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  5. Gb_24349

Gb_24349


Description : xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24349
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G03103 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.09 Archaeplastida
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01001181001 No alias No description available 0.04 Archaeplastida
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01018010001 No alias No description available 0.04 Archaeplastida
GSVIVT01025408001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01029796001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_01917 No alias classical arabinogalactan protein 0.11 Archaeplastida
Gb_02441 No alias xylogen-type arabinogalactan protein 0.1 Archaeplastida
Gb_02443 No alias xylogen-type arabinogalactan protein 0.12 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02458 No alias xylogen-type arabinogalactan protein 0.1 Archaeplastida
Gb_06123 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_06428 No alias xylogen-type arabinogalactan protein 0.09 Archaeplastida
Gb_08579 No alias xylogen-type arabinogalactan protein 0.1 Archaeplastida
LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g07100.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g20760.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os03g57970.2 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os03g57980.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g58940.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g07920.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g30590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_113140g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_115537g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
MA_383975g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
MA_50191g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
MA_64802g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g21600.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Pp3c1_11030V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.02 Archaeplastida
Solyc01g005985.1.1 No alias xylogen-type arabinogalactan protein 0.08 Archaeplastida
Solyc03g005210.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc06g054030.2.1 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Solyc06g054060.1.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065410.4.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065420.3.1 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Solyc09g065430.4.1 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Solyc09g065440.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc09g082280.3.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g082290.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc09g082300.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g072030.3.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e000506_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e001521_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e005960_P003 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e005961_P001 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e006054_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e011463_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e011883_P002 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e032912_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038813_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 21 109
No external refs found!