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Description : Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica (sp|q9zts1|sym_orysj : 146.0)
Gene families : OG0001682 (Archaeplastida) Phylogenetic Tree(s): OG0001682_tree ,
OG_05_0007870 (LandPlants) Phylogenetic Tree(s): OG_05_0007870_tree ,
OG_06_0009675 (SeedPlants) Phylogenetic Tree(s): OG_06_0009675_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_23258 | |
| Cluster | HCCA: Cluster_209 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre08.g364650 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | Archaeplastida | |
| Pp3c25_15060V3.1 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.03 | Archaeplastida | |
| Zm00001e040540_P001 | No alias | Probable methionine--tRNA ligase OS=Oryza sativa subsp.... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| CC | GO:0009521 | photosystem | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0032465 | regulation of cytokinesis | IEP | Neighborhood |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Neighborhood |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
| BP | GO:0051301 | cell division | IEP | Neighborhood |
| BP | GO:0051302 | regulation of cell division | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Neighborhood |
| BP | GO:1902412 | regulation of mitotic cytokinesis | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| BP | GO:1903436 | regulation of mitotic cytokinetic process | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002547 | tRNA-bd_dom | 98 | 192 |
| No external refs found! |