease 0.02 Archaeplastida
Zm00001e023429_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e026483_P001 No alias pepsin-type protease 0.04 Archaeplastida
Zm00001e032381_P001 No alias pepsin-type protease 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032799 TAXi_C 303 457
IPR032861 TAXi_N 113 280
No external refs found!