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  5. AT1G02040

AT1G02040


Description : C2H2-type zinc finger family protein


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000340 (SeedPlants) Phylogenetic Tree(s): OG_06_0000340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02040
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00024970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00106p00120810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT4G35280 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
LOC_Os02g44120.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
LOC_Os04g46670.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10426425g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_858691g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc01g090830.2.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Solyc05g050860.2.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc05g055500.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e002022_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e002344_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e007312_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e023171_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e023172_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e038054_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e041518_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006108 malate metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008553 proton-exporting ATPase activity, phosphorylative mechanism IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015204 urea transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism IEP Neighborhood
BP GO:0015840 urea transport IEP Neighborhood
MF GO:0016004 phospholipase activator activity IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP Neighborhood
BP GO:0019755 one-carbon compound transport IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030427 site of polarized growth IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
CC GO:0035838 growing cell tip IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
CC GO:0044463 cell projection part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0050829 defense response to Gram-negative bacterium IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
CC GO:0051286 cell tip IEP Neighborhood
MF GO:0060229 lipase activator activity IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
CC GO:0090404 pollen tube tip IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0120038 plasma membrane bounded cell projection part IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!