AT1G10480 (ZFP5)

Aliases : ZFP5

Description : zinc finger protein 5

Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G10480
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00194700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	Archaeplastida
AMTR_s00057p00086480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.06	Archaeplastida
AMTR_s00079p00169240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.07	Archaeplastida
AMTR_s00088p00145510	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.06	Archaeplastida
AMTR_s00150p00049910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	Archaeplastida
AT1G13400	JGL, NUB	C2H2 and C2HC zinc fingers superfamily protein	0.05	Archaeplastida
AT3G23130	SUP, FLO10, FON1	C2H2 and C2HC zinc fingers superfamily protein	0.04	Archaeplastida
AT5G14010	KNU	C2H2 and C2HC zinc fingers superfamily protein	0.03	Archaeplastida
AT5G57520	ATZFP2, ZFP2	zinc finger protein 2	0.03	Archaeplastida
GSVIVT01011868001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.06	Archaeplastida
GSVIVT01016493001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.07	Archaeplastida
GSVIVT01031007001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.08	Archaeplastida
Gb_04808	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_12546	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Gb_26860	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os01g04120.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os02g08510.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os05g20930.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os08g44190.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os09g27320.1	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
LOC_Os11g48000.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_121523g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_2800g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_357706g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_424g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_54742g0010	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
MA_57615g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Pp3c23_960V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	Archaeplastida
Pp3c7_19440V3.1	No alias	zinc-finger protein 10	0.02	Archaeplastida
Solyc03g117070.1.1	No alias	C2H2 zinc finger transcription factor	0.07	Archaeplastida
Solyc05g006310.3.1	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Solyc05g009170.3.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Solyc05g009180.1.1	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Solyc09g011120.1.1	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Solyc09g066250.1.1	No alias	no hits & (original description: none)	0.08	Archaeplastida
Solyc10g078970.1.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Solyc10g080600.3.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Solyc10g084910.3.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc11g011890.2.1	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e000996_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e008019_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e011910_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e013845_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e016256_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e017009_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e020926_P001	No alias	C2H2 zinc finger transcription factor	0.06	Archaeplastida
Zm00001e022212_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e025746_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e032639_P001	No alias	C2H2 zinc finger transcription factor	0.08	Archaeplastida
Zm00001e034219_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e034220_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e034221_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e034223_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e034883_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e036816_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e037944_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e037946_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e040612_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e040940_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	IMP	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010026	trichome differentiation	IMP	Interproscan
BP	GO:0010026	trichome differentiation	IGI	Interproscan
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040034	regulation of development, heterochronic	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	RCA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048506	regulation of timing of meristematic phase transition	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IMP	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IEP	Neighborhood
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0002020	protease binding	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004520	endodeoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004536	deoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006308	DNA catabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006857	oligopeptide transport	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0007029	endoplasmic reticulum organization	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008422	beta-glucosidase activity	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
BP	GO:0009691	cytokinin biosynthetic process	IEP	Neighborhood
BP	GO:0009735	response to cytokinin	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010052	guard cell differentiation	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
CC	GO:0010168	ER body	IEP	Neighborhood
BP	GO:0010232	vascular transport	IEP	Neighborhood
BP	GO:0010233	phloem transport	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
MF	GO:0015926	glucosidase activity	IEP	Neighborhood
MF	GO:0015928	fucosidase activity	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016145	S-glycoside catabolic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
BP	GO:0019759	glycosinolate catabolic process	IEP	Neighborhood
BP	GO:0019762	glucosinolate catabolic process	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0033397	zeatin metabolic process	IEP	Neighborhood
BP	GO:0033398	zeatin biosynthetic process	IEP	Neighborhood
BP	GO:0033400	trans-zeatin metabolic process	IEP	Neighborhood
BP	GO:0033466	trans-zeatin biosynthetic process	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0042446	hormone biosynthetic process	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
MF	GO:0043765	T/G mismatch-specific endonuclease activity	IEP	Neighborhood
BP	GO:0044273	sulfur compound catabolic process	IEP	Neighborhood
MF	GO:0045431	flavonol synthase activity	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0050898	nitrile metabolic process	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051336	regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
MF	GO:0052642	lysophosphatidic acid phosphatase activity	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0070417	cellular response to cold	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0080027	response to herbivore	IEP	Neighborhood
BP	GO:0080028	nitrile biosynthetic process	IEP	Neighborhood
BP	GO:0080119	ER body organization	IEP	Neighborhood
BP	GO:0090408	phloem nitrate loading	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G10480 (ZFP5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation