Description : component RPS11 of SSU proteome
Gene families : OG0002226 (Archaeplastida) Phylogenetic Tree(s): OG0002226_tree ,
OG_05_0057108 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0050074 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_27579 | |
Cluster | HCCA: Cluster_265 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00033p00158320 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
AMTR_s00046p00028310 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | Archaeplastida | |
AT3G48930 | EMB1080 | Nucleic acid-binding, OB-fold-like protein | 0.1 | Archaeplastida | |
AT4G30800 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.02 | Archaeplastida | |
AT5G23740 | RPS11-BETA | ribosomal protein S11-beta | 0.07 | Archaeplastida | |
Cpa|evm.model.tig00000551.22 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
Cre12.g514500 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
GSVIVT01012877001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
GSVIVT01035927001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | Archaeplastida | |
LOC_Os04g52361.1 | No alias | component RPS11 of SSU proteome | 0.1 | Archaeplastida | |
LOC_Os08g10608.1 | No alias | component RPS11 of SSU proteome | 0.06 | Archaeplastida | |
MA_19350g0010 | No alias | component RPS11 of SSU proteome | 0.09 | Archaeplastida | |
Mp4g23360.1 | No alias | component RPS11 of SSU proteome | 0.1 | Archaeplastida | |
Mp6g10500.1 | No alias | component RPS11 of SSU proteome | 0.09 | Archaeplastida | |
Pp3c14_9600V3.1 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.07 | Archaeplastida | |
Pp3c1_27980V3.1 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.12 | Archaeplastida | |
Pp3c2_13690V3.1 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.08 | Archaeplastida | |
Pp3s116_30V3.1 | No alias | Nucleic acid-binding, OB-fold-like protein | 0.07 | Archaeplastida | |
Smo268639 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
Solyc06g073790.3.1 | No alias | component RPS11 of SSU proteome | 0.07 | Archaeplastida | |
Solyc06g073800.3.1 | No alias | component RPS11 of SSU proteome | 0.08 | Archaeplastida | |
Solyc12g042080.2.1 | No alias | component RPS11 of SSU proteome | 0.07 | Archaeplastida | |
Zm00001e006955_P001 | No alias | component RPS11 of SSU proteome | 0.08 | Archaeplastida | |
Zm00001e041635_P001 | No alias | component RPS11 of SSU proteome | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0006333 | chromatin assembly or disassembly | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
No external refs found! |