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  5. Gb_22884

Gb_22884


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22884
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.02 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 Archaeplastida
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.02 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.04 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.02 Archaeplastida
AT5G54230 MYB49, AtMYB49 myb domain protein 49 0.03 Archaeplastida
Cpa|evm.model.tig00000246.1 No alias Transcription factor MYB3R-3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01029941001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_07139 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_15607 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g50680.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_140579g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_315620g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_362115g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_3665g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_9374017g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g07510.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp5g19050.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.02 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016072_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018391_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018415_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e036684_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041547_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003856 3-dehydroquinate synthase activity IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!