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  5. AT2G40380

AT2G40380 (PRA1.B2)


Aliases : PRA1.B2

Description : prenylated RAB acceptor 1.B2


Gene families : OG0000503 (Archaeplastida) Phylogenetic Tree(s): OG0000503_tree ,
OG_05_0000469 (LandPlants) Phylogenetic Tree(s): OG_05_0000469_tree ,
OG_06_0001439 (SeedPlants) Phylogenetic Tree(s): OG_06_0001439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40380
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Gb_07381 No alias B-G-class Rab-GDF protein 0.04 Archaeplastida
Gb_38741 No alias B-G-class Rab-GDF protein 0.03 Archaeplastida
MA_10432013g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e012065_P001 No alias B-G-class Rab-GDF protein 0.03 Archaeplastida
Zm00001e019411_P001 No alias B-G-class Rab-GDF protein 0.04 Archaeplastida
Zm00001e023951_P001 No alias B-G-class Rab-GDF protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
BP GO:0016192 vesicle-mediated transport IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006301 postreplication repair IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0010150 leaf senescence IEP Neighborhood
BP GO:0010191 mucilage metabolic process IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
BP GO:0015804 neutral amino acid transport IEP Neighborhood
BP GO:0015824 proline transport IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP Neighborhood
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
BP GO:0080001 mucilage extrusion from seed coat IEP Neighborhood
BP GO:0090693 plant organ senescence IEP Neighborhood
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 42 185
No external refs found!